Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.D02180 Eucalyptus grandis HOM05D006861 ORTHO05D008620 4.4e-124 448.0 225 100.0
GSVIVG01013176001 Vitis vinifera HOM05D006861 ORTHO05D008620 1.7e-83 313.2 212 73.6
Prupe.5G041200 Prunus persica HOM05D006861 ORTHO05D008620 2.9e-83 312.4 215 72.6
Dinv28930 Davidia involucrata HOM05D006861 ORTHO05D008620 7.1e-82 307.8 226 70.8
QL12p006269 Quercus lobata HOM05D006861 ORTHO05D008620 1.2e-81 307.0 229 69.9
FvH4_5g21620 Fragaria vesca HOM05D006861 ORTHO05D008620 3.5e-81 305.4 213 73.2
Medtr4g098640 Medicago truncatula HOM05D006861 ORTHO05D008620 3.5e-81 305.4 214 72.9
RcHm_v2.0_Chr7g0209081 Rosa chinensis HOM05D006861 ORTHO05D008620 7.8e-81 304.3 213 73.7
Glyma.05G113600 Glycine max HOM05D006861 ORTHO05D008620 1.0e-80 303.9 216 70.8
Cfa012408 Carpinus fangiana HOM05D006861 ORTHO05D008620 1.3e-80 303.5 213 73.7
Glyma.17G153700 Glycine max HOM05D006861 ORTHO05D008620 1.3e-80 303.5 216 70.8
Haze_08270 Corylus avellana HOM05D006861 ORTHO05D008620 2.3e-80 302.8 213 73.7
DCAR_008287 Daucus carota HOM05D006861 ORTHO05D008620 3.9e-80 302.0 213 69.5
arahy.Tifrunner.gnm1.ann1.A00F14 Arachis hypogaea HOM05D006861 ORTHO05D008620 6.6e-80 301.2 221 68.8
FAN18G0349 Fragaria x ananassa HOM05D006861 ORTHO05D008620 6.6e-80 301.2 210 72.9
TAR629G3318 Trochodendron aralioides HOM05D006861 ORTHO05D008620 8.6e-80 300.8 217 71.9
arahy.Tifrunner.gnm1.ann1.P9U8RJ Arachis hypogaea HOM05D006861 ORTHO05D008620 1.1e-79 300.4 221 68.3
Lj4g0014575 Lotus japonicus HOM05D006861 ORTHO05D008620 1.5e-79 300.1 214 70.6
MD06G1031100 Malus domestica HOM05D006861 ORTHO05D008620 1.5e-79 300.1 212 72.2
Thecc.03G231500 Theobroma cacao HOM05D006861 ORTHO05D008620 1.9e-79 299.7 221 67.9
Potri.003G089400 Populus trichocarpa HOM05D006861 ORTHO05D008620 3.3e-79 298.9 210 71.9
TPR.G28655 Trifolium pratense HOM05D006861 ORTHO05D008620 3.3e-79 298.9 224 67.9
ATR0049G013 Amborella trichopoda HOM05D006861 ORTHO05D008620 5.6e-79 298.1 216 66.7
CANSAT21G0325 Cannabis sativa HOM05D006861 ORTHO05D008620 9.5e-79 297.4 218 67.4
FAN04G0264 Fragaria x ananassa HOM05D006861 ORTHO05D008620 1.2e-78 297.0 212 72.2
Duzib205G0961 Durio zibethinus HOM05D006861 ORTHO05D008620 1.6e-78 296.6 221 68.3
CSS0041220 Camellia sinensis var. sinensis HOM05D006861 ORTHO05D008620 2.1e-78 296.2 219 68.0
Manes.17G013800 Manihot esculenta HOM05D006861 ORTHO05D008620 2.1e-78 296.2 224 69.6
CSS0014670 Camellia sinensis var. sinensis HOM05D006861 ORTHO05D008620 2.8e-78 295.8 219 68.0
