Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.D02187 Eucalyptus grandis HOM05D006772 ORTHO05D008367 2.0e-59 232.3 117 100.0
Sabra01G0111500 Salix brachista HOM05D006772 ORTHO05D008367 1.6e-37 159.5 125 67.2
Potri.001G142700 Populus trichocarpa HOM05D006772 ORTHO05D008367 8.0e-37 157.1 125 65.6
Potri.003G091400 Populus trichocarpa HOM05D006772 ORTHO05D008367 1.4e-36 156.4 124 66.1
QL12p005804 Quercus lobata HOM05D006772 ORTHO05D008367 1.4e-36 156.4 126 64.3
COL.COLO4_17058 Corchorus olitorius HOM05D006772 ORTHO05D008367 4.0e-36 154.8 125 65.6
QL12p005837 Quercus lobata HOM05D006772 ORTHO05D008367 4.0e-36 154.8 126 63.5
Sabra03G0061100 Salix brachista HOM05D006772 ORTHO05D008367 6.8e-36 154.1 124 64.5
Gohir.D03G170700 Gossypium hirsutum HOM05D006772 ORTHO05D008367 2.0e-35 152.5 120 65.0
Gorai.003G181100 Gossypium raimondii HOM05D006772 ORTHO05D008367 2.0e-35 152.5 120 65.0
Gohir.D12G211500 Gossypium hirsutum HOM05D006772 ORTHO05D008367 9.8e-35 150.2 122 65.6
Ciclev10033079m.g Citrus clementina HOM05D006772 ORTHO05D008367 1.7e-34 149.4 126 63.5
Gohir.A12G208800 Gossypium hirsutum HOM05D006772 ORTHO05D008367 3.7e-34 148.3 122 64.8
Gorai.008G227000 Gossypium raimondii HOM05D006772 ORTHO05D008367 3.7e-34 148.3 122 64.8
CiPaw.12G062700 Carya illinoinensis HOM05D006772 ORTHO05D008367 6.3e-34 147.5 134 61.2
Medtr5g014370 Medicago truncatula HOM05D006772 ORTHO05D008367 6.3e-34 147.5 130 56.9
Nn1g00537 Nelumbo nucifera HOM05D006772 ORTHO05D008367 6.3e-34 147.5 125 64.0
arahy.Tifrunner.gnm1.ann1.6N9PAN Arachis hypogaea HOM05D006772 ORTHO05D008367 8.3e-34 147.1 127 59.1
arahy.Tifrunner.gnm1.ann1.WNGN5W Arachis hypogaea HOM05D006772 ORTHO05D008367 8.3e-34 147.1 127 59.1
Lj2g0019736 Lotus japonicus HOM05D006772 ORTHO05D008367 1.1e-33 146.7 135 56.3
Gohir.A03G001600 Gossypium hirsutum HOM05D006772 ORTHO05D008367 1.4e-33 146.4 120 65.0
Atru.chr6.1734 Acer truncatum HOM05D006772 ORTHO05D008367 2.4e-33 145.6 115 68.7
Duzib205G2036 Durio zibethinus HOM05D006772 ORTHO05D008367 2.4e-33 145.6 124 65.3
Peaxi162Scf00460g00052 Petunia axillaris HOM05D006772 ORTHO05D008367 4.1e-33 144.8 124 60.5
TAR375G0733 Trochodendron aralioides HOM05D006772 ORTHO05D008367 4.1e-33 144.8 123 62.6
Cc08_g02570 Coffea canephora HOM05D006772 ORTHO05D008367 5.4e-33 144.4 123 59.3
Haze_08246 Corylus avellana HOM05D006772 ORTHO05D008367 5.4e-33 144.4 130 61.5
Eucgr.E00285 Eucalyptus grandis HOM05D006772 ORTHO05D008367 5.4e-33 144.4 128 60.9
Glyma.11G043000 Glycine max HOM05D006772 ORTHO05D008367 5.4e-33 144.4 126 58.7
RcHm_v2.0_Chr7g0209491 Rosa chinensis HOM05D006772 ORTHO05D008367 5.4e-33 144.4 130 58.5
Thecc.03G229400 Theobroma cacao HOM05D006772 ORTHO05D008367 5.4e-33 144.4 123 63.4
