Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.D02032 Eucalyptus grandis HOM05D006860 ORTHO05D009547 2.1e-166 589.0 302 100.0
QL12p013422 Quercus lobata HOM05D006860 ORTHO05D009547 3.6e-65 252.7 272 51.1
Prupe.5G075300 Prunus persica HOM05D006860 ORTHO05D009547 5.2e-64 248.8 268 51.9
Haze_07857 Corylus avellana HOM05D006860 ORTHO05D009547 6.8e-64 248.4 268 53.0
Dinv39106 Davidia involucrata HOM05D006860 ORTHO05D009547 1.7e-62 243.8 266 50.8
Rhsim07G0104800 Rhododendron simsii HOM05D006860 ORTHO05D009547 7.1e-61 238.4 300 49.3
FAN04G1232 Fragaria x ananassa HOM05D006860 ORTHO05D009547 3.5e-60 236.1 259 50.6
Potri.001G120700 Populus trichocarpa HOM05D006860 ORTHO05D009547 7.8e-60 235.0 260 50.8
FvH4_5g00261 Fragaria vesca HOM05D006860 ORTHO05D009547 1.0e-59 234.6 259 50.6
FAN08G1076 Fragaria x ananassa HOM05D006860 ORTHO05D009547 6.6e-59 231.9 260 50.4
Sabra01G0093000 Salix brachista HOM05D006860 ORTHO05D009547 8.6e-59 231.5 259 50.6
RcHm_v2.0_Chr7g0202371 Rosa chinensis HOM05D006860 ORTHO05D009547 1.1e-58 231.1 269 48.7
TWI15G0511 Tripterygium wilfordii HOM05D006860 ORTHO05D009547 1.5e-58 230.7 269 48.3
FAN13G2943 Fragaria x ananassa HOM05D006860 ORTHO05D009547 4.3e-58 229.2 259 49.4
Thhalv10026873m.g Eutrema salsugineum HOM05D006860 ORTHO05D009547 2.8e-57 226.5 282 46.5
Manes.01G076800 Manihot esculenta HOM05D006860 ORTHO05D009547 6.2e-57 225.3 293 44.7
Cc08_g12900 Coffea canephora HOM05D006860 ORTHO05D009547 8.1e-57 224.9 268 48.9
PGSC0003DMG400004793 Solanum tuberosum HOM05D006860 ORTHO05D009547 1.1e-56 224.6 268 45.9
Nn6g34033 Nelumbo nucifera HOM05D006860 ORTHO05D009547 1.8e-56 223.8 266 49.6
Duzib084G1019 Durio zibethinus HOM05D006860 ORTHO05D009547 5.2e-56 222.2 263 49.4
CANSAT21G2349 Cannabis sativa HOM05D006860 ORTHO05D009547 6.8e-56 221.9 285 47.7
CAN.G1217.16 Capsicum annuum HOM05D006860 ORTHO05D009547 1.5e-55 220.7 294 43.9
Solyc08g079050.2 Solanum lycopersicum HOM05D006860 ORTHO05D009547 2.0e-55 220.3 268 45.5
Sopen08g027510 Solanum pennellii HOM05D006860 ORTHO05D009547 4.4e-55 219.2 268 45.5
Sp7g20650 Schrenkiella parvula HOM05D006860 ORTHO05D009547 9.9e-55 218.0 268 48.9
MD06G1063700 Malus domestica HOM05D006860 ORTHO05D009547 1.3e-54 217.6 272 47.1
Migut.A00808 Erythranthe guttata HOM05D006860 ORTHO05D009547 2.2e-54 216.9 263 47.9
SGA_v2.0_scaffold120G32852 Striga asiatica HOM05D006860 ORTHO05D009547 2.2e-54 216.9 279 48.0
Aa31LG6G4580 Aethionema arabicum HOM05D006860 ORTHO05D009547 2.9e-54 216.5 278 46.4
C01p16890 Brassica napus HOM05D006860 ORTHO05D009547 3.7e-54 216.1 270 47.8
BraA01t01334Z Brassica rapa HOM05D006860 ORTHO05D009547 3.7e-54 216.1 270 47.8
CARHR229490 Cardamine hirsuta HOM05D006860 ORTHO05D009547 3.7e-54 216.1 269 48.7
THA.LOC104813362 Tarenaya hassleriana HOM05D006860 ORTHO05D009547 4.9e-54 215.7 279 44.4
AT4G22600 Arabidopsis thaliana HOM05D006860 ORTHO05D009547 1.1e-53 214.5 270 46.7
BolC1t01631H Brassica oleracea HOM05D006860 ORTHO05D009547 1.9e-53 213.8 270 47.4
Glyma.15G182700 Glycine max HOM05D006860 ORTHO05D009547 1.9e-53 213.8 274 47.1
Nitab4.5_0012289g0010 Nicotiana tabacum HOM05D006860 ORTHO05D009547 1.9e-53 213.8 238 50.0
Oeu026500.1 Olea europaea HOM05D006860 ORTHO05D009547 2.4e-53 213.4 270 47.0
