Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.D02210 Eucalyptus grandis HOM05D006023 ORTHO05D007377 6.0e-115 417.5 214 100.0
Cfa012466 Carpinus fangiana HOM05D006023 ORTHO05D007377 3.8e-77 292.0 199 76.4
Actinidia14795 Actinidia chinensis HOM05D006023 ORTHO05D007377 4.2e-76 288.5 196 76.0
Dinv28972 Davidia involucrata HOM05D006023 ORTHO05D007377 9.4e-76 287.3 206 74.8
CSS0050040 Camellia sinensis var. sinensis HOM05D006023 ORTHO05D007377 2.1e-75 286.2 197 76.1
CiPaw.12G065700 Carya illinoinensis HOM05D006023 ORTHO05D007377 7.9e-75 284.3 206 73.8
Hma1.2p1_1379F.1_g279210 Hydrangea macrophylla HOM05D006023 ORTHO05D007377 1.0e-74 283.9 200 74.0
PGR031G2123 Punica granatum HOM05D006023 ORTHO05D007377 1.0e-74 283.9 200 76.5
Gohir.D08G176200 Gossypium hirsutum HOM05D006023 ORTHO05D007377 1.1e-73 280.4 202 71.8
Gorai.004G184000 Gossypium raimondii HOM05D006023 ORTHO05D007377 1.1e-73 280.4 202 71.8
TAR375G0242 Trochodendron aralioides HOM05D006023 ORTHO05D007377 7.4e-73 277.7 197 73.1
Gohir.A06G181300 Gossypium hirsutum HOM05D006023 ORTHO05D007377 1.3e-72 276.9 202 70.8
Prupe.5G032500 Prunus persica HOM05D006023 ORTHO05D007377 1.3e-72 276.9 199 71.4
Gohir.D06G188100 Gossypium hirsutum HOM05D006023 ORTHO05D007377 1.7e-72 276.6 198 72.2
Manes.02G087300 Manihot esculenta HOM05D006023 ORTHO05D007377 3.7e-72 275.4 206 71.4
GSVIVG01013134001 Vitis vinifera HOM05D006023 ORTHO05D007377 8.2e-72 274.2 197 73.1
Actinidia09185 Actinidia chinensis HOM05D006023 ORTHO05D007377 1.1e-71 273.9 197 74.6
Nn5g27684 Nelumbo nucifera HOM05D006023 ORTHO05D007377 1.4e-71 273.5 197 73.6
Gorai.010G220500 Gossypium raimondii HOM05D006023 ORTHO05D007377 3.1e-71 272.3 198 71.2
Gohir.A08G155600 Gossypium hirsutum HOM05D006023 ORTHO05D007377 1.2e-70 270.4 202 69.8
Rhsim07G0128700 Rhododendron simsii HOM05D006023 ORTHO05D007377 1.7e-69 266.5 240 62.9
Atru.chr6.1650 Acer truncatum HOM05D006023 ORTHO05D007377 5.0e-69 265.0 198 69.2
Cc08_g03000 Coffea canephora HOM05D006023 ORTHO05D007377 6.5e-69 264.6 213 68.5
MELO3C021213.2 Cucumis melo HOM05D006023 ORTHO05D007377 1.5e-68 263.5 199 69.3
Hma1.2p1_0303F.1_g118960 Hydrangea macrophylla HOM05D006023 ORTHO05D007377 1.9e-68 263.1 197 70.1
SGA_v2.0_scaffold6G03147 Striga asiatica HOM05D006023 ORTHO05D007377 4.2e-68 261.9 216 68.5
CsaV3_6G000520 Cucumis sativus L. HOM05D006023 ORTHO05D007377 5.5e-68 261.5 200 69.0
RcHm_v2.0_Chr7g0210231 Rosa chinensis HOM05D006023 ORTHO05D007377 5.5e-68 261.5 215 66.5
CANSAT21G1027 Cannabis sativa HOM05D006023 ORTHO05D007377 7.2e-68 261.2 200 68.0
FvH4_5g22440 Fragaria vesca HOM05D006023 ORTHO05D007377 1.2e-67 260.4 217 67.3
Lsat_1_v5_gn_6_80341 Lactuca sativa HOM05D006023 ORTHO05D007377 2.1e-67 259.6 200 66.0
Thecc.08G177100 Theobroma cacao HOM05D006023 ORTHO05D007377 2.1e-67 259.6 198 70.7