Manes.17G012000 Manihot esculenta HOM05D006772 ORTHO05D008367 7.0e-33 144.1 132 61.4
Nitab4.5_0000804g0080 Nicotiana tabacum HOM05D006772 ORTHO05D008367 9.2e-33 143.7 126 58.7
CSS0016213 Camellia sinensis var. sinensis HOM05D006772 ORTHO05D008367 1.2e-32 143.3 120 63.3
Cfa012424 Carpinus fangiana HOM05D006772 ORTHO05D008367 1.2e-32 143.3 130 60.8
FvH4_5g21990 Fragaria vesca HOM05D006772 ORTHO05D008367 1.2e-32 143.3 128 58.6
FAN18G1611 Fragaria x ananassa HOM05D006772 ORTHO05D008367 1.2e-32 143.3 128 58.6
HanXRQChr03g0084031 Helianthus annuus HOM05D006772 ORTHO05D008367 1.6e-32 142.9 132 58.3
PGR042G0478 Punica granatum HOM05D006772 ORTHO05D008367 1.6e-32 142.9 129 59.7
Rhsim07G0126400 Rhododendron simsii HOM05D006772 ORTHO05D008367 1.6e-32 142.9 120 62.5
FAN04G3098 Fragaria x ananassa HOM05D006772 ORTHO05D008367 2.0e-32 142.5 128 58.6
Nn6g33607 Nelumbo nucifera HOM05D006772 ORTHO05D008367 2.0e-32 142.5 118 62.7
Solyc08g077020.1 Solanum lycopersicum HOM05D006772 ORTHO05D008367 2.7e-32 142.1 124 59.7
PGSC0003DMG400043394 Solanum tuberosum HOM05D006772 ORTHO05D008367 2.7e-32 142.1 124 59.7
FAN08G3182 Fragaria x ananassa HOM05D006772 ORTHO05D008367 3.5e-32 141.7 128 57.8
Lalb_Chr16g0379141 Lupinus albus HOM05D006772 ORTHO05D008367 3.5e-32 141.7 128 56.2
CSS0038918 Camellia sinensis var. sinensis HOM05D006772 ORTHO05D008367 4.5e-32 141.4 120 62.5
Ca_24649_v3 Cicer arietinum L. HOM05D006772 ORTHO05D008367 4.5e-32 141.4 125 56.8
Aqoxy3G02398 Aquilegia oxysepala HOM05D006772 ORTHO05D008367 5.9e-32 141.0 124 62.1
Sopen08g025600 Solanum pennellii HOM05D006772 ORTHO05D008367 5.9e-32 141.0 124 58.9
TWI15G0236 Tripterygium wilfordii HOM05D006772 ORTHO05D008367 5.9e-32 141.0 116 63.8
MD06G1033600 Malus domestica HOM05D006772 ORTHO05D008367 7.8e-32 140.6 128 59.4
Psat2g173920 Pisum sativum HOM05D006772 ORTHO05D008367 1.3e-31 139.8 132 55.3
MD16G1275100 Malus domestica HOM05D006772 ORTHO05D008367 2.3e-31 139.0 129 58.1
Lalb_Chr05g0213971 Lupinus albus HOM05D006772 ORTHO05D008367 2.9e-31 138.7 129 55.8
Phvul.002G006800 Phaseolus vulgaris HOM05D006772 ORTHO05D008367 2.9e-31 138.7 128 57.0
Glyma.05G111700 Glycine max HOM05D006772 ORTHO05D008367 3.8e-31 138.3 128 56.2
Nitab4.5_0001666g0010 Nicotiana tabacum HOM05D006772 ORTHO05D008367 3.8e-31 138.3 124 56.5
Hma1.2p1_0991F.1_g245070 Hydrangea macrophylla HOM05D006772 ORTHO05D008367 5.0e-31 137.9 122 60.7
Glyma.17G155300 Glycine max HOM05D006772 ORTHO05D008367 6.6e-31 137.5 133 53.4
VMungo1215G2403 Vigna mungo HOM05D006772 ORTHO05D008367 6.6e-31 137.5 128 55.5
TWI60G0285 Tripterygium wilfordii HOM05D006772 ORTHO05D008367 8.6e-31 137.1 116 61.2
