Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.D01907 Eucalyptus grandis HOM05D008361 ORTHO05D010527 6.1e-80 300.8 159 100.0
PGR031G0074 Punica granatum HOM05D008361 ORTHO05D010527 8.6e-58 227.3 153 74.5
TWI81G0130 Tripterygium wilfordii HOM05D008361 ORTHO05D010527 4.9e-45 184.9 165 58.8
Ciclev10024020m.g Citrus clementina HOM05D008361 ORTHO05D010527 1.3e-42 176.8 175 55.4
QL12p017696 Quercus lobata HOM05D008361 ORTHO05D010527 4.3e-41 171.8 164 57.9
Rhsim07G0093200 Rhododendron simsii HOM05D008361 ORTHO05D010527 4.3e-41 171.8 166 60.2
Dinv38990 Davidia involucrata HOM05D008361 ORTHO05D010527 5.6e-41 171.4 165 59.4
Hma1.2p1_0514F.1_g169930 Hydrangea macrophylla HOM05D008361 ORTHO05D010527 3.6e-40 168.7 141 61.7
Thecc.03G273500 Theobroma cacao HOM05D008361 ORTHO05D010527 8.1e-40 167.5 161 55.9
TAR629G3045 Trochodendron aralioides HOM05D008361 ORTHO05D010527 1.1e-39 167.2 160 60.0
Manes.02G025400 Manihot esculenta HOM05D008361 ORTHO05D010527 1.8e-39 166.4 162 56.8
Duzib084G0204 Durio zibethinus HOM05D008361 ORTHO05D010527 9.8e-38 160.6 165 53.3
vmacro13932 Vaccinium macrocarpon HOM05D008361 ORTHO05D010527 1.7e-37 159.8 165 57.0
Atru.chr9.1564 Acer truncatum HOM05D008361 ORTHO05D010527 6.0e-35 151.4 155 54.8
Gorai.004G209100 Gossypium raimondii HOM05D008361 ORTHO05D010527 7.8e-35 151.0 167 51.5
CANSAT21G0386 Cannabis sativa HOM05D008361 ORTHO05D010527 2.3e-34 149.4 158 55.7
Oeu029779.2 Olea europaea HOM05D008361 ORTHO05D010527 9.5e-33 144.1 161 49.7
Peaxi162Scf00714g00330 Petunia axillaris HOM05D008361 ORTHO05D010527 1.2e-32 143.7 181 50.3
Nn1g01412 Nelumbo nucifera HOM05D008361 ORTHO05D010527 1.6e-32 143.3 162 52.5
Gohir.A08G179550 Gossypium hirsutum HOM05D008361 ORTHO05D010527 2.8e-32 142.5 169 49.1
PSO478G1996 Papaver somniferum HOM05D008361 ORTHO05D010527 1.1e-31 140.6 146 53.4
Potri.001G102600 Populus trichocarpa HOM05D008361 ORTHO05D010527 1.8e-31 139.8 162 52.5
Gohir.A12G225900 Gossypium hirsutum HOM05D008361 ORTHO05D010527 4.0e-31 138.7 155 53.5
Sopen08g028880 Solanum pennellii HOM05D008361 ORTHO05D010527 4.0e-31 138.7 158 53.2
PSO782G5127 Papaver somniferum HOM05D008361 ORTHO05D010527 5.2e-31 138.3 146 52.7
GSVIVG01019832001 Vitis vinifera HOM05D008361 ORTHO05D010527 6.8e-31 137.9 133 57.1
Gohir.D12G228400 Gossypium hirsutum HOM05D008361 ORTHO05D010527 4.4e-30 135.2 155 52.9
Sabra01G0077700 Salix brachista HOM05D008361 ORTHO05D010527 9.9e-30 134.0 163 50.3
THA.LOC104806378 Tarenaya hassleriana HOM05D008361 ORTHO05D010527 2.9e-29 132.5 162 52.5
Actinidia27400 Actinidia chinensis HOM05D008361 ORTHO05D010527 1.4e-28 130.2 127 56.7
Cpa.g.sc74.67 Carica papaya HOM05D008361 ORTHO05D010527 1.4e-28 130.2 145 51.7
Nitab4.5_0010472g0040 Nicotiana tabacum HOM05D008361 ORTHO05D010527 9.2e-28 127.5 126 57.1
Lsat_1_v5_gn_3_8380 Lactuca sativa HOM05D008361 ORTHO05D010527 3.5e-27 125.6 146 52.1
CARHR254730 Cardamine hirsuta HOM05D008361 ORTHO05D010527 3.0e-26 122.5 155 47.1
