Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.D02148 Eucalyptus grandis HOM05D005771 ORTHO05D007173 7.7e-203 710.3 369 100.0
PGR031G0896 Punica granatum HOM05D005771 ORTHO05D007173 2.3e-114 416.4 363 62.3
Cfa012362 Carpinus fangiana HOM05D005771 ORTHO05D007173 4.4e-105 385.6 367 57.8
Dinv25170 Davidia involucrata HOM05D005771 ORTHO05D007173 2.2e-104 383.3 370 58.1
Prupe.5G050200 Prunus persica HOM05D005771 ORTHO05D007173 2.0e-102 376.7 365 57.3
CANSAT21G2176 Cannabis sativa HOM05D005771 ORTHO05D007173 5.9e-102 375.2 351 58.4
Hma1.2p1_0414F.1_g147560 Hydrangea macrophylla HOM05D005771 ORTHO05D007173 2.9e-101 372.9 353 58.4
MD06G1043400 Malus domestica HOM05D005771 ORTHO05D007173 3.8e-101 372.5 368 57.3
CiPaw.11G085900 Carya illinoinensis HOM05D005771 ORTHO05D007173 1.5e-100 370.5 375 57.6
Potri.001G148500 Populus trichocarpa HOM05D005771 ORTHO05D007173 1.9e-100 370.2 360 58.1
MD16G1267400 Malus domestica HOM05D005771 ORTHO05D007173 6.1e-99 365.2 369 55.3
Atru.chr9.1139 Acer truncatum HOM05D005771 ORTHO05D007173 8.0e-99 364.8 375 55.2
QL12p007731 Quercus lobata HOM05D005771 ORTHO05D007173 1.8e-98 363.6 351 54.4
Haze_08321 Corylus avellana HOM05D005771 ORTHO05D007173 6.8e-98 361.7 425 50.6
Potri.003G085901 Populus trichocarpa HOM05D005771 ORTHO05D007173 6.8e-98 361.7 358 58.1
RcHm_v2.0_Chr7g0207891 Rosa chinensis HOM05D005771 ORTHO05D007173 6.8e-98 361.7 366 57.1
Gorai.009G296800 Gossypium raimondii HOM05D005771 ORTHO05D007173 5.7e-97 358.6 344 56.1
Gohir.D05G283033 Gossypium hirsutum HOM05D005771 ORTHO05D007173 7.5e-97 358.2 344 57.0
Ciclev10020716m.g Citrus clementina HOM05D005771 ORTHO05D007173 9.7e-97 357.8 374 56.1
Duzib106G1532 Durio zibethinus HOM05D005771 ORTHO05D007173 4.8e-96 355.5 349 57.0
ClCG10G001970 Citrullus lanatus HOM05D005771 ORTHO05D007173 6.3e-96 355.1 383 53.8
Thecc.10G165100 Theobroma cacao HOM05D005771 ORTHO05D007173 1.4e-95 354.0 346 57.2
Gohir.A05G281200 Gossypium hirsutum HOM05D005771 ORTHO05D007173 4.1e-95 352.4 344 56.4
Gohir.D10G190000 Gossypium hirsutum HOM05D005771 ORTHO05D007173 7.0e-95 351.7 343 55.4
Gorai.011G213100 Gossypium raimondii HOM05D005771 ORTHO05D007173 1.6e-94 350.5 343 55.7
CiPaw.12G058800 Carya illinoinensis HOM05D005771 ORTHO05D007173 2.7e-94 349.7 377 53.3
TWI81G0410 Tripterygium wilfordii HOM05D005771 ORTHO05D007173 2.7e-94 349.7 370 53.2
Actinidia31481 Actinidia chinensis HOM05D005771 ORTHO05D007173 1.0e-93 347.8 343 56.9
Gohir.A10G183200 Gossypium hirsutum HOM05D005771 ORTHO05D007173 1.3e-93 347.4 343 55.7
TAR629G1255 Trochodendron aralioides HOM05D005771 ORTHO05D007173 1.3e-93 347.4 351 53.6
Nn6g33714 Nelumbo nucifera HOM05D005771 ORTHO05D007173 6.5e-93 345.1 349 53.6
