Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.D01921 Eucalyptus grandis HOM05D000734 ORTHO05D192796 2.3e-48 195.3 100 100.0
Eucgr.L01966 Eucalyptus grandis HOM05D000734 ORTHO05D002090 4.9e-27 124.4 69 95.7
Haze_08947 Corylus avellana HOM05D000734 ORTHO05D002090 1.2e-12 76.6 117 40.2
Cfa012104 Carpinus fangiana HOM05D000734 ORTHO05D002090 4.5e-12 74.7 117 39.3
Duzib235G0267 Durio zibethinus HOM05D000734 ORTHO05D002090 3.8e-11 71.6 117 37.6
Prupe.5G091300 Prunus persica HOM05D000734 ORTHO05D002090 1.9e-10 69.3 119 36.1
COL.COLO4_31135 Corchorus olitorius HOM05D003547 ORTHO05D004236 2.5e-10 68.9 114 37.7
Glyma.05G049600 Glycine max HOM05D000734 ORTHO05D002090 2.5e-10 68.9 106 36.8
CsaV3_5G015450 Cucumis sativus L. HOM05D000734 ORTHO05D002090 1.6e-09 66.2 112 39.3
Glyma.17G131600 Glycine max HOM05D000734 ORTHO05D002090 3.5e-09 65.1 106 36.8
Medtr4g102740 Medicago truncatula HOM05D000734 ORTHO05D002090 3.5e-09 65.1 108 38.9
RcHm_v2.0_Chr7g0199191 Rosa chinensis HOM05D000734 ORTHO05D002090 4.6e-09 64.7 120 35.8
CSS0044000 Camellia sinensis var. sinensis HOM05D000734 ORTHO05D002090 7.9e-09 63.9 126 32.5
Phvul.003G212500 Phaseolus vulgaris HOM05D000734 ORTHO05D002090 7.9e-09 63.9 105 41.0
Thecc.06G017400 Theobroma cacao HOM05D000734 ORTHO05D002090 7.9e-09 63.9 118 36.4
HPP92_007376 Vanilla planifolia HOM05D000734 ORTHO05D002090 7.9e-09 63.9 99 37.4
MELO3C018303.2 Cucumis melo HOM05D000734 ORTHO05D002090 1.0e-08 63.5 109 37.6
CSS0010683 Camellia sinensis var. sinensis HOM05D000734 ORTHO05D002090 1.3e-08 63.2 126 31.7
Psat4g067200 Pisum sativum HOM05D000734 ORTHO05D002090 1.3e-08 63.2 100 40.0
HPP92_022368 Vanilla planifolia HOM05D000734 ORTHO05D002090 1.3e-08 63.2 105 38.1
VMungo1215G3069 Vigna mungo HOM05D000734 ORTHO05D002090 1.3e-08 63.2 102 38.2
ClCG07G006720 Citrullus lanatus HOM05D000734 ORTHO05D002090 1.8e-08 62.8 114 39.5
FvH4_5g01500 Fragaria vesca HOM05D000734 ORTHO05D002090 3.9e-08 61.6 120 36.7
FAN08G0461 Fragaria x ananassa HOM05D003547 ORTHO05D004236 3.9e-08 61.6 120 36.7
FAN13G0583 Fragaria x ananassa HOM05D003547 ORTHO05D004236 3.9e-08 61.6 120 36.7
FAN18G3487 Fragaria x ananassa HOM05D003547 ORTHO05D004236 3.9e-08 61.6 120 36.7
Manes.01G066900 Manihot esculenta HOM05D000734 ORTHO05D002090 3.9e-08 61.6 107 34.6
GSVIVG01010619001 Vitis vinifera HOM05D000734 ORTHO05D002090 5.1e-08 61.2 98 36.7
Cpa.g.sc74.88 Carica papaya HOM05D000734 ORTHO05D002090 6.7e-08 60.8 108 36.1
QL12p017239 Quercus lobata HOM05D000734 ORTHO05D002090 6.7e-08 60.8 120 34.2
Dinv39009 Davidia involucrata HOM05D000734 ORTHO05D002090 1.5e-07 59.7 110 37.3
Lj4g0010508 Lotus japonicus HOM05D000734 ORTHO05D002090 1.5e-07 59.7 116 39.7
Atru.chr9.1543 Acer truncatum HOM05D000734 ORTHO05D002090 1.9e-07 59.3 112 35.7
BcaB07g29801 Brassica carinata HOM05D000734 ORTHO05D002090 1.9e-07 59.3 101 34.7
arahy.Tifrunner.gnm1.ann1.ED3VG4 Arachis hypogaea HOM05D000734 ORTHO05D002090 2.5e-07 58.9 100 35.0