A09p27520 Brassica napus HOM05D008361 ORTHO05D010527 1.9e-25 119.8 139 51.1
C09p34810 Brassica napus HOM05D008361 ORTHO05D010527 1.9e-25 119.8 139 51.1
BolC9t56327H Brassica oleracea HOM05D008361 ORTHO05D010527 1.9e-25 119.8 139 51.1
BraA09t38320Z Brassica rapa HOM05D008361 ORTHO05D010527 1.9e-25 119.8 139 51.1
ECA236G4060 Erigeron canadensis HOM05D008361 ORTHO05D010527 1.9e-25 119.8 133 54.9
Migut.A00801 Erythranthe guttata HOM05D008361 ORTHO05D010527 4.3e-25 118.6 157 47.8
Thhalv10028959m.g Eutrema salsugineum HOM05D008361 ORTHO05D010527 7.3e-25 117.9 153 47.7
AL6G46250 Arabidopsis lyrata HOM05D008361 ORTHO05D010527 2.1e-24 116.3 150 48.0
AT4G11655 Arabidopsis thaliana HOM05D008361 ORTHO05D010527 4.7e-24 115.2 149 48.3
HanXRQChr05g0132741 Helianthus annuus HOM05D008361 ORTHO05D010527 6.2e-24 114.8 152 45.4
BcaB01g01669 Brassica carinata HOM05D008361 ORTHO05D010527 1.8e-23 113.2 160 45.0
Carub.0006s3074 Capsella rubella HOM05D008361 ORTHO05D010527 4.0e-23 112.1 159 44.7
Gorai.008G244500 Gossypium raimondii HOM05D008361 ORTHO05D010527 6.8e-23 111.3 129 52.7
Sp6g05820 Schrenkiella parvula HOM05D008361 ORTHO05D010527 2.6e-22 109.4 151 46.4
SalBow1G8630 Salvia bowleyana HOM05D008361 ORTHO05D010527 3.4e-22 109.0 129 46.5
Gohir.D08G198300 Gossypium hirsutum HOM05D008361 ORTHO05D010527 6.4e-21 104.8 167 42.5
CDE11G0059 Ceratophyllum demersum HOM05D008361 ORTHO05D010527 4.8e-16 88.6 139 41.0
ATR0317G124 Amborella trichopoda HOM05D008361 ORTHO05D010527 5.4e-12 75.1 156 39.1
CDE04G2251 Ceratophyllum demersum HOM05D008361 ORTHO05D010527 7.1e-12 74.7 98 41.8
MBI16_g06253_MAGBIO Magnolia biondii HOM05D008361 ORTHO05D010527 1.9e-09 66.6 64 50.0
ATR0730G035 Amborella trichopoda HOM05D001228 ORTHO05D002377 1.3e-08 63.9 93 40.9
AT5G62820 Arabidopsis thaliana HOM05D001228 ORTHO05D002377 3.6e-08 62.4 100 36.0
Sp4g18580 Schrenkiella parvula HOM05D001228 ORTHO05D002377 3.6e-08 62.4 112 35.7
BcaC01g02524 Brassica carinata HOM05D001228 ORTHO05D002377 6.2e-08 61.6 100 34.0
BolC3t18646H Brassica oleracea HOM05D001228 ORTHO05D002377 6.2e-08 61.6 100 34.0
Sp2g25970 Schrenkiella parvula HOM05D001228 ORTHO05D002377 6.2e-08 61.6 100 37.0
Aa31LG11G870 Aethionema arabicum HOM05D001228 ORTHO05D002377 8.1e-08 61.2 100 37.0
C03p63920 Brassica napus HOM05D001228 ORTHO05D002377 8.1e-08 61.2 100 34.0
BcaB02g09360 Brassica carinata HOM05D001228 ORTHO05D002377 1.1e-07 60.8 110 36.4
A06p29580 Brassica napus HOM05D001228 ORTHO05D002377 1.1e-07 60.8 100 34.0
CARHR130620 Cardamine hirsuta HOM05D001228 ORTHO05D002377 1.1e-07 60.8 110 36.4
ClCG06G016960 Citrullus lanatus HOM05D001228 ORTHO05D002377 1.4e-07 60.5 117 34.2
Prupe.5G174700 Prunus persica HOM05D001228 ORTHO05D002377 1.4e-07 60.5 111 34.2
Aa31LG5G21500 Aethionema arabicum HOM05D001228 ORTHO05D002377 1.8e-07 60.1 110 35.5
MELO3C017095.2 Cucumis melo HOM05D001228 ORTHO05D002377 1.8e-07 60.1 117 34.2
CsaV3_1G001550 Cucumis sativus L. HOM05D001228 ORTHO05D002377 1.8e-07 60.1 97 37.1