FAN18G1789 Fragaria x ananassa HOM05D006023 ORTHO05D007377 2.7e-67 259.2 217 66.8
Lalb_Chr17g0341511 Lupinus albus HOM05D006023 ORTHO05D007377 4.7e-67 258.5 205 66.3
FAN08G2226 Fragaria x ananassa HOM05D006023 ORTHO05D007377 6.1e-67 258.1 217 66.4
Potri.003G093800 Populus trichocarpa HOM05D006023 ORTHO05D007377 6.1e-67 258.1 205 68.8
TWI81G0073 Tripterygium wilfordii HOM05D006023 ORTHO05D007377 6.1e-67 258.1 200 68.5
FAN04G1629 Fragaria x ananassa HOM05D006023 ORTHO05D007377 1.0e-66 257.3 215 66.5
FAN13G0319 Fragaria x ananassa HOM05D006023 ORTHO05D007377 1.0e-66 257.3 217 66.4
Ca_10583_v3 Cicer arietinum L. HOM05D006023 ORTHO05D007377 2.3e-66 256.1 207 66.2
Migut.F00744 Erythranthe guttata HOM05D006023 ORTHO05D007377 2.3e-66 256.1 214 64.5
RcHm_v2.0_Chr7g0210201 Rosa chinensis HOM05D006023 ORTHO05D007377 3.0e-66 255.8 197 68.5
Lj2A236G57 Lonicera japonica HOM05D006023 ORTHO05D007377 4.0e-66 255.4 205 69.3
Oeu006244.1 Olea europaea HOM05D006023 ORTHO05D007377 4.0e-66 255.4 197 68.0
arahy.Tifrunner.gnm1.ann1.T01SKW Arachis hypogaea HOM05D006023 ORTHO05D007377 6.7e-66 254.6 206 65.5
Peaxi162Scf00184g00013 Petunia axillaris HOM05D006023 ORTHO05D007377 6.7e-66 254.6 201 67.7
Aqoxy4G02643 Aquilegia oxysepala HOM05D006023 ORTHO05D007377 8.8e-66 254.2 197 66.0
arahy.Tifrunner.gnm1.ann1.NMD1RU Arachis hypogaea HOM05D006023 ORTHO05D007377 1.1e-65 253.8 206 66.0
Glyma.10G212800 Glycine max HOM05D006023 ORTHO05D007377 2.0e-65 253.1 207 64.7
arahy.Tifrunner.gnm1.ann1.7BP5M1 Arachis hypogaea HOM05D006023 ORTHO05D007377 3.3e-65 252.3 206 65.0
Nitab4.5_0004555g0010 Nicotiana tabacum HOM05D006023 ORTHO05D007377 7.5e-65 251.1 201 66.2
VMungo0720G0064 Vigna mungo HOM05D005934 ORTHO05D005165 2.2e-64 249.6 222 62.2
Hund11133 Selenicereus undatus HOM05D006023 ORTHO05D007377 4.8e-64 248.4 202 67.3
ECA240G0359 Erigeron canadensis HOM05D006023 ORTHO05D007377 6.3e-64 248.1 199 64.8
Lj5g0000896 Lotus japonicus HOM05D006023 ORTHO05D007377 6.3e-64 248.1 216 63.4
COL.COLO4_16998 Corchorus olitorius HOM05D006023 ORTHO05D007377 8.2e-64 247.7 199 67.8
Sc01g0007360 Simmondsia chinensis HOM05D006023 ORTHO05D007377 8.2e-64 247.7 205 68.8
Glyma.20G178200 Glycine max HOM05D006023 ORTHO05D007377 1.1e-63 247.3 215 63.3
MD06G1036800 Malus domestica HOM05D006023 ORTHO05D007377 1.1e-63 247.3 198 66.7
Sp6g15140 Schrenkiella parvula HOM05D006023 ORTHO05D007377 1.1e-63 247.3 201 67.2
Medtr1g095620 Medicago truncatula HOM05D006023 ORTHO05D007377 1.4e-63 246.9 205 64.4
Nitab4.5_0002808g0010 Nicotiana tabacum HOM05D006023 ORTHO05D007377 1.8e-63 246.5 190 66.3
PGSC0003DMG400027709 Solanum tuberosum HOM05D006023 ORTHO05D007377 4.1e-63 245.4 201 66.7
TPR.G1759 Trifolium pratense HOM05D006023 ORTHO05D007377 5.3e-63 245.0 182 68.1
Phvul.007G092700 Phaseolus vulgaris HOM05D006023 ORTHO05D007377 1.6e-62 243.4 206 63.6
