Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.D02400 Eucalyptus grandis HOM05D005648 ORTHO05D029324 1.5e-92 342.8 176 100.0
Eucgr.D02411 Eucalyptus grandis HOM05D005648 ORTHO05D029324 5.2e-80 301.2 166 95.2
Eucgr.D02395 Eucalyptus grandis HOM05D005648 ORTHO05D029324 3.5e-52 208.8 112 94.6
Eucgr.D02408 Eucalyptus grandis HOM05D005648 ORTHO05D029324 7.5e-39 164.5 85 96.5
PGR031G0771 Punica granatum HOM05D005648 ORTHO05D007357 2.8e-17 92.8 152 39.5
Prupe.2G170800 Prunus persica HOM05D005648 ORTHO05D007357 3.6e-17 92.4 129 45.0
GSVIVG01026935001 Vitis vinifera HOM05D005648 ORTHO05D007357 4.0e-16 89.0 129 40.3
Thecc.01G358800 Theobroma cacao HOM05D005648 ORTHO05D007357 9.0e-16 87.8 130 40.0
MSTRG.20835 Avicennia marina HOM05D005648 ORTHO05D007357 1.2e-15 87.4 122 41.8
TAR375G0141 Trochodendron aralioides HOM05D005648 ORTHO05D007357 2.6e-15 86.3 131 38.2
MD01G1061000 Malus domestica HOM05D005648 ORTHO05D007357 3.4e-15 85.9 156 39.7
CiPaw.11G030900 Carya illinoinensis HOM05D005648 ORTHO05D007357 9.9e-15 84.3 132 43.2
CSS0009989 Camellia sinensis var. sinensis HOM05D005648 ORTHO05D007357 4.9e-14 82.0 94 48.9
Dinv43819 Davidia involucrata HOM05D005648 ORTHO05D007357 4.9e-14 82.0 136 40.4
Manes.01G256501 Manihot esculenta HOM05D005648 ORTHO05D007357 4.9e-14 82.0 126 38.1
Rhsim01G0157000 Rhododendron simsii HOM05D005648 ORTHO05D007357 4.9e-14 82.0 132 40.9
TWI23G0553 Tripterygium wilfordii HOM05D005648 ORTHO05D007357 6.4e-14 81.6 137 35.0
Potri.002G160100 Populus trichocarpa HOM05D005648 ORTHO05D007357 1.9e-13 80.1 126 37.3
QL08p048767 Quercus lobata HOM05D005648 ORTHO05D007357 1.9e-13 80.1 135 40.7
Duzib133G0061 Durio zibethinus HOM05D005648 ORTHO05D007357 2.4e-13 79.7 146 36.3
Sabra14G0061500 Salix brachista HOM05D005648 ORTHO05D007357 9.3e-13 77.8 126 38.1
Oeu010615.1 Olea europaea HOM05D005648 ORTHO05D007357 1.6e-12 77.0 158 35.4
RcHm_v2.0_Chr1g0355291 Rosa chinensis HOM05D005648 ORTHO05D007357 2.1e-12 76.6 156 35.9
Migut.B01757 Erythranthe guttata HOM05D005648 ORTHO05D007357 3.5e-12 75.9 132 37.9
Peaxi162Scf00020g00424 Petunia axillaris HOM05D005648 ORTHO05D007357 7.9e-12 74.7 107 37.4
FvH4_7g14300 Fragaria vesca HOM05D005648 ORTHO05D007357 1.0e-11 74.3 143 36.4
FAN06G4900 Fragaria x ananassa HOM05D005648 ORTHO05D007357 1.8e-11 73.6 143 36.4
Peaxi162Scf00020g00041 Petunia axillaris HOM05D005648 ORTHO05D007357 2.3e-11 73.2 107 38.3
Cc02_g38050 Coffea canephora HOM05D005648 ORTHO05D007357 3.0e-11 72.8 131 36.6
FAN01G1827 Fragaria x ananassa HOM05D005648 ORTHO05D007357 5.1e-11 72.0 136 37.5
FAN10G1032 Fragaria x ananassa HOM05D005648 ORTHO05D007357 5.1e-11 72.0 136 37.5