CANSAT21G2446 Cannabis sativa HOM05D006772 ORTHO05D008367 2.5e-30 135.6 136 53.7
Lsat_1_v5_gn_6_78680 Lactuca sativa HOM05D006772 ORTHO05D008367 9.5e-30 133.7 136 54.4
Prupe.5G037100 Prunus persica HOM05D006772 ORTHO05D008367 1.6e-29 132.9 126 59.5
DCAR_024967 Daucus carota HOM05D006772 ORTHO05D008367 2.1e-29 132.5 129 60.5
Sc01g0007510 Simmondsia chinensis HOM05D006772 ORTHO05D008367 3.6e-29 131.7 125 59.2
TPR.G7824 Trifolium pratense HOM05D006772 ORTHO05D008367 4.7e-29 131.3 124 55.6
VMungo0251G2965 Vigna mungo HOM05D006772 ORTHO05D008367 6.1e-29 131.0 127 55.9
FAN13G1934 Fragaria x ananassa HOM05D006772 ORTHO05D008367 1.0e-28 130.2 121 57.9
ECA240G4560 Erigeron canadensis HOM05D000236 ORTHO05D000192 1.8e-28 129.4 119 58.8
THA.LOC104807956 Tarenaya hassleriana HOM05D006772 ORTHO05D008367 8.9e-28 127.1 119 56.3
Sed0022952 Sechium edule HOM05D006772 ORTHO05D008367 2.0e-27 125.9 129 52.7
PGR031G2239 Punica granatum HOM05D006772 ORTHO05D008367 3.4e-27 125.2 140 54.3
MELO3C003403.2 Cucumis melo HOM05D006772 ORTHO05D008367 4.4e-27 124.8 137 52.6
Gohir.A11G030300 Gossypium hirsutum HOM05D006772 ORTHO05D008367 2.9e-26 122.1 127 55.1
Lj4g0015139 Lotus japonicus HOM05D006772 ORTHO05D008367 1.1e-25 120.2 138 49.3
A05p10490 Brassica napus HOM05D006772 ORTHO05D008367 3.2e-25 118.6 121 52.9
BraA05t19987Z Brassica rapa HOM05D006772 ORTHO05D008367 3.2e-25 118.6 121 52.9
CsaV3_3G049240 Cucumis sativus L. HOM05D006772 ORTHO05D008367 3.2e-25 118.6 136 50.0
PGSC0003DMG400036785 Solanum tuberosum HOM05D006772 ORTHO05D008367 3.2e-25 118.6 103 58.3
BolC4t22934H Brassica oleracea HOM05D006772 ORTHO05D008367 7.0e-25 117.5 121 52.1
Ah.12g054950 Amaranthus hybridus HOM05D006772 ORTHO05D008367 9.2e-25 117.1 107 57.0
BcaB02g09453 Brassica carinata HOM05D006772 ORTHO05D008367 9.2e-25 117.1 121 52.1
BcaB02g09458 Brassica carinata HOM05D006772 ORTHO05D008367 9.2e-25 117.1 121 52.1
BcaB02g09462 Brassica carinata HOM05D006772 ORTHO05D008367 9.2e-25 117.1 121 52.1
BcaC02g11632 Brassica carinata HOM05D006772 ORTHO05D008367 9.2e-25 117.1 121 52.1
C04p12890 Brassica napus HOM05D006772 ORTHO05D008367 9.2e-25 117.1 121 52.1
Aa31LG9G15310 Aethionema arabicum HOM05D006772 ORTHO05D008367 2.7e-24 115.5 125 54.4
CARHR129440 Cardamine hirsuta HOM05D006772 ORTHO05D008367 2.7e-24 115.5 121 55.4
Sp4g17500 Schrenkiella parvula HOM05D006772 ORTHO05D008367 2.7e-24 115.5 121 49.6
AT2G35290 Arabidopsis thaliana HOM05D006772 ORTHO05D008367 3.5e-24 115.2 121 53.7
Sed0027084 Sechium edule HOM05D006772 ORTHO05D008367 3.5e-24 115.2 131 48.9
C04p64260 Brassica napus HOM05D006772 ORTHO05D008367 1.3e-23 113.2 121 49.6
MBI02_g14426_MAGBIO Magnolia biondii HOM05D006772 ORTHO05D008367 1.3e-23 113.2 122 54.1