BcaB05g21996 Brassica carinata HOM05D006023 ORTHO05D007377 4.5e-62 241.9 203 65.5
Sed0006289 Sechium edule HOM05D006023 ORTHO05D007377 4.5e-62 241.9 199 65.8
BraA02t06203Z Brassica rapa HOM05D006023 ORTHO05D007377 5.9e-62 241.5 202 65.3
Thhalv10014686m.g Eutrema salsugineum HOM05D006023 ORTHO05D007377 5.9e-62 241.5 199 66.3
Sopen08g025290 Solanum pennellii HOM05D006023 ORTHO05D007377 1.3e-61 240.4 216 62.0
THA.LOC104806716 Tarenaya hassleriana HOM05D006023 ORTHO05D007377 1.3e-61 240.4 199 64.8
MBI04_g41609_MAGBIO Magnolia biondii HOM05D006023 ORTHO05D007377 1.7e-61 240.0 197 64.0
PSO782G2387 Papaver somniferum HOM05D006023 ORTHO05D007377 1.7e-61 240.0 205 63.4
SGA_v2.0_scaffold196G40921 Striga asiatica HOM05D006023 ORTHO05D007377 2.2e-61 239.6 196 67.3
AL8G27580 Arabidopsis lyrata HOM05D006023 ORTHO05D007377 2.9e-61 239.2 203 65.5
A10p10460 Brassica napus HOM05D006023 ORTHO05D007377 3.8e-61 238.8 204 65.2
AT5G52980 Arabidopsis thaliana HOM05D006023 ORTHO05D007377 5.0e-61 238.4 182 68.7
A02p11390 Brassica napus HOM05D006023 ORTHO05D007377 5.0e-61 238.4 202 64.9
AL8G27520 Arabidopsis lyrata HOM05D006023 ORTHO05D007377 6.5e-61 238.0 206 65.0
C02p18900 Brassica napus HOM05D006023 ORTHO05D007377 6.5e-61 238.0 202 64.4
BolC2t08031H Brassica oleracea HOM05D006023 ORTHO05D007377 6.5e-61 238.0 202 64.4
C09p42690 Brassica napus HOM05D006023 ORTHO05D007377 1.1e-60 237.3 182 68.1
BolC9t57145H Brassica oleracea HOM05D006023 ORTHO05D007377 1.1e-60 237.3 182 68.1
Carub.0008s1318 Capsella rubella HOM05D006023 ORTHO05D007377 1.1e-60 237.3 207 63.8
BraA10t43129Z Brassica rapa HOM05D006023 ORTHO05D007377 2.5e-60 236.1 182 68.1
CARHR265970 Cardamine hirsuta HOM05D006023 ORTHO05D007377 2.5e-60 236.1 199 64.8
Aa31LG3G9490 Aethionema arabicum HOM05D006023 ORTHO05D007377 3.2e-60 235.7 197 65.0
PSO675G2981 Papaver somniferum HOM05D006023 ORTHO05D007377 4.2e-60 235.3 200 62.0
Cpa.g.c32853 Carica papaya HOM05D006023 ORTHO05D007377 1.2e-59 233.8 198 62.6
Sopen10g027320 Solanum pennellii HOM05D006023 ORTHO05D007377 1.2e-59 233.8 217 61.8
EL10Ac5g12082 Beta vulgaris HOM05D006023 ORTHO05D007377 2.7e-59 232.6 201 65.7
BcaC03g14468 Brassica carinata HOM05D006023 ORTHO05D007377 4.7e-59 231.9 202 64.4
DCAR_004289 Daucus carota HOM05D006023 ORTHO05D007377 1.0e-58 230.7 205 62.4
unitig_21.g20896 Utricularia gibba HOM05D006023 ORTHO05D007377 1.4e-58 230.3 202 61.4
HPP92_020908 Vanilla planifolia HOM05D006023 ORTHO05D007377 8.8e-58 227.6 198 58.1
Ah.07g200580 Amaranthus hybridus HOM05D006023 ORTHO05D007377 3.7e-56 222.2 212 60.8
PSO541G2859 Papaver somniferum HOM05D006023 ORTHO05D007377 2.4e-55 219.5 168 64.9
Hma1.2p1_0574F.1_g181560 Hydrangea macrophylla HOM05D006023 ORTHO05D007377 4.1e-55 218.8 157 71.3
Hma1.2p1_1379F.1_g279205 Hydrangea macrophylla HOM05D006023 ORTHO05D007377 4.1e-55 218.8 157 71.3
vmacro14181 Vaccinium macrocarpon HOM05D006023 ORTHO05D007377 4.1e-55 218.8 363 40.2
