Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.D02408 Eucalyptus grandis HOM05D005648 ORTHO05D029324 5.2e-72 274.2 136 100.0
Eucgr.D02395 Eucalyptus grandis HOM05D005648 ORTHO05D029324 1.2e-63 246.5 127 96.9
Eucgr.D02400 Eucalyptus grandis HOM05D005648 ORTHO05D029324 3.4e-39 165.2 85 96.5
Eucgr.D02411 Eucalyptus grandis HOM05D005648 ORTHO05D029324 1.3e-38 163.3 86 96.5
TAR375G0141 Trochodendron aralioides HOM05D005648 ORTHO05D007357 6.1e-12 74.7 83 43.4
MSTRG.20835 Avicennia marina HOM05D005648 ORTHO05D007357 1.5e-10 70.1 73 47.9
CSS0007131 Camellia sinensis var. sinensis HOM05D005648 ORTHO05D007357 2.6e-10 69.3 93 44.1
Dinv43819 Davidia involucrata HOM05D005648 ORTHO05D007357 3.3e-10 68.9 82 46.3
Prupe.2G170800 Prunus persica HOM05D005648 ORTHO05D007357 3.3e-10 68.9 84 47.6
Rhsim01G0157000 Rhododendron simsii HOM05D005648 ORTHO05D007357 2.2e-09 66.2 75 49.3
Rhsim01G0157500 Rhododendron simsii HOM05D005648 ORTHO05D007357 2.8e-09 65.9 76 48.7
CSS0009989 Camellia sinensis var. sinensis HOM05D005648 ORTHO05D007357 3.7e-09 65.5 74 47.3
MD07G1136800 Malus domestica HOM05D005648 ORTHO05D007357 3.7e-09 65.5 85 45.9
COL.COLO4_12714 Corchorus olitorius HOM05D005648 ORTHO05D007357 1.1e-08 63.9 77 41.6
Manes.01G256501 Manihot esculenta HOM05D005648 ORTHO05D007357 1.1e-08 63.9 86 38.4
FAN01G1827 Fragaria x ananassa HOM05D005648 ORTHO05D007357 1.4e-08 63.5 100 41.0
GSVIVG01026935001 Vitis vinifera HOM05D005648 ORTHO05D007357 1.4e-08 63.5 79 41.8
MD01G1061000 Malus domestica HOM05D005648 ORTHO05D007357 1.8e-08 63.2 85 43.5
Migut.B01757 Erythranthe guttata HOM05D005648 ORTHO05D007357 2.4e-08 62.8 81 46.9
FAN10G1032 Fragaria x ananassa HOM05D005648 ORTHO05D007357 2.4e-08 62.8 100 41.0
Oeu010615.1 Olea europaea HOM05D005648 ORTHO05D007357 3.1e-08 62.4 82 41.5
QL08p048767 Quercus lobata HOM05D005648 ORTHO05D007357 5.3e-08 61.6 90 41.1
Lalb_Chr10g0096921 Lupinus albus HOM05D005648 ORTHO05D007357 7.0e-08 61.2 78 39.7
FvH4_7g14300 Fragaria vesca HOM05D005648 ORTHO05D007357 9.1e-08 60.8 100 41.0
Potri.002G160100 Populus trichocarpa HOM05D005648 ORTHO05D007357 9.1e-08 60.8 81 39.5
Thecc.01G358800 Theobroma cacao HOM05D005648 ORTHO05D007357 9.1e-08 60.8 80 41.2
CiPaw.11G030900 Carya illinoinensis HOM05D005648 ORTHO05D007357 1.2e-07 60.5 83 47.0
ClCG05G001510 Citrullus lanatus HOM05D005648 ORTHO05D007357 1.2e-07 60.5 88 36.4
FAN06G1011 Fragaria x ananassa HOM05D005648 ORTHO05D007357 1.2e-07 60.5 100 41.0
FAN06G4900 Fragaria x ananassa HOM05D005648 ORTHO05D007357 1.2e-07 60.5 100 41.0
Glyma.07G070400 Glycine max HOM05D005648 ORTHO05D007357 1.5e-07 60.1 78 38.5
PGR031G0771 Punica granatum HOM05D005648 ORTHO05D007357 1.5e-07 60.1 71 43.7
RcHm_v2.0_Chr1g0355291 Rosa chinensis HOM05D005648 ORTHO05D007357 2.0e-07 59.7 97 41.2
TWI23G0553 Tripterygium wilfordii HOM05D005648 ORTHO05D007357 2.0e-07 59.7 79 39.2
Cc02_g38050 Coffea canephora HOM05D005648 ORTHO05D007357 3.4e-07 58.9 91 35.2
Haze_07444 Corylus avellana HOM05D005648 ORTHO05D007357 3.4e-07 58.9 86 40.7
Sabra14G0061500 Salix brachista HOM05D005648 ORTHO05D007357 3.4e-07 58.9 82 41.5
Dinv32486 Davidia involucrata HOM05D005648 ORTHO05D007357 4.5e-07 58.5 78 42.3
Sed0027842 Sechium edule HOM05D005648 ORTHO05D007357 4.5e-07 58.5 94 35.1
Peaxi162Scf00020g00424 Petunia axillaris HOM05D005648 ORTHO05D007357 1.7e-06 56.6 89 36.0
Lalb_Chr17g0339581 Lupinus albus HOM05D005648 ORTHO05D007357 2.2e-06 56.2 82 35.4
Duzib133G0061 Durio zibethinus HOM05D005648 ORTHO05D007357 2.9e-06 55.8 84 38.1
Gohir.D08G152800 Gossypium hirsutum HOM05D005648 ORTHO05D007357 3.8e-06 55.5 82 35.4
Glyma.03G008900 Glycine max HOM05D005648 ORTHO05D007357 5.0e-06 55.1 79 36.7
CAN.G78.81 Capsicum annuum HOM05D005648 ORTHO05D007357 6.5e-06 54.7 74 35.1
Peaxi162Scf00020g00041 Petunia axillaris HOM05D005648 ORTHO05D007357 6.5e-06 54.7 73 35.6
SHI13451 Sapria himalayana HOM05D005648 ORTHO05D007357 8.5e-06 54.3 68 41.2


User provided reference genes

Program Settings