Hma1.2p1_0585F.1_g183570 Hydrangea macrophylla HOM05D006861 ORTHO05D008620 3.6e-78 295.4 212 69.3
Psat4g079280 Pisum sativum HOM05D006861 ORTHO05D008620 3.6e-78 295.4 216 69.0
ClCG10G001830 Citrullus lanatus HOM05D006861 ORTHO05D008620 4.7e-78 295.0 217 68.7
Gohir.A12G209800 Gossypium hirsutum HOM05D006861 ORTHO05D008620 4.7e-78 295.0 221 67.9
Actinidia14818 Actinidia chinensis HOM05D006861 ORTHO05D008620 6.2e-78 294.7 212 69.3
CiPaw.11G090800 Carya illinoinensis HOM05D006861 ORTHO05D008620 8.1e-78 294.3 213 70.4
VMungo0251G0361 Vigna mungo HOM05D006861 ORTHO05D008620 8.1e-78 294.3 214 70.1
FAN08G0129 Fragaria x ananassa HOM05D006861 ORTHO05D008620 1.1e-77 293.9 213 71.8
Ca_22062_v3 Cicer arietinum L. HOM05D006861 ORTHO05D008620 1.8e-77 293.1 224 66.1
AUR62007255 Chenopodium quinoa HOM05D006861 ORTHO05D008620 4.0e-77 292.0 209 69.4
Duzib068G0493 Durio zibethinus HOM05D006861 ORTHO05D008620 5.2e-77 291.6 217 67.7
Gorai.008G228100 Gossypium raimondii HOM05D006861 ORTHO05D008620 6.8e-77 291.2 232 65.1
Gohir.D12G212500 Gossypium hirsutum HOM05D006861 ORTHO05D008620 8.9e-77 290.8 221 67.0
Gohir.D03G170200 Gossypium hirsutum HOM05D006861 ORTHO05D008620 1.2e-76 290.4 221 66.5
Lalb_Chr09g0329521 Lupinus albus HOM05D006861 ORTHO05D008620 2.0e-76 289.7 214 67.3
Sed0027053 Sechium edule HOM05D006861 ORTHO05D008620 3.4e-76 288.9 218 66.5
QL12p006401 Quercus lobata HOM05D006861 ORTHO05D008620 4.4e-76 288.5 278 57.6
Gorai.003G180500 Gossypium raimondii HOM05D006861 ORTHO05D008620 5.8e-76 288.1 221 66.1
Ciclev10032685m.g Citrus clementina HOM05D006861 ORTHO05D008620 7.6e-76 287.7 223 67.7
THA.LOC104807964 Tarenaya hassleriana HOM05D006861 ORTHO05D008620 7.6e-76 287.7 216 66.2
MELO3C013865.2 Cucumis melo HOM05D006861 ORTHO05D008620 1.3e-75 287.0 217 66.8
Rhsim07G0124500 Rhododendron simsii HOM05D006861 ORTHO05D008620 1.3e-75 287.0 218 66.1
CsaV3_3G001910 Cucumis sativus L. HOM05D006861 ORTHO05D008620 1.7e-75 286.6 217 66.4
EL10Ac5g12163 Beta vulgaris HOM05D006861 ORTHO05D008620 2.2e-75 286.2 230 66.1
FAN13G1018 Fragaria x ananassa HOM05D006861 ORTHO05D008620 2.9e-75 285.8 210 70.0
Sabra03G0059200 Salix brachista HOM05D006861 ORTHO05D008620 3.7e-75 285.4 212 69.3
PSO782G3300 Papaver somniferum HOM05D006861 ORTHO05D008620 4.9e-75 285.0 218 67.4
Aqoxy3G02463 Aquilegia oxysepala HOM05D006861 ORTHO05D008620 6.4e-75 284.6 212 68.9
PSO063G6338 Papaver somniferum HOM05D006861 ORTHO05D008620 1.4e-74 283.5 218 67.0
