Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.D02388 Eucalyptus grandis HOM05D000443 ORTHO05D193472 1.4e-57 226.1 117 100.0
Eucgr.D02386 Eucalyptus grandis HOM05D000443 ORTHO05D001066 1.7e-10 69.7 33 97.0
Dinv34224 Davidia involucrata HOM05D000443 ORTHO05D001066 7.1e-09 64.3 67 56.7
Manes.05G021300 Manihot esculenta HOM05D000443 ORTHO05D001066 1.6e-08 63.2 67 55.2
RcHm_v2.0_Chr1g0360191 Rosa chinensis HOM05D000443 ORTHO05D001066 1.6e-08 63.2 58 58.6
Sabra02G0139800 Salix brachista HOM05D000443 ORTHO05D001066 1.6e-08 63.2 59 59.3
GSVIVG01027176001 Vitis vinifera HOM05D000443 ORTHO05D001066 1.6e-08 63.2 59 61.0
FvH4_7g16940 Fragaria vesca HOM05D000443 ORTHO05D001066 2.1e-08 62.8 93 44.1
FAN01G1001 Fragaria x ananassa HOM05D000443 ORTHO05D001066 2.1e-08 62.8 93 44.1
FAN10G0333 Fragaria x ananassa HOM05D000443 ORTHO05D001066 2.1e-08 62.8 93 44.1
Potri.002G173600 Populus trichocarpa HOM05D000443 ORTHO05D001066 3.5e-08 62.0 59 57.6
FAN10G1695 Fragaria x ananassa HOM05D000443 ORTHO05D001066 4.6e-08 61.6 93 43.0
CSS0004604 Camellia sinensis var. sinensis HOM05D000443 ORTHO05D001066 6.0e-08 61.2 59 59.3
FAN03G0756 Fragaria x ananassa HOM05D000443 ORTHO05D001066 6.0e-08 61.2 91 44.0
MBI18_g01157_MAGBIO Magnolia biondii HOM05D000443 ORTHO05D001066 6.0e-08 61.2 47 68.1
FAN06G3060 Fragaria x ananassa HOM05D000443 ORTHO05D001066 7.8e-08 60.8 93 43.0
MBI18_g16982_MAGBIO Magnolia biondii HOM05D000443 ORTHO05D001066 7.8e-08 60.8 33 87.9
QL09p036996 Quercus lobata HOM05D000443 ORTHO05D001066 7.8e-08 60.8 59 59.3
Lj9A600T50 Lonicera japonica HOM05D000443 ORTHO05D001066 1.0e-07 60.5 33 84.8
FAN06G0831 Fragaria x ananassa HOM05D000443 ORTHO05D001066 1.3e-07 60.1 93 43.0
Rhsim01G0174500 Rhododendron simsii HOM05D000443 ORTHO05D001066 2.3e-07 59.3 67 50.7
Sc01g0002480 Simmondsia chinensis HOM05D000443 ORTHO05D001066 3.9e-07 58.5 58 53.4
TAR375G0213 Trochodendron aralioides HOM05D000443 ORTHO05D001066 3.9e-07 58.5 58 58.6
Actinidia27559 Actinidia chinensis HOM05D000443 ORTHO05D001066 5.1e-07 58.2 67 52.2
Actinidia28111 Actinidia chinensis HOM05D000443 ORTHO05D001066 5.1e-07 58.2 67 52.2
FAN10G3488 Fragaria x ananassa HOM05D000443 ORTHO05D001278 5.1e-07 58.2 32 84.4
Prupe.2G191400 Prunus persica HOM05D000443 ORTHO05D001066 5.1e-07 58.2 59 54.2
SalBow3G1620 Salvia bowleyana HOM05D000443 ORTHO05D001066 5.1e-07 58.2 91 40.7
Ciclev10023282m.g Citrus clementina HOM05D000443 ORTHO05D001066 8.6e-07 57.4 59 55.9
MD01G1084000 Malus domestica HOM05D000443 ORTHO05D001066 8.6e-07 57.4 60 56.7
PGR031G1587 Punica granatum HOM05D000443 ORTHO05D001066 8.6e-07 57.4 59 54.2
Nn3g18932 Nelumbo nucifera HOM05D000443 ORTHO05D001066 1.1e-06 57.0 33 81.8
Oeu043221.1 Olea europaea HOM05D000443 ORTHO05D001066 1.1e-06 57.0 33 78.8
Ah.05g179370 Amaranthus hybridus HOM05D000443 ORTHO05D001066 1.9e-06 56.2 51 52.9
Haze_00505 Corylus avellana HOM05D000443 ORTHO05D001066 1.9e-06 56.2 59 57.6
Duzib133G0122 Durio zibethinus HOM05D000443 ORTHO05D001066 1.9e-06 56.2 62 54.8
THA.LOC104825887 Tarenaya hassleriana HOM05D000443 ORTHO05D001066 1.9e-06 56.2 59 55.9
EL10Ac1g00243 Beta vulgaris HOM05D000443 ORTHO05D001066 2.5e-06 55.8 58 53.4
Gohir.D08G145900 Gossypium hirsutum HOM05D000443 ORTHO05D001066 2.5e-06 55.8 62 54.8
Cfa015969 Carpinus fangiana HOM05D000443 ORTHO05D001066 4.3e-06 55.1 59 55.9
AUR62010481 Chenopodium quinoa HOM05D000443 ORTHO05D001066 5.6e-06 54.7 68 44.1
FvH4_7g21580 Fragaria vesca HOM05D000443 ORTHO05D045842 5.6e-06 54.7 56 55.4
FAN01G1190 Fragaria x ananassa HOM05D000443 ORTHO05D045842 5.6e-06 54.7 56 55.4
Gohir.A08G124900 Gossypium hirsutum HOM05D000443 ORTHO05D001066 5.6e-06 54.7 62 53.2
Gorai.004G151200 Gossypium raimondii HOM05D000443 ORTHO05D001066 5.6e-06 54.7 62 53.2
Atru.chr5.700 Acer truncatum HOM05D000443 ORTHO05D001066 7.3e-06 54.3 59 54.2
AUR62004512 Chenopodium quinoa HOM05D000443 ORTHO05D001066 7.3e-06 54.3 66 51.5
ECA246G0892 Erigeron canadensis HOM05D000443 ORTHO05D001066 7.3e-06 54.3 59 50.8


User provided reference genes

Program Settings