Thecc.03G256700 Theobroma cacao HOM05D006860 ORTHO05D009547 3.2e-53 213.0 267 47.2
A01p13880 Brassica napus HOM05D006860 ORTHO05D009547 4.1e-53 212.6 270 46.7
BcaC09g51131 Brassica carinata HOM05D006860 ORTHO05D009547 1.2e-52 211.1 270 46.7
Atru.chr9.1377 Acer truncatum HOM05D006860 ORTHO05D009547 1.6e-52 210.7 258 47.3
AL7G30980 Arabidopsis lyrata HOM05D006860 ORTHO05D009547 1.6e-52 210.7 270 45.6
Carub.0007s1871 Capsella rubella HOM05D006860 ORTHO05D009547 1.6e-52 210.7 270 46.3
Lalb_Chr23g0276231 Lupinus albus HOM05D006860 ORTHO05D009547 2.1e-52 210.3 306 43.1
Peaxi162Scf00002g00093 Petunia axillaris HOM05D006860 ORTHO05D009547 1.7e-51 207.2 238 47.5
PGR031G3062 Punica granatum HOM05D006860 ORTHO05D009547 5.1e-51 205.7 261 47.9
Aqoxy7G00725 Aquilegia oxysepala HOM05D006860 ORTHO05D009547 6.6e-51 205.3 265 46.0
Nitab4.5_0000993g0040 Nicotiana tabacum HOM05D006860 ORTHO05D009547 8.6e-51 204.9 220 51.4
CiPaw.11G150700 Carya illinoinensis HOM05D006860 ORTHO05D009547 1.9e-50 203.8 217 48.8
Psat1g138880 Pisum sativum HOM05D006860 ORTHO05D009547 2.5e-50 203.4 261 43.3
FAN18G3824 Fragaria x ananassa HOM05D006860 ORTHO05D009547 4.3e-50 202.6 260 46.5
vmacro14104 Vaccinium macrocarpon HOM05D006860 ORTHO05D009547 2.8e-49 199.9 231 49.4
TAR375G0404 Trochodendron aralioides HOM05D006860 ORTHO05D009547 3.6e-49 199.5 235 49.8
DCAR_004924 Daucus carota HOM05D006860 ORTHO05D009547 6.2e-49 198.7 269 44.2
Ca_02280_v3 Cicer arietinum L. HOM05D006860 ORTHO05D009547 1.4e-48 197.6 262 42.7
Gorai.003G169400 Gossypium raimondii HOM05D006860 ORTHO05D009547 2.4e-48 196.8 274 43.8
Gohir.A03G009800 Gossypium hirsutum HOM05D006860 ORTHO05D009547 3.1e-48 196.4 274 43.4
Gohir.D03G160900 Gossypium hirsutum HOM05D006860 ORTHO05D009547 1.2e-47 194.5 274 43.1
Nn4g23121 Nelumbo nucifera HOM05D006860 ORTHO05D009547 5.8e-47 192.2 218 50.5
arahy.Tifrunner.gnm1.ann1.26U38F Arachis hypogaea HOM05D006860 ORTHO05D009547 1.7e-46 190.7 270 44.4
arahy.Tifrunner.gnm1.ann1.NHN2FI Arachis hypogaea HOM05D006860 ORTHO05D009547 1.7e-46 190.7 270 44.4
PSO017G2204 Papaver somniferum HOM05D006860 ORTHO05D009547 4.9e-46 189.1 268 39.9
EL10Ac5g13012 Beta vulgaris HOM05D006860 ORTHO05D009547 6.4e-46 188.7 272 43.0
Lj6g0006421 Lotus japonicus HOM05D006860 ORTHO05D009547 8.4e-46 188.3 284 41.2
Medtr2g044090 Medicago truncatula HOM05D006860 ORTHO05D009547 1.4e-45 187.6 262 39.7
Phvul.009G223700 Phaseolus vulgaris HOM05D006860 ORTHO05D009547 7.1e-45 185.3 265 43.0
PSO170G3955 Papaver somniferum HOM05D006860 ORTHO05D009547 1.2e-44 184.5 268 39.6
VMungo1309G2714 Vigna mungo HOM05D006860 ORTHO05D009547 4.6e-44 182.6 268 41.8
Cpa.g.sc29.129 Carica papaya HOM05D006860 ORTHO05D009547 3.0e-43 179.9 256 44.5
Ciclev10024312m.g Citrus clementina HOM05D006860 ORTHO05D009547 1.6e-41 174.1 257 42.0
ECA233G1099 Erigeron canadensis HOM05D006860 ORTHO05D009547 1.1e-40 171.4 285 39.6
HanXRQChr13g0394991 Helianthus annuus HOM05D006860 ORTHO05D009547 4.4e-39 166.0 280 41.1
TPR.G24674 Trifolium pratense HOM05D006860 ORTHO05D009547 5.8e-39 165.6 249 39.4
Ah.12g056480 Amaranthus hybridus HOM05D006860 ORTHO05D009547 3.8e-38 162.9 251 41.4
Actinidia27452 Actinidia chinensis HOM05D006860 ORTHO05D009547 1.4e-37 161.0 207 45.4