Migut.F00376 Erythranthe guttata HOM05D000734 ORTHO05D002090 3.3e-07 58.5 101 33.7
PGR142G1281 Punica granatum HOM05D000734 ORTHO05D002090 3.3e-07 58.5 117 31.6
DCAR_006760 Daucus carota HOM05D000734 ORTHO05D002090 7.4e-07 57.4 104 34.6
PGR031G2289 Punica granatum HOM05D000734 ORTHO05D002090 7.4e-07 57.4 122 32.0
CANSAT21G0477 Cannabis sativa HOM05D000734 ORTHO05D002090 9.6e-07 57.0 106 33.0
SGA_v2.0_scaffold221G42726 Striga asiatica HOM05D000734 ORTHO05D002090 9.6e-07 57.0 99 31.3
AL6G17440 Arabidopsis lyrata HOM05D000734 ORTHO05D002090 1.3e-06 56.6 99 31.3
CANSAT21G1993 Cannabis sativa HOM05D000734 ORTHO05D002090 1.3e-06 56.6 134 30.6
Solyc08g080320.3 Solanum lycopersicum HOM05D000734 ORTHO05D002090 1.3e-06 56.6 99 37.4
PGSC0003DMG400022760 Solanum tuberosum HOM05D000734 ORTHO05D002090 1.3e-06 56.6 102 38.2
THA.LOC104801905 Tarenaya hassleriana HOM05D000734 ORTHO05D002090 1.3e-06 56.6 103 35.9
TWI15G1022 Tripterygium wilfordii HOM05D000734 ORTHO05D002090 1.3e-06 56.6 116 36.2
Ciclev10021471m.g Citrus clementina HOM05D000734 ORTHO05D002090 1.6e-06 56.2 108 41.7
Potri.003G121500 Populus trichocarpa HOM05D000734 ORTHO05D002090 1.6e-06 56.2 119 34.5
HanXRQChr13g0405641 Helianthus annuus HOM05D000734 ORTHO05D002090 2.1e-06 55.8 131 30.5
Medtr1g101440 Medicago truncatula HOM05D000734 ORTHO05D002090 2.1e-06 55.8 128 30.5
TAR374G1679 Trochodendron aralioides HOM05D000734 ORTHO05D002090 2.1e-06 55.8 112 33.0
LjContig00238g0000303 Lotus japonicus HOM05D000734 ORTHO05D002090 2.8e-06 55.5 120 29.2
TPR.G19212 Trifolium pratense HOM05D000734 ORTHO05D002090 2.8e-06 55.5 102 37.3
TWI81G0297 Tripterygium wilfordii HOM05D000734 ORTHO05D002090 2.8e-06 55.5 101 35.6
Carub.0008s1216 Capsella rubella HOM05D000734 ORTHO05D002090 3.7e-06 55.1 117 29.1
CAN.G981.34 Capsicum annuum HOM05D000734 ORTHO05D002090 3.7e-06 55.1 102 38.2
CiPaw.12G098100 Carya illinoinensis HOM05D000734 ORTHO05D002090 3.7e-06 55.1 61 47.5
Dinv28480 Davidia involucrata HOM05D000734 ORTHO05D002090 3.7e-06 55.1 122 31.1
Sed0023577 Sechium edule HOM05D000734 ORTHO05D002090 3.7e-06 55.1 108 36.1
ATR0757G013 Amborella trichopoda HOM05D000734 ORTHO05D002090 4.8e-06 54.7 90 33.3
Thhalv10004705m.g Eutrema salsugineum HOM05D000734 ORTHO05D002090 4.8e-06 54.7 101 29.7
Psat1g102960 Pisum sativum HOM05D000734 ORTHO05D002090 4.8e-06 54.7 115 30.4
CSS0009844 Camellia sinensis var. sinensis HOM05D000734 ORTHO05D002090 6.2e-06 54.3 118 29.7
CSS0017382 Camellia sinensis var. sinensis HOM05D000734 ORTHO05D002090 6.2e-06 54.3 118 29.7
RcHm_v2.0_Chr1g0376721 Rosa chinensis HOM05D000734 ORTHO05D002090 6.2e-06 54.3 128 29.7
Lalb_Chr01g0009121 Lupinus albus HOM05D000734 ORTHO05D002090 8.2e-06 53.9 119 28.6
SalBow2G0202 Salvia bowleyana HOM05D000734 ORTHO05D002090 8.2e-06 53.9 124 29.0
unitig_61.g26294 Utricularia gibba HOM05D000734 ORTHO05D002090 8.2e-06 53.9 98 31.6
HPP92_015044 Vanilla planifolia HOM05D000734 ORTHO05D002090 8.2e-06 53.9 97 35.1


User provided reference genes

Program Settings