AL4G21070 Arabidopsis lyrata HOM05D006023 ORTHO05D007377 1.0e-53 214.2 215 58.6
ATR0665G562 Amborella trichopoda HOM05D006023 ORTHO05D007377 3.8e-53 212.2 183 60.1
Psat6g182880 Pisum sativum HOM05D006023 ORTHO05D007377 5.0e-53 211.8 151 71.5
CAN.G298.27 Capsicum annuum HOM05D006023 ORTHO05D007377 2.6e-49 199.5 140 74.3
HanXRQChr13g0414191 Helianthus annuus HOM05D006023 ORTHO05D007377 7.5e-49 198.0 155 64.5
Ciclev10022247m.g Citrus clementina HOM05D006023 ORTHO05D007377 6.3e-48 194.9 163 63.8
CDE06G2650 Ceratophyllum demersum HOM05D006023 ORTHO05D007377 1.2e-43 180.6 182 55.5
Zm00001eb024850 Zea mays HOM05D006023 ORTHO05D007377 4.0e-42 175.6 156 59.6
Duzib068G1405 Durio zibethinus HOM05D006023 ORTHO05D007377 8.3e-40 167.9 148 60.8
MSTRG.15799 Avicennia marina HOM05D006023 ORTHO05D007377 1.4e-39 167.2 118 75.4
Mapoly0102s0011 Marchantia polymorpha HOM05D006023 ORTHO05D007377 9.2e-39 164.5 199 47.7
AUR62018698 Chenopodium quinoa HOM05D006023 ORTHO05D007377 3.9e-37 159.1 124 71.0
Solyc08g076770.4 Solanum lycopersicum HOM05D006023 ORTHO05D007377 1.5e-36 157.1 145 60.0
Pp3c18_16040 Physcomitrium patens HOM05D006023 ORTHO05D007377 2.5e-36 156.4 185 45.4
PGSC0003DMG400017522 Solanum tuberosum HOM05D006023 ORTHO05D007377 9.5e-36 154.5 149 58.4
PSO063G6826 Papaver somniferum HOM05D006023 ORTHO05D007377 1.5e-33 147.1 117 68.4
CBR_g88177 Chara braunii HOM05D006023 ORTHO05D007377 1.9e-31 140.2 198 45.5
FAN18G1032 Fragaria x ananassa HOM05D006023 ORTHO05D007377 1.6e-30 137.1 145 56.6
SMO143G0066 Selaginella moellendorffii HOM05D006023 ORTHO05D007377 1.9e-28 130.2 178 41.0
ClCG06G003760 Citrullus lanatus HOM05D006023 ORTHO05D007377 4.3e-28 129.0 105 63.8
AagrBONN_evm.TU.Sc2ySwM_228.1949 Anthoceros agrestis HOM05D006023 ORTHO05D007377 1.5e-25 120.6 174 43.1
SEGI_27853 Sequoiadendron giganteum HOM05D006023 ORTHO05D007377 4.6e-22 109.0 129 49.6
Dinv25231 Davidia involucrata HOM05D006023 ORTHO05D007377 1.0e-21 107.8 63 84.1
FAN18G2414 Fragaria x ananassa HOM05D006023 ORTHO05D007377 8.6e-21 104.8 74 75.7
Solyc08g076740.4 Solanum lycopersicum HOM05D006023 ORTHO05D007377 5.2e-18 95.5 73 68.5
AUR62007305 Chenopodium quinoa HOM05D006023 ORTHO05D007377 2.9e-16 89.7 76 65.8
Cre10.g438750 Chlamydomonas reinhardtii HOM05D006023 ORTHO05D007377 3.8e-16 89.4 185 31.4
BcaNung06895 Brassica carinata HOM05D006023 ORTHO05D007377 4.9e-16 89.0 88 55.7
SEGI_36898 Sequoiadendron giganteum HOM05D006023 ORTHO05D007377 1.1e-15 87.8 63 69.8
MD16G1272600 Malus domestica HOM05D006023 ORTHO05D007377 5.1e-13 79.0 48 81.2
Solyc10g074822.1 Solanum lycopersicum HOM05D006023 ORTHO05D007377 4.3e-12 75.9 47 78.7
Os02g0225300 Oryza sativa ssp. japonica HOM05D006023 ORTHO05D007377 4.6e-06 55.8 52 48.1


User provided reference genes

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