Gohir.A03G002100 Gossypium hirsutum HOM05D006861 ORTHO05D008620 2.4e-74 282.7 221 65.2
Aa31LG9G15370 Aethionema arabicum HOM05D006861 ORTHO05D008620 3.2e-74 282.3 212 68.4
Ah.12g054700 Amaranthus hybridus HOM05D006861 ORTHO05D008620 9.2e-74 280.8 215 67.9
Nn6g33632 Nelumbo nucifera HOM05D006861 ORTHO05D008620 4.6e-73 278.5 271 56.5
COL.COLO4_17076 Corchorus olitorius HOM05D006861 ORTHO05D008620 1.0e-72 277.3 224 63.4
Sc07g0008780 Simmondsia chinensis HOM05D006861 ORTHO05D008620 1.7e-72 276.6 212 63.7
Cc08_g02400 Coffea canephora HOM05D006861 ORTHO05D008620 8.6e-72 274.2 210 66.7
Lsat_1_v5_gn_8_112001 Lactuca sativa HOM05D006861 ORTHO05D008620 8.6e-72 274.2 212 64.2
Sp4g17580 Schrenkiella parvula HOM05D006861 ORTHO05D008620 6.2e-70 268.1 215 65.1
Carub.0004s1705 Capsella rubella HOM05D006861 ORTHO05D008620 1.8e-69 266.5 220 62.7
Migut.A01006 Erythranthe guttata HOM05D006861 ORTHO05D008620 6.8e-69 264.6 212 62.3
MSTRG.12154 Avicennia marina HOM05D006861 ORTHO05D008620 1.2e-68 263.8 210 63.3
AT2G35360 Arabidopsis thaliana HOM05D006861 ORTHO05D008620 2.0e-68 263.1 221 62.0
HanXRQChr16g0511531 Helianthus annuus HOM05D006861 ORTHO05D008620 3.4e-68 262.3 212 60.4
AL4G31410 Arabidopsis lyrata HOM05D006861 ORTHO05D008620 7.6e-68 261.2 219 62.6
A05p10410 Brassica napus HOM05D006861 ORTHO05D008620 9.9e-68 260.8 212 62.3
SalBow6G5529 Salvia bowleyana HOM05D006861 ORTHO05D008620 1.7e-67 260.0 216 61.6
ECA233G2855 Erigeron canadensis HOM05D006861 ORTHO05D008620 2.2e-67 259.6 212 62.3
Nitab4.5_0000535g0140 Nicotiana tabacum HOM05D006861 ORTHO05D008620 2.9e-67 259.2 216 58.8
Thhalv10017211m.g Eutrema salsugineum HOM05D006861 ORTHO05D008620 4.9e-67 258.5 215 62.8
BraA05t19976Z Brassica rapa HOM05D006861 ORTHO05D008620 6.4e-67 258.1 215 62.3
BcaB02g09437 Brassica carinata HOM05D006861 ORTHO05D008620 8.4e-67 257.7 215 62.3
BolC4t22928H Brassica oleracea HOM05D006861 ORTHO05D008620 8.4e-67 257.7 215 62.3
SGA_v2.0_scaffold198G41105 Striga asiatica HOM05D006861 ORTHO05D008620 8.4e-67 257.7 212 61.3
Nitab4.5_0007026g0050 Nicotiana tabacum HOM05D006861 ORTHO05D008620 1.1e-66 257.3 234 58.5
BcaC02g11640 Brassica carinata HOM05D006861 ORTHO05D008620 1.4e-66 256.9 215 62.3
C04p12840 Brassica napus HOM05D006861 ORTHO05D008620 1.4e-66 256.9 215 62.3
vmacro14159 Vaccinium macrocarpon HOM05D006861 ORTHO05D008620 3.2e-66 255.8 207 63.8
CARHR129520 Cardamine hirsuta HOM05D006861 ORTHO05D008620 5.4e-66 255.0 216 62.0
AUR62018744 Chenopodium quinoa HOM05D006861 ORTHO05D008620 7.1e-66 254.6 216 61.1
