Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.D02405 Eucalyptus grandis HOM05D024781 ORTHO05D007072 2.1e-109 399.4 267 100.0
Eucgr.D02418 Eucalyptus grandis HOM05D024781 ORTHO05D007072 1.1e-46 191.0 297 58.9
Eucgr.C00411 Eucalyptus grandis HOM05D024781 ORTHO05D007072 5.7e-38 162.2 282 57.4
Eucgr.L03184 Eucalyptus grandis HOM05D024781 ORTHO05D193950 3.2e-17 93.2 307 40.4
Eucgr.C00330 Eucalyptus grandis HOM05D000005 ORTHO05D007072 8.8e-15 85.1 292 29.5
PGR102G0126 Punica granatum HOM05D000005 ORTHO05D007072 4.4e-14 82.8 271 38.0
Eucgr.D02396 Eucalyptus grandis HOM05D000005 ORTHO05D000012 8.3e-13 78.6 197 34.0
Eucgr.D02412 Eucalyptus grandis HOM05D000005 ORTHO05D000012 1.6e-11 74.3 209 46.9
PGR102G0684 Punica granatum HOM05D000005 ORTHO05D007072 1.7e-10 70.9 168 33.9
RcHm_v2.0_Chr4g0387281 Rosa chinensis HOM05D000005 ORTHO05D000012 1.9e-09 67.4 190 28.9
Duzib268G0232 Durio zibethinus HOM05D000005 ORTHO05D000012 5.5e-09 65.9 191 46.6
RcHm_v2.0_Chr6g0251641 Rosa chinensis HOM05D000005 ORTHO05D000012 7.2e-09 65.5 202 28.7
Eucgr.C00318 Eucalyptus grandis HOM05D000005 ORTHO05D007072 9.4e-09 65.1 249 25.7
Duzib268G0652 Durio zibethinus HOM05D000005 ORTHO05D000012 1.2e-08 64.7 200 30.5
Eucgr.C02041 Eucalyptus grandis HOM05D000005 ORTHO05D007072 2.1e-08 63.9 299 33.1
FAN06G1031 Fragaria x ananassa HOM05D000005 ORTHO05D000012 3.6e-08 63.2 191 42.9
Nn8g40999 Nelumbo nucifera HOM05D000005 ORTHO05D000012 3.6e-08 63.2 151 42.4
MD01G1189200 Malus domestica HOM05D000005 ORTHO05D000012 6.1e-08 62.4 194 26.8
RcHm_v2.0_Chr1g0317981 Rosa chinensis HOM05D000005 ORTHO05D010574 1.8e-07 60.8 267 32.6
CAN.G107.21 Capsicum annuum HOM05D000005 ORTHO05D011639 3.0e-07 60.1 189 47.6
Eucgr.C02072 Eucalyptus grandis HOM05D012617 ORTHO05D007072 3.0e-07 60.1 171 30.4
Eucgr.C00572 Eucalyptus grandis HOM05D016032 ORTHO05D007072 4.0e-07 59.7 159 34.0
FAN10G3442 Fragaria x ananassa HOM05D000005 ORTHO05D000012 6.8e-07 58.9 196 43.4
Eucgr.K01874 Eucalyptus grandis HOM05D016032 ORTHO05D007072 8.8e-07 58.5 282 25.2
Eucgr.L01871 Eucalyptus grandis HOM05D000005 ORTHO05D007072 8.8e-07 58.5 156 32.7
FAN06G4475 Fragaria x ananassa HOM05D000005 ORTHO05D000012 8.8e-07 58.5 196 43.4
MD10G1136400 Malus domestica HOM05D000005 ORTHO05D000012 1.2e-06 58.2 181 27.1
Eucgr.C00528 Eucalyptus grandis HOM05D016032 ORTHO05D007072 1.5e-06 57.8 101 37.6
FAN03G0099 Fragaria x ananassa HOM05D000005 ORTHO05D000012 1.5e-06 57.8 196 43.4
MD01G1188900 Malus domestica HOM05D000005 ORTHO05D000012 1.5e-06 57.8 192 28.1
MD10G1137400 Malus domestica HOM05D000005 ORTHO05D000012 1.5e-06 57.8 181 27.1
Atru.chr10.819 Acer truncatum HOM05D000005 ORTHO05D000012 2.0e-06 57.4 185 28.1
Atru.chr10.820 Acer truncatum HOM05D000005 ORTHO05D000012 2.0e-06 57.4 185 28.1
Eucgr.C02865 Eucalyptus grandis HOM05D000005 ORTHO05D000012 2.0e-06 57.4 142 33.1
FvH4_7g28550 Fragaria vesca HOM05D000005 ORTHO05D000012 2.0e-06 57.4 196 42.9
FAN03G3405 Fragaria x ananassa HOM05D000005 ORTHO05D000012 2.0e-06 57.4 196 43.4
Eucgr.E04206 Eucalyptus grandis HOM05D000005 ORTHO05D000012 2.6e-06 57.0 78 43.6
Eucgr.E02513 Eucalyptus grandis HOM05D012617 ORTHO05D007072 3.4e-06 56.6 75 46.7
MD00G1220000 Malus domestica HOM05D000005 ORTHO05D000012 4.4e-06 56.2 273 31.5
Gohir.D01G051500 Gossypium hirsutum HOM05D000005 ORTHO05D000012 5.7e-06 55.8 212 42.9
Gohir.D11G296948 Gossypium hirsutum HOM05D000005 ORTHO05D000012 5.7e-06 55.8 190 46.3
Lj3C250G3 Lonicera japonica HOM05D000005 ORTHO05D001748 5.7e-06 55.8 214 41.6
CANSAT11G1234 Cannabis sativa HOM05D000005 ORTHO05D000012 7.5e-06 55.5 184 34.8
Ciclev10018572m.g Citrus clementina HOM05D000005 ORTHO05D000012 7.5e-06 55.5 198 46.5
MD02G1051200 Malus domestica HOM05D000005 ORTHO05D000012 7.5e-06 55.5 264 22.3
RcHm_v2.0_Chr7g0223661 Rosa chinensis HOM05D000005 ORTHO05D000012 7.5e-06 55.5 212 41.0
Eucgr.L02401 Eucalyptus grandis HOM05D016032 ORTHO05D007072 9.8e-06 55.1 129 32.6


User provided reference genes

Program Settings