Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.D02077 Eucalyptus grandis HOM05D008099 ORTHO05D010084 2.7e-54 215.3 127 100.0
CiPaw.12G109700 Carya illinoinensis HOM05D008099 ORTHO05D010084 7.6e-17 90.9 127 47.2
CiPaw.11G154100 Carya illinoinensis HOM05D008099 ORTHO05D010084 1.2e-14 83.6 128 44.5
Hma1.2p1_0316F.1_g123190 Hydrangea macrophylla HOM05D008099 ORTHO05D010084 2.7e-14 82.4 127 43.3
Potri.001G158100 Populus trichocarpa HOM05D008099 ORTHO05D010084 2.7e-14 82.4 127 41.7
TWI60G1554 Tripterygium wilfordii HOM05D008099 ORTHO05D010084 7.9e-14 80.9 127 42.5
Gorai.004G198900 Gossypium raimondii HOM05D008099 ORTHO05D010084 1.0e-13 80.5 127 42.5
Manes.01G080400 Manihot esculenta HOM05D008099 ORTHO05D010084 1.0e-13 80.5 132 47.7
COL.COLO4_37181 Corchorus olitorius HOM05D008099 ORTHO05D010084 1.4e-13 80.1 127 45.7
Thecc.03G251800 Theobroma cacao HOM05D008099 ORTHO05D010084 1.4e-13 80.1 127 46.5
Gohir.D12G219832 Gossypium hirsutum HOM05D008099 ORTHO05D010084 1.8e-13 79.7 130 44.6
Gorai.008G235500 Gossypium raimondii HOM05D008099 ORTHO05D010084 1.8e-13 79.7 130 44.6
Potri.003G076700 Populus trichocarpa HOM05D008099 ORTHO05D010084 1.8e-13 79.7 127 39.4
TAR627G0883 Trochodendron aralioides HOM05D008099 ORTHO05D010084 2.3e-13 79.3 127 40.2
TAR374G1517 Trochodendron aralioides HOM05D008099 ORTHO05D010084 3.0e-13 79.0 127 41.7
Hma1.2p1_0316F.1_g123200 Hydrangea macrophylla HOM05D008099 ORTHO05D010084 3.9e-13 78.6 127 42.5
Cpa.g.sc29.154 Carica papaya HOM05D008099 ORTHO05D010084 5.1e-13 78.2 127 42.5
Gohir.A12G217300 Gossypium hirsutum HOM05D008099 ORTHO05D010084 5.1e-13 78.2 130 43.8
FAN04G2136 Fragaria x ananassa HOM05D008099 ORTHO05D010084 8.8e-13 77.4 130 41.5
FAN18G4449 Fragaria x ananassa HOM05D008099 ORTHO05D010084 1.5e-12 76.6 133 43.6
Ciclev10022924m.g Citrus clementina HOM05D008099 ORTHO05D010084 3.3e-12 75.5 129 40.3
FAN18G2867 Fragaria x ananassa HOM05D008099 ORTHO05D010084 7.4e-12 74.3 133 42.9
PGSC0003DMG400012531 Solanum tuberosum HOM05D008099 ORTHO05D010084 7.4e-12 74.3 130 39.2
MD04G1064000 Malus domestica HOM05D008099 ORTHO05D010084 1.3e-11 73.6 128 39.1
Rhsim07G0108300 Rhododendron simsii HOM05D008099 ORTHO05D010084 1.7e-11 73.2 125 37.6
Solyc08g007375.1 Solanum lycopersicum HOM05D008099 ORTHO05D010084 1.7e-11 73.2 130 39.2
Sopen08g003320 Solanum pennellii HOM05D008099 ORTHO05D010084 6.3e-11 71.2 130 38.5
FvH4_5g18850 Fragaria vesca HOM05D008099 ORTHO05D010084 1.1e-10 70.5 134 42.5
Sabra01G0133400 Salix brachista HOM05D008099 ORTHO05D010084 2.4e-10 69.3 127 37.8
Actinidia05205 Actinidia chinensis HOM05D008099 ORTHO05D010084 3.1e-10 68.9 129 38.0
FAN08G3271 Fragaria x ananassa HOM05D008099 ORTHO05D010084 5.3e-10 68.2 130 36.9
DCAR_004951 Daucus carota HOM05D008099 ORTHO05D010084 6.9e-10 67.8 128 37.5
Lsat_1_v5_gn_6_91081 Lactuca sativa HOM05D008099 ORTHO05D010084 6.9e-10 67.8 125 36.8
Cfa012714 Carpinus fangiana HOM05D008099 ORTHO05D010084 9.1e-10 67.4 127 43.3
RcHm_v2.0_Chr7g0203191 Rosa chinensis HOM05D008099 ORTHO05D010084 9.1e-10 67.4 128 37.5
TAR624G1172 Trochodendron aralioides HOM05D008099 ORTHO05D010084 2.0e-09 66.2 127 38.6
Nn6g33963 Nelumbo nucifera HOM05D008099 ORTHO05D010084 3.4e-09 65.5 123 39.0
Atru.chr9.1318 Acer truncatum HOM05D008099 ORTHO05D010084 5.9e-09 64.7 103 38.8
Nn8g39479 Nelumbo nucifera HOM05D008099 ORTHO05D010084 1.7e-08 63.2 123 38.2
ECA233G2908 Erigeron canadensis HOM05D008099 ORTHO05D010084 5.0e-08 61.6 126 33.3
Sc22g0000850 Simmondsia chinensis HOM05D008099 ORTHO05D010084 5.0e-08 61.6 107 41.1
SalBow6G1675 Salvia bowleyana HOM05D008099 ORTHO05D010084 1.4e-07 60.1 128 35.9
Cc08_g12470 Coffea canephora HOM05D008099 ORTHO05D010084 1.9e-07 59.7 129 34.9
Gohir.D03G162700 Gossypium hirsutum HOM05D008099 ORTHO05D010084 1.9e-07 59.7 130 36.9
Prupe.5G069300 Prunus persica HOM05D008099 ORTHO05D010084 2.5e-07 59.3 119 37.0
Lsat_1_v5_gn_3_841 Lactuca sativa HOM05D008099 ORTHO05D010084 4.2e-07 58.5 130 34.6
Gorai.003G171300 Gossypium raimondii HOM05D008099 ORTHO05D010084 7.2e-07 57.8 130 36.2
PGSC0003DMG400035312 Solanum tuberosum HOM05D008099 ORTHO05D010084 1.2e-06 57.0 128 30.5
Solyc06g060675.1 Solanum lycopersicum HOM05D008099 ORTHO05D010084 1.6e-06 56.6 128 31.2
Sopen06g020800 Solanum pennellii HOM05D008099 ORTHO05D010084 1.6e-06 56.6 128 31.2
DCAR_027775 Daucus carota HOM05D008099 ORTHO05D010084 2.1e-06 56.2 130 33.8
Gohir.A03G008200 Gossypium hirsutum HOM05D008099 ORTHO05D010084 2.7e-06 55.8 130 36.2
Nn6g33965 Nelumbo nucifera HOM05D008099 ORTHO05D010084 2.7e-06 55.8 127 36.2
Ah.12g056830 Amaranthus hybridus HOM05D054031 ORTHO05D010084 4.7e-06 55.1 114 34.2


User provided reference genes

Program Settings