HPP92_027725 Vanilla planifolia HOM05D006861 ORTHO05D008620 7.8e-65 251.1 226 57.1
HPP92_028475 Vanilla planifolia HOM05D006861 ORTHO05D008620 7.8e-65 251.1 227 56.4
PGSC0003DMG400020500 Solanum tuberosum HOM05D006861 ORTHO05D008620 1.0e-64 250.8 216 58.3
CDE12G0071 Ceratophyllum demersum HOM05D006861 ORTHO05D008620 1.3e-64 250.4 191 62.8
Peaxi162Scf00102g00630 Petunia axillaris HOM05D006861 ORTHO05D008620 1.7e-64 250.0 224 56.7
CAN.G845.34 Capsicum annuum HOM05D006861 ORTHO05D008620 6.6e-64 248.1 222 56.3
Solyc08g007030.3 Solanum lycopersicum HOM05D006861 ORTHO05D008620 1.5e-63 246.9 216 57.4
Sopen08g002990 Solanum pennellii HOM05D006861 ORTHO05D008620 7.3e-63 244.6 216 56.9
SEGI_11276 Sequoiadendron giganteum HOM05D006861 ORTHO05D008620 3.6e-62 242.3 215 55.8
Zm00001eb307090 Zea mays HOM05D006861 ORTHO05D008620 2.4e-61 239.6 228 56.6
TWI60G1564 Tripterygium wilfordii HOM05D006861 ORTHO05D008620 1.2e-60 237.3 216 59.3
Os09g0573100 Oryza sativa ssp. japonica HOM05D006861 ORTHO05D008620 7.6e-60 234.6 226 54.9
Phvul.003G229300 Phaseolus vulgaris HOM05D006861 ORTHO05D008620 9.3e-58 227.6 158 71.5
Hma1.2p1_0585F.1_g183580 Hydrangea macrophylla HOM05D006861 ORTHO05D008620 2.7e-57 226.1 210 57.6
Lj2A243G18 Lonicera japonica HOM05D006861 ORTHO05D008620 3.9e-56 222.2 148 73.6
Actinidia09224 Actinidia chinensis HOM05D006861 ORTHO05D008620 6.9e-53 211.5 139 72.7
Cpa.g.sc90.59 Carica papaya HOM05D006861 ORTHO05D008620 1.5e-52 210.3 145 69.7
Gohir.A09G039700 Gossypium hirsutum HOM05D006861 ORTHO05D008620 2.6e-52 209.5 154 69.5
Dinv25198 Davidia involucrata HOM05D006861 ORTHO05D008620 9.9e-52 207.6 142 72.5
Pp3c1_27050 Physcomitrium patens HOM05D006861 ORTHO05D008620 1.0e-48 197.6 214 48.6
Hma1.2p1_2232F.1_g317620 Hydrangea macrophylla HOM05D006861 ORTHO05D008620 4.9e-43 178.7 211 48.3
HanXRQChr16g0517491 Helianthus annuus HOM05D006861 ORTHO05D008620 6.3e-38 161.8 117 63.2
Atru.BG.44.p Acer truncatum HOM05D006861 ORTHO05D008620 2.6e-36 156.4 114 66.7
CBR_g57857 Chara braunii HOM05D006861 ORTHO05D008620 9.7e-31 137.9 189 45.0
Cre12.g533400 Chlamydomonas reinhardtii HOM05D006861 ORTHO05D008620 3.7e-14 82.8 183 32.2
Gohir.A01G114301 Gossypium hirsutum HOM05D006861 ORTHO05D008620 2.9e-11 73.2 65 56.9
PRCOL_00000188 Prasinoderma coloniale HOM05D006861 ORTHO05D008620 1.4e-08 64.3 138 29.7
MCO13G047 Micromonas commoda HOM05D006861 ORTHO05D008620 1.5e-07 60.8 219 27.9


User provided reference genes

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