Actinidia10872 Actinidia chinensis HOM05D005771 ORTHO05D007173 8.5e-93 344.7 370 54.1
Sed0018056 Sechium edule HOM05D005771 ORTHO05D007173 4.2e-92 342.4 362 54.4
FvH4_5g20870 Fragaria vesca HOM05D005771 ORTHO05D007173 1.0e-90 337.8 370 53.8
Manes.15G171600 Manihot esculenta HOM05D005771 ORTHO05D007173 1.4e-90 337.4 373 54.4
FAN04G1778 Fragaria x ananassa HOM05D005771 ORTHO05D007173 2.6e-89 333.2 380 52.9
TWI60G1113 Tripterygium wilfordii HOM05D005771 ORTHO05D007173 5.7e-89 332.0 353 52.1
FAN08G3334 Fragaria x ananassa HOM05D005771 ORTHO05D007173 1.3e-88 330.9 373 52.8
CsaV3_3G002100 Cucumis sativus L. HOM05D005771 ORTHO05D007173 2.8e-88 329.7 379 51.5
MSTRG.1962 Avicennia marina HOM05D005771 ORTHO05D007173 3.7e-88 329.3 341 53.1
Nitab4.5_0001444g0090 Nicotiana tabacum HOM05D005771 ORTHO05D007173 3.7e-88 329.3 369 52.6
Oeu006260.1 Olea europaea HOM05D005771 ORTHO05D007173 3.7e-88 329.3 376 52.7
FAN18G3681 Fragaria x ananassa HOM05D005771 ORTHO05D007173 6.3e-88 328.6 380 52.4
CSS0003087 Camellia sinensis var. sinensis HOM05D005771 ORTHO05D007173 8.3e-88 328.2 368 50.8
Phvul.003G227100 Phaseolus vulgaris HOM05D005771 ORTHO05D007173 2.4e-87 326.6 360 51.9
Glyma.17G150800 Glycine max HOM05D005771 ORTHO05D007173 4.1e-87 325.9 362 51.7
Hund11296 Selenicereus undatus HOM05D005771 ORTHO05D007173 4.1e-87 325.9 346 53.8
COL.COLO4_05118 Corchorus olitorius HOM05D005771 ORTHO05D007173 1.7e-85 320.5 354 50.8
Nitab4.5_0001708g0070 Nicotiana tabacum HOM05D005771 ORTHO05D007173 2.3e-85 320.1 369 50.4
Cc08_g01580 Coffea canephora HOM05D005771 ORTHO05D007173 1.5e-84 317.4 381 49.6
Lj4g0020972 Lotus japonicus HOM05D005771 ORTHO05D007173 1.9e-84 317.0 360 50.3
Sopen08g026040 Solanum pennellii HOM05D005771 ORTHO05D007173 2.5e-84 316.6 345 51.9
Solyc08g077450.4 Solanum lycopersicum HOM05D005771 ORTHO05D007173 3.3e-84 316.2 345 52.2
MELO3C013882.2 Cucumis melo HOM05D005771 ORTHO05D007173 1.2e-83 314.3 413 47.9
arahy.Tifrunner.gnm1.ann1.2CCA8K Arachis hypogaea HOM05D005771 ORTHO05D007173 3.6e-83 312.8 362 47.8
arahy.Tifrunner.gnm1.ann1.X1SA4Y Arachis hypogaea HOM05D005771 ORTHO05D007173 3.6e-83 312.8 362 47.8
Glyma.05G068200 Glycine max HOM05D005771 ORTHO05D007173 1.0e-82 311.2 364 50.8
Ca_22032_v3 Cicer arietinum L. HOM05D005771 ORTHO05D007173 2.3e-82 310.1 368 49.2
Lalb_Chr16g0386311 Lupinus albus HOM05D005771 ORTHO05D007173 1.5e-81 307.4 372 48.7
Lalb_Chr05g0220751 Lupinus albus HOM05D005771 ORTHO05D007173 3.4e-81 306.2 377 48.0
Migut.E00807 Erythranthe guttata HOM05D005771 ORTHO05D007173 7.5e-81 305.1 369 49.9
Migut.E00856 Erythranthe guttata HOM05D005771 ORTHO05D007173 1.7e-80 303.9 369 49.6