HPP92_025603 Vanilla planifolia HOM05D006860 ORTHO05D009547 2.7e-36 156.8 282 37.2
unitig_27.g24920 Utricularia gibba HOM05D006860 ORTHO05D009547 3.5e-36 156.4 252 40.9
Sc07g0009390 Simmondsia chinensis HOM05D000685 ORTHO05D000511 5.8e-31 139.0 234 42.3
Zm00001eb249700 Zea mays HOM05D006860 ORTHO05D009547 2.7e-28 130.2 266 33.5
HPP92_025643 Vanilla planifolia HOM05D006860 ORTHO05D009547 1.8e-27 127.5 270 35.2
COL.COLO4_37211 Corchorus olitorius HOM05D006860 ORTHO05D009547 1.4e-24 117.9 115 53.9
Ciclev10023898m.g Citrus clementina HOM05D006860 ORTHO05D009547 1.7e-22 110.9 132 46.2
Os02g0661300 Oryza sativa ssp. japonica HOM05D006860 ORTHO05D009547 3.2e-21 106.7 263 30.8
Sp7g20630 Schrenkiella parvula HOM05D006860 ORTHO05D015488 9.3e-21 105.1 254 33.5
Carub.0008s2329 Capsella rubella HOM05D006860 ORTHO05D009547 5.1e-19 99.4 258 29.5
BcaB03g15470 Brassica carinata HOM05D006860 ORTHO05D009547 7.4e-18 95.5 258 29.5
BcaB03g15468 Brassica carinata HOM05D000561 ORTHO05D009547 4.8e-17 92.8 256 30.5
BcaNung01686 Brassica carinata HOM05D006860 ORTHO05D009547 5.3e-16 89.4 267 30.7
C07p51910 Brassica napus HOM05D006860 ORTHO05D028065 5.3e-16 89.4 271 30.3
BcaNung02490 Brassica carinata HOM05D006860 ORTHO05D015488 6.9e-16 89.0 269 30.1
EL10Ac9g21191 Beta vulgaris HOM05D006860 ORTHO05D009547 2.6e-15 87.0 145 36.6
BcaNung02492 Brassica carinata HOM05D006860 ORTHO05D015488 5.9e-15 85.9 264 28.4
A03p53560 Brassica napus HOM05D006860 ORTHO05D015488 7.6e-15 85.5 266 28.9
C07p51900 Brassica napus HOM05D006860 ORTHO05D015488 7.6e-15 85.5 264 28.4
BolC7t45689H Brassica oleracea HOM05D006860 ORTHO05D015488 7.6e-15 85.5 264 28.4
BraA03t14423Z Brassica rapa HOM05D006860 ORTHO05D028065 1.0e-14 85.1 267 30.0
A03p53570 Brassica napus HOM05D006860 ORTHO05D028065 1.3e-14 84.7 267 30.0
BcaNung01688 Brassica carinata HOM05D006860 ORTHO05D015488 2.2e-14 84.0 265 27.2
BraA03t14422Z Brassica rapa HOM05D006860 ORTHO05D015488 2.9e-14 83.6 266 28.6
BolC7t45690H Brassica oleracea HOM05D006860 ORTHO05D028065 1.1e-13 81.6 271 28.8
AUR62007478 Chenopodium quinoa HOM05D006860 ORTHO05D009547 1.4e-13 81.3 109 42.2
BraA03t14425Z Brassica rapa HOM05D006860 ORTHO05D015488 2.3e-11 73.9 272 28.7
A03p53590 Brassica napus HOM05D006860 ORTHO05D015488 5.1e-11 72.8 273 28.9
C07p51920 Brassica napus HOM05D006860 ORTHO05D015488 8.7e-11 72.0 254 30.3
BolC7t45692H Brassica oleracea HOM05D006860 ORTHO05D015488 8.7e-11 72.0 254 30.3
SGA_v2.0_scaffold16G07543 Striga asiatica HOM05D006860 ORTHO05D009547 8.7e-11 72.0 54 63.0
BcaNung01685 Brassica carinata HOM05D006860 ORTHO05D009547 1.9e-10 70.9 268 28.4
Ciclev10010734m.g Citrus clementina HOM05D006860 ORTHO05D009547 1.9e-10 70.9 111 41.4
Ciclev10018172m.g Citrus clementina HOM05D006860 ORTHO05D009547 1.9e-10 70.9 73 47.9
SGA_v2.0_scaffold15G07181 Striga asiatica HOM05D011902 ORTHO05D009547 2.2e-09 67.4 54 57.4
Ca_27374_v3 Cicer arietinum L. HOM05D006860 ORTHO05D009547 4.1e-08 63.2 59 52.5
Ca_19832_v3 Cicer arietinum L. HOM05D000030 ORTHO05D000009 9.0e-08 62.0 75 46.7
EL10Ac8g19726 Beta vulgaris HOM05D006860 ORTHO05D009547 2.0e-07 60.8 56 50.0
SGA_v2.0_scaffold191G40457 Striga asiatica HOM05D000592 ORTHO05D001485 1.0e-06 58.5 63 50.8


User provided reference genes

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