Potri.014G084800 Populus trichocarpa HOM05D005648 ORTHO05D007357 5.1e-11 72.0 126 36.5
CAN.G78.81 Capsicum annuum HOM05D005648 ORTHO05D007357 8.7e-11 71.2 107 37.4
FAN06G1011 Fragaria x ananassa HOM05D005648 ORTHO05D007357 8.7e-11 71.2 136 36.8
Gorai.004G158700 Gossypium raimondii HOM05D005648 ORTHO05D007357 1.9e-10 70.1 152 31.6
Glyma.07G070400 Glycine max HOM05D005648 ORTHO05D007357 5.6e-10 68.6 113 36.3
Dinv32486 Davidia involucrata HOM05D005648 ORTHO05D007357 1.3e-09 67.4 113 39.8
Gohir.A08G131300 Gossypium hirsutum HOM05D005648 ORTHO05D007357 1.3e-09 67.4 152 30.3
Manes.05G034000 Manihot esculenta HOM05D005648 ORTHO05D007357 1.6e-09 67.0 136 36.8
DCAR_006931 Daucus carota HOM05D005648 ORTHO05D007357 2.1e-09 66.6 140 35.7
Solyc01g094650.4 Solanum lycopersicum HOM05D005648 ORTHO05D007357 2.1e-09 66.6 146 30.1
Sopen01g038460 Solanum pennellii HOM05D005648 ORTHO05D007357 2.1e-09 66.6 175 29.7
MD07G1136800 Malus domestica HOM05D005648 ORTHO05D007357 3.7e-09 65.9 124 38.7
Rhsim01G0157500 Rhododendron simsii HOM05D005648 ORTHO05D007357 3.7e-09 65.9 116 39.7
CSS0007131 Camellia sinensis var. sinensis HOM05D005648 ORTHO05D007357 4.8e-09 65.5 85 47.1
Aqoxy7G00304 Aquilegia oxysepala HOM05D005648 ORTHO05D007357 1.1e-08 64.3 126 33.3
Glyma.03G008900 Glycine max HOM05D005648 ORTHO05D007357 1.1e-08 64.3 111 36.0
Lsat_1_v5_gn_4_36080 Lactuca sativa HOM05D005648 ORTHO05D007357 1.1e-08 64.3 136 36.0
COL.COLO4_12714 Corchorus olitorius HOM05D005648 ORTHO05D007357 1.4e-08 63.9 112 34.8
Nitab4.5_0006762g0020 Nicotiana tabacum HOM05D005648 ORTHO05D007357 1.4e-08 63.9 126 35.7
Sed0027842 Sechium edule HOM05D005648 ORTHO05D007357 1.4e-08 63.9 135 31.9
Lalb_Chr10g0096921 Lupinus albus HOM05D005648 ORTHO05D007357 1.5e-07 60.5 82 40.2
Thhalv10007771m.g Eutrema salsugineum HOM05D005648 ORTHO05D007357 2.0e-07 60.1 143 32.2
BraA10t42311Z Brassica rapa HOM05D005648 ORTHO05D007357 3.4e-07 59.3 118 33.1
Sp1g00620 Schrenkiella parvula HOM05D005648 ORTHO05D007357 3.4e-07 59.3 151 30.5
CDE04G3514 Ceratophyllum demersum HOM05D005648 ORTHO05D007357 7.6e-07 58.2 114 33.3
SHI13451 Sapria himalayana HOM05D005648 ORTHO05D007357 7.6e-07 58.2 110 36.4
VMungo0331G0956 Vigna mungo HOM05D005648 ORTHO05D007357 2.2e-06 56.6 119 32.8
BcaC06g31348 Brassica carinata HOM05D005648 ORTHO05D007357 3.8e-06 55.8 118 33.1
BolC5t28826H Brassica oleracea HOM05D005648 ORTHO05D007357 4.9e-06 55.5 118 31.4
Haze_07444 Corylus avellana HOM05D005648 ORTHO05D007357 6.4e-06 55.1 105 38.1
ECA234G0615 Erigeron canadensis HOM05D005648 ORTHO05D007357 6.4e-06 55.1 130 33.1


User provided reference genes

Program Settings