A04p26870 Brassica napus HOM05D006772 ORTHO05D008367 1.7e-23 112.8 121 49.6
BraA04t18187Z Brassica rapa HOM05D006772 ORTHO05D008367 1.7e-23 112.8 121 49.6
Thhalv10017432m.g Eutrema salsugineum HOM05D006772 ORTHO05D008367 1.7e-23 112.8 121 51.2
Lj4g0019114 Lotus japonicus HOM05D006772 ORTHO05D008367 1.7e-23 112.8 133 46.6
BcaB06g28837 Brassica carinata HOM05D006772 ORTHO05D008367 3.0e-23 112.1 121 49.6
BcaB02g09448 Brassica carinata HOM05D006772 ORTHO05D008367 6.6e-23 110.9 121 47.9
Carub.0004s1698 Capsella rubella HOM05D006772 ORTHO05D008367 1.1e-22 110.2 119 52.1
BcaC02g07718 Brassica carinata HOM05D006772 ORTHO05D008367 2.5e-22 109.0 121 48.8
BolC4t27910H Brassica oleracea HOM05D006772 ORTHO05D008367 2.5e-22 109.0 121 48.8
MBI05_g46462_MAGBIO Magnolia biondii HOM05D006772 ORTHO05D008367 7.3e-22 107.5 125 45.6
AL4G31320 Arabidopsis lyrata HOM05D006772 ORTHO05D008367 1.2e-21 106.7 111 55.0
CDE02G2078 Ceratophyllum demersum HOM05D004438 ORTHO05D005256 2.8e-21 105.5 120 47.5
CDE08G0662 Ceratophyllum demersum HOM05D006772 ORTHO05D008367 2.8e-21 105.5 119 48.7
CiPaw.11G092300 Carya illinoinensis HOM05D006772 ORTHO05D008367 9.8e-19 97.1 117 47.9
Gohir.D11G028900 Gossypium hirsutum HOM05D006772 ORTHO05D008367 3.7e-18 95.1 100 53.0
HPP92_011259 Vanilla planifolia HOM05D006772 ORTHO05D008367 6.4e-18 94.4 118 48.3
ATR0564G457 Amborella trichopoda HOM05D006772 ORTHO05D008367 1.1e-17 93.6 146 42.5
Dinv28946 Davidia involucrata HOM05D006772 ORTHO05D008367 4.6e-16 88.2 69 65.2
Os03g0170100 Oryza sativa ssp. japonica HOM05D006772 ORTHO05D008367 4.6e-16 88.2 115 47.8
Peaxi162Scf00102g00514 Petunia axillaris HOM05D006772 ORTHO05D008367 4.6e-16 88.2 118 43.2
SEGI_37864 Sequoiadendron giganteum HOM05D006772 ORTHO05D008367 7.8e-16 87.4 93 50.5
Zm00001eb402290 Zea mays HOM05D006772 ORTHO05D008367 1.3e-15 86.7 117 43.6
Gorai.007G031500 Gossypium raimondii HOM05D006772 ORTHO05D008367 2.5e-14 82.4 92 50.0
EL10Ac5g12135 Beta vulgaris HOM05D003523 ORTHO05D008367 2.2e-10 69.3 93 47.3
MBI02_g18931_MAGBIO Magnolia biondii HOM05D006772 ORTHO05D008367 3.2e-09 65.5 120 38.3
SEGI_18606 Sequoiadendron giganteum HOM05D006772 ORTHO05D008367 1.2e-08 63.5 106 36.8
Mapoly0047s0021 Marchantia polymorpha HOM05D001618 ORTHO05D001486 1.0e-07 60.5 91 30.8
Phvul.009G223900 Phaseolus vulgaris HOM05D001618 ORTHO05D001486 1.7e-07 59.7 110 29.1
VMungo1309G1696 Vigna mungo HOM05D001618 ORTHO05D001486 6.6e-07 57.8 109 28.4
Lj6g0007042 Lotus japonicus HOM05D001618 ORTHO05D001486 3.3e-06 55.5 112 28.6
Medtr2g044020 Medicago truncatula HOM05D001618 ORTHO05D001486 4.3e-06 55.1 116 31.0


User provided reference genes

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