Sc01g0007800 Simmondsia chinensis HOM05D005771 ORTHO05D007173 1.7e-80 303.9 361 50.4
Aqoxy3G02583 Aquilegia oxysepala HOM05D005771 ORTHO05D007173 6.3e-80 302.0 363 49.0
SGA_v2.0_scaffold20G09242 Striga asiatica HOM05D005771 ORTHO05D007173 1.8e-79 300.4 368 48.9
Lj2g0023107 Lotus japonicus HOM05D005771 ORTHO05D007173 5.4e-79 298.9 349 49.6
TPR.G11182 Trifolium pratense HOM05D005771 ORTHO05D007173 1.6e-78 297.4 409 45.2
Sabra03G0055800 Salix brachista HOM05D005771 ORTHO05D007173 1.7e-77 293.9 399 49.9
Medtr4g099070 Medicago truncatula HOM05D005771 ORTHO05D007173 8.6e-77 291.6 370 48.1
Cpa.g.sc2.371 Carica papaya HOM05D005771 ORTHO05D007173 3.6e-75 286.2 303 55.8
AT1G32730 Arabidopsis thaliana HOM05D005771 ORTHO05D007173 2.6e-73 280.0 277 55.2
DCAR_000726 Daucus carota HOM05D005771 ORTHO05D007173 4.4e-73 279.3 381 44.1
Thhalv10008194m.g Eutrema salsugineum HOM05D005771 ORTHO05D007173 1.7e-72 277.3 343 48.4
Rhsim07G0120600 Rhododendron simsii HOM05D005771 ORTHO05D007173 9.2e-71 271.6 438 43.6
HanXRQChr12g0368601 Helianthus annuus HOM05D005771 ORTHO05D007173 2.0e-70 270.4 357 45.9
GSVIVG01013265001 Vitis vinifera HOM05D005771 ORTHO05D007173 2.7e-70 270.0 160 81.9
CDE02G0742 Ceratophyllum demersum HOM05D005771 ORTHO05D007173 3.5e-70 269.6 345 44.3
CARHR032110 Cardamine hirsuta HOM05D005771 ORTHO05D007173 7.8e-70 268.5 340 46.8
AL1G47010 Arabidopsis lyrata HOM05D005771 ORTHO05D007173 1.7e-69 267.3 277 53.4
PSO063G1478 Papaver somniferum HOM05D005771 ORTHO05D007173 2.8e-67 260.0 350 45.4
PSO782G3090 Papaver somniferum HOM05D005771 ORTHO05D007173 6.2e-67 258.8 352 46.0
VMungo0251G2395 Vigna mungo HOM05D005771 ORTHO05D007173 3.1e-66 256.5 300 50.7
Carub.0001s3106 Capsella rubella HOM05D005771 ORTHO05D007173 4.0e-66 256.1 276 52.2
DCAR_000728 Daucus carota HOM05D005771 ORTHO05D007173 1.2e-65 254.6 325 44.9
Lsat_1_v5_gn_6_67960 Lactuca sativa HOM05D005771 ORTHO05D007173 5.8e-65 252.3 301 49.5
EL10Ac5g12212 Beta vulgaris HOM05D005771 ORTHO05D007173 1.3e-64 251.1 345 46.1
C05p32200 Brassica napus HOM05D005771 ORTHO05D007173 8.3e-64 248.4 360 43.9
BolC5t31952H Brassica oleracea HOM05D005771 ORTHO05D007173 8.3e-64 248.4 360 43.9
Peaxi162Scf00084g00314 Petunia axillaris HOM05D005771 ORTHO05D007173 1.9e-63 247.3 374 42.8
ECA233G5206 Erigeron canadensis HOM05D005771 ORTHO05D007173 4.1e-63 246.1 341 44.3
Aa31LG2G13250 Aethionema arabicum HOM05D005771 ORTHO05D007173 5.4e-63 245.7 350 44.3
Sabra01G0116900 Salix brachista HOM05D005771 ORTHO05D007173 7.1e-63 245.4 306 51.6
THA.LOC104807943 Tarenaya hassleriana HOM05D005771 ORTHO05D007173 4.6e-62 242.7 358 43.6
THA.LOC104812740 Tarenaya hassleriana HOM05D005771 ORTHO05D007173 7.8e-62 241.9 360 43.1
