Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.D02069 Eucalyptus grandis HOM05D008102 ORTHO05D010266 1.1e-40 169.5 84 100.0
Eucgr.L01885 Eucalyptus grandis HOM05D008102 ORTHO05D010266 1.2e-39 166.0 84 97.6
Eucgr.D02071 Eucalyptus grandis HOM05D008102 ORTHO05D010266 3.0e-38 161.4 84 95.2
GSVIVG01001314001 Vitis vinifera HOM05D008102 ORTHO05D010266 1.8e-14 82.4 80 51.2
Potri.003G110500 Populus trichocarpa HOM05D008102 ORTHO05D010266 1.2e-13 79.7 84 45.2
CiPaw.11G153400 Carya illinoinensis HOM05D008102 ORTHO05D010266 2.9e-12 75.1 84 45.2
QL12p012528 Quercus lobata HOM05D008102 ORTHO05D010266 6.4e-12 73.9 80 42.5
Sabra03G0076600 Salix brachista HOM05D008102 ORTHO05D010266 1.4e-11 72.8 84 41.7
GSVIVG01006641001 Vitis vinifera HOM05D008102 ORTHO05D010266 3.2e-11 71.6 61 59.0
Manes.02G038800 Manihot esculenta HOM05D008102 ORTHO05D010266 7.1e-11 70.5 60 51.7
Thecc.03G253100 Theobroma cacao HOM05D008102 ORTHO05D010266 9.2e-11 70.1 76 48.7
Duzib084G0060 Durio zibethinus HOM05D008102 ORTHO05D010266 3.5e-10 68.2 79 44.3
DCAR_008489 Daucus carota HOM05D005079 ORTHO05D006362 6.6e-09 63.9 83 37.3
THA.LOC109116598 Tarenaya hassleriana HOM05D008102 ORTHO05D010266 1.1e-08 63.2 77 39.0
TWI81G0747 Tripterygium wilfordii HOM05D008102 ORTHO05D010266 1.5e-08 62.8 75 46.7
Gohir.A12G217600 Gossypium hirsutum HOM05D008102 ORTHO05D010266 1.9e-08 62.4 79 43.0
Gohir.D12G220100 Gossypium hirsutum HOM05D008102 ORTHO05D010266 1.9e-08 62.4 59 47.5
Gorai.008G235800 Gossypium raimondii HOM05D008102 ORTHO05D010266 1.9e-08 62.4 59 47.5
AUR62039959 Chenopodium quinoa HOM05D008102 ORTHO05D010266 1.6e-07 59.3 43 55.8
Nn6g33980 Nelumbo nucifera HOM05D008102 ORTHO05D010266 2.1e-07 58.9 40 62.5
Ah.12g056760 Amaranthus hybridus HOM05D008102 ORTHO05D010266 2.8e-07 58.5 53 47.2
Psat4g071720 Pisum sativum HOM05D008102 ORTHO05D010266 2.8e-07 58.5 59 49.2
Peaxi162Scf00002g01718 Petunia axillaris HOM05D008102 ORTHO05D010266 3.6e-07 58.2 43 53.5
EL10Ac5g13056 Beta vulgaris HOM05D008102 ORTHO05D010266 4.7e-07 57.8 41 56.1
BcaC02g07675 Brassica carinata HOM05D008102 ORTHO05D010266 4.7e-07 57.8 43 48.8
C04p64690 Brassica napus HOM05D008102 ORTHO05D010266 4.7e-07 57.8 43 48.8
BolC4t27946H Brassica oleracea HOM05D008102 ORTHO05D010266 4.7e-07 57.8 43 48.8
Nitab4.5_0008481g0050 Nicotiana tabacum HOM05D008102 ORTHO05D010266 6.2e-07 57.4 43 53.5
Sopen08g027200 Solanum pennellii HOM05D008102 ORTHO05D010266 6.2e-07 57.4 72 37.5
Hund14530 Selenicereus undatus HOM05D008102 ORTHO05D010266 8.1e-07 57.0 43 51.2
Nn1g01035 Nelumbo nucifera HOM05D008102 ORTHO05D010266 1.1e-06 56.6 40 57.5
Carub.0004s1746 Capsella rubella HOM05D008102 ORTHO05D010266 1.4e-06 56.2 43 48.8
Thhalv10017440m.g Eutrema salsugineum HOM05D008102 ORTHO05D010266 1.4e-06 56.2 43 48.8
A04p27180 Brassica napus HOM05D008102 ORTHO05D010266 1.8e-06 55.8 70 37.1
BraA04t18216Z Brassica rapa HOM05D008102 ORTHO05D010266 1.8e-06 55.8 70 37.1
HanXRQChr03g0088621 Helianthus annuus HOM05D008102 ORTHO05D010266 1.8e-06 55.8 43 51.2
Solyc08g078730.3 Solanum lycopersicum HOM05D008102 ORTHO05D010266 1.8e-06 55.8 72 37.5
PGSC0003DMG400004757 Solanum tuberosum HOM05D008102 ORTHO05D010266 1.8e-06 55.8 72 36.1
Glyma.17G141000 Glycine max HOM05D008102 ORTHO05D010266 3.1e-06 55.1 42 54.8
Rhsim07G0108100 Rhododendron simsii HOM05D008102 ORTHO05D010266 3.1e-06 55.1 41 53.7
Sp4g18000 Schrenkiella parvula HOM05D008102 ORTHO05D010266 3.1e-06 55.1 43 48.8
Lj4g0008790 Lotus japonicus HOM05D008102 ORTHO05D010266 4.0e-06 54.7 80 37.5
Lalb_Chr05g0225771 Lupinus albus HOM05D002420 ORTHO05D002422 5.2e-06 54.3 48 50.0
CARHR129970 Cardamine hirsuta HOM05D008102 ORTHO05D010266 9.0e-06 53.5 85 34.1
Lsat_1_v5_gn_6_91441 Lactuca sativa HOM05D008102 ORTHO05D010266 9.0e-06 53.5 66 39.4
VMungo0251G3084 Vigna mungo HOM05D008102 ORTHO05D010266 9.0e-06 53.5 52 48.1


User provided reference genes

Program Settings