Carub.0008s2354 Capsella rubella HOM05D001228 ORTHO05D002377 2.4e-07 59.7 100 32.0
BcaC02g11749 Brassica carinata HOM05D001228 ORTHO05D002377 3.1e-07 59.3 110 35.5
BraA06t25904Z Brassica rapa HOM05D001228 ORTHO05D002377 3.1e-07 59.3 100 33.0
Carub.0004s1811 Capsella rubella HOM05D001228 ORTHO05D002377 3.1e-07 59.3 110 34.5
AL8G39780 Arabidopsis lyrata HOM05D001228 ORTHO05D002377 4.0e-07 58.9 100 33.0
CARHR276600 Cardamine hirsuta HOM05D001228 ORTHO05D002377 4.0e-07 58.9 98 35.7
SEGI_30233 Sequoiadendron giganteum HOM05D001228 ORTHO05D003869 4.0e-07 58.9 112 36.6
GSVIVG01007763001 Vitis vinifera HOM05D001228 ORTHO05D002377 4.0e-07 58.9 77 42.9
Glyma.06G183000 Glycine max HOM05D001228 ORTHO05D002377 9.0e-07 57.8 113 30.1
Thecc.03G010800 Theobroma cacao HOM05D001228 ORTHO05D002377 9.0e-07 57.8 104 37.5
BcaB07g29852 Brassica carinata HOM05D001228 ORTHO05D002377 1.5e-06 57.0 100 32.0
HPP92_021834 Vanilla planifolia HOM05D001228 ORTHO05D002377 1.5e-06 57.0 107 34.6
BcaC03g18172 Brassica carinata HOM05D001228 ORTHO05D002377 2.0e-06 56.6 100 33.0
C02p62420 Brassica napus HOM05D001228 ORTHO05D002377 2.0e-06 56.6 100 33.0
BolC2t12296H Brassica oleracea HOM05D001228 ORTHO05D002377 2.0e-06 56.6 100 33.0
SEGI_01953 Sequoiadendron giganteum HOM05D001228 ORTHO05D003869 2.0e-06 56.6 106 34.9
CANSAT64G1579 Cannabis sativa HOM05D001228 ORTHO05D002377 2.6e-06 56.2 73 39.7
Glyma.17G090100 Glycine max HOM05D001228 ORTHO05D002377 2.6e-06 56.2 133 32.3
Thhalv10004696m.g Eutrema salsugineum HOM05D001228 ORTHO05D002377 3.4e-06 55.8 142 30.3
A02p42490 Brassica napus HOM05D001228 ORTHO05D002377 4.5e-06 55.5 114 30.7
BraA02t09177Z Brassica rapa HOM05D001228 ORTHO05D002377 4.5e-06 55.5 114 30.7
CiPaw.11G027300 Carya illinoinensis HOM05D001228 ORTHO05D002377 4.5e-06 55.5 100 35.0
COL.COLO4_34416 Corchorus olitorius HOM05D008361 ORTHO05D010527 4.5e-06 55.5 90 46.7
Glyma.04G181900 Glycine max HOM05D001228 ORTHO05D002377 4.5e-06 55.5 100 34.0
Phvul.003G199800 Phaseolus vulgaris HOM05D001228 ORTHO05D002377 4.5e-06 55.5 99 36.4
CsaV3_5G037240 Cucumis sativus L. HOM05D001228 ORTHO05D002377 5.8e-06 55.1 95 35.8
Migut.I00019 Erythranthe guttata HOM05D001228 ORTHO05D002377 5.8e-06 55.1 97 35.1
Dinv20662 Davidia involucrata HOM05D001228 ORTHO05D002377 7.6e-06 54.7 101 37.6
PGR083G2746 Punica granatum HOM05D001228 ORTHO05D002377 7.6e-06 54.7 99 36.4
VMungo1215G0222 Vigna mungo HOM05D001228 ORTHO05D002377 7.6e-06 54.7 151 35.1
VMungo1309G1620 Vigna mungo HOM05D001228 ORTHO05D002377 7.6e-06 54.7 109 30.3
Actinidia19096 Actinidia chinensis HOM05D001228 ORTHO05D002377 9.9e-06 54.3 99 36.4
AL4G32480 Arabidopsis lyrata HOM05D001228 ORTHO05D002377 9.9e-06 54.3 110 30.9
Oeu016371.1 Olea europaea HOM05D001228 ORTHO05D002377 9.9e-06 54.3 99 36.4
TAR623G1791 Trochodendron aralioides HOM05D001228 ORTHO05D003869 9.9e-06 54.3 133 33.1


User provided reference genes

Program Settings