CDE11G1022 Ceratophyllum demersum HOM05D005771 ORTHO05D007173 5.1e-61 239.2 339 41.0
HPP92_007338 Vanilla planifolia HOM05D005771 ORTHO05D007173 1.2e-59 234.6 379 43.3
Sp1g28240 Schrenkiella parvula HOM05D005771 ORTHO05D007173 2.1e-59 233.8 298 47.3
ATR0829G207 Amborella trichopoda HOM05D005771 ORTHO05D007173 8.1e-59 231.9 353 42.5
vmacro14112 Vaccinium macrocarpon HOM05D005771 ORTHO05D007173 2.3e-58 230.3 272 50.0
BcaC05g27301 Brassica carinata HOM05D005771 ORTHO05D007173 1.9e-55 220.7 372 40.3
Sabra01G0118400 Salix brachista HOM05D005771 ORTHO05D007173 3.0e-53 213.4 305 47.2
Oeu039354.1 Olea europaea HOM05D005771 ORTHO05D007173 8.6e-53 211.8 266 48.5
Psat4g077240 Pisum sativum HOM05D005771 ORTHO05D007173 3.3e-52 209.9 267 46.8
Os08g0129500 Oryza sativa ssp. japonica HOM05D005771 ORTHO05D007173 8.1e-51 205.3 382 39.3
BcaC05g27831 Brassica carinata HOM05D005771 ORTHO05D007173 2.6e-49 200.3 299 43.8
C05p38290 Brassica napus HOM05D005771 ORTHO05D007173 2.6e-49 200.3 299 43.8
BolC5t32561H Brassica oleracea HOM05D005771 ORTHO05D007173 2.6e-49 200.3 299 43.8
AUR62007206 Chenopodium quinoa HOM05D005771 ORTHO05D007173 2.2e-48 197.2 311 43.4
unitig_21.g20376 Utricularia gibba HOM05D005771 ORTHO05D007173 2.2e-48 197.2 398 39.7
Zm00001eb261700 Zea mays HOM05D005771 ORTHO05D007173 1.1e-47 194.9 368 36.4
AUR62018795 Chenopodium quinoa HOM05D005771 ORTHO05D007173 9.3e-47 191.8 312 42.3
FAN13G3323 Fragaria x ananassa HOM05D005771 ORTHO05D007173 2.7e-46 190.3 371 40.4
A05p24640 Brassica napus HOM05D005771 ORTHO05D007173 9.6e-44 181.8 302 42.7
BraA05t21350Z Brassica rapa HOM05D005771 ORTHO05D007173 9.6e-44 181.8 302 42.7
Ah.07g199650 Amaranthus hybridus HOM05D005771 ORTHO05D007173 4.9e-40 169.5 386 33.9
SEGI_22059 Sequoiadendron giganteum HOM05D005771 ORTHO05D000001 7.4e-28 129.0 316 33.9
TPR.G12459 Trifolium pratense HOM05D005771 ORTHO05D007173 1.7e-24 117.9 155 44.5
Mapoly0082s0082 Marchantia polymorpha HOM05D005771 ORTHO05D007173 4.5e-17 93.2 385 27.5
Psat4g077280 Pisum sativum HOM05D005771 ORTHO05D007173 2.2e-16 90.9 97 53.6
AagrBONN_evm.TU.Sc2ySwM_117.836 Anthoceros agrestis HOM05D005771 ORTHO05D007173 6.5e-16 89.4 301 26.9
Pp3c2_10410 Physcomitrium patens HOM05D005771 ORTHO05D007173 8.4e-16 89.0 360 26.9
SEGI_34267 Sequoiadendron giganteum HOM05D005771 ORTHO05D007173 9.3e-15 85.5 65 63.1
arahy.Tifrunner.gnm1.ann1.ARXY04 Arachis hypogaea HOM05D005771 ORTHO05D007173 1.6e-14 84.7 66 65.2
Zm00001eb173270 Zea mays HOM05D005771 ORTHO05D007173 5.7e-12 76.3 231 28.1
TAR636G0006 Trochodendron aralioides HOM05D005771 ORTHO05D007173 1.1e-10 72.0 51 64.7


User provided reference genes

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