Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.D01744 Eucalyptus grandis HOM05D007727 ORTHO05D009078 3.5e-77 291.6 149 100.0
Eucgr.D01747 Eucalyptus grandis HOM05D007727 ORTHO05D009078 3.5e-53 211.8 146 74.0
Eucgr.D01742 Eucalyptus grandis HOM05D007727 ORTHO05D009078 3.8e-23 112.1 66 86.4
Sabra01G0067800 Salix brachista HOM05D007727 ORTHO05D009078 6.9e-17 91.3 116 50.9
Sabra01G0067700 Salix brachista HOM05D007727 ORTHO05D009078 1.2e-16 90.5 116 51.7
Phvul.002G164400 Phaseolus vulgaris HOM05D007727 ORTHO05D009078 6.4e-15 84.7 117 47.0
Hma1.2p1_1746F.1_g300420 Hydrangea macrophylla HOM05D007727 ORTHO05D009078 1.9e-14 83.2 119 44.5
Potri.003G140200 Populus trichocarpa HOM05D007727 ORTHO05D009078 1.9e-14 83.2 124 44.4
Potri.003G140233 Populus trichocarpa HOM05D007727 ORTHO05D009078 1.9e-14 83.2 124 44.4
Potri.003G140266 Populus trichocarpa HOM05D007727 ORTHO05D009078 1.9e-14 83.2 124 44.4
Potri.001G091400 Populus trichocarpa HOM05D007727 ORTHO05D009078 2.4e-14 82.8 120 49.2
Potri.004G151000 Populus trichocarpa HOM05D007727 ORTHO05D009078 4.2e-14 82.0 126 46.0
COL.COLO4_10705 Corchorus olitorius HOM05D007727 ORTHO05D009078 7.1e-14 81.3 120 42.5
Duzib205G0888 Durio zibethinus HOM05D007727 ORTHO05D009078 1.6e-13 80.1 129 43.4
QL02p030408 Quercus lobata HOM05D007727 ORTHO05D009078 2.1e-13 79.7 83 53.0
Thecc.03G298300 Theobroma cacao HOM05D007727 ORTHO05D009078 2.1e-13 79.7 152 40.8
Hma1.2p1_1461F.1_g285070 Hydrangea macrophylla HOM05D007727 ORTHO05D009078 2.7e-13 79.3 148 42.6
Cfa012009 Carpinus fangiana HOM05D007727 ORTHO05D009078 3.5e-13 79.0 115 45.2
QL02p030393 Quercus lobata HOM05D007727 ORTHO05D009078 3.5e-13 79.0 107 43.9
Glyma.05G216900 Glycine max HOM05D007727 ORTHO05D009078 6.0e-13 78.2 101 47.5
Glyma.11G017500 Glycine max HOM05D007727 ORTHO05D009078 1.0e-12 77.4 64 65.6
QL02p030389 Quercus lobata HOM05D007727 ORTHO05D009078 1.0e-12 77.4 122 42.6
Rhsim02G0243800 Rhododendron simsii HOM05D007727 ORTHO05D009078 1.0e-12 77.4 64 64.1
Prupe.5G120300 Prunus persica HOM05D007727 ORTHO05D009078 1.3e-12 77.0 123 42.3
Manes.02G009800 Manihot esculenta HOM05D007727 ORTHO05D009078 1.8e-12 76.6 78 56.4
QL02p030384 Quercus lobata HOM05D007727 ORTHO05D009078 1.8e-12 76.6 122 43.4
Dinv38830 Davidia involucrata HOM05D007727 ORTHO05D009078 2.3e-12 76.3 64 65.6
Rhsim02G0243900 Rhododendron simsii HOM05D007727 ORTHO05D009078 2.3e-12 76.3 63 63.5
Rhsim02G0244000 Rhododendron simsii HOM05D007727 ORTHO05D009078 3.9e-12 75.5 72 56.9
VMungo1215G2373 Vigna mungo HOM05D007727 ORTHO05D009078 3.9e-12 75.5 109 44.0
FvH4_5g04620 Fragaria vesca HOM05D007727 ORTHO05D009078 5.1e-12 75.1 113 45.1
FAN18G4426 Fragaria x ananassa HOM05D007727 ORTHO05D009078 5.1e-12 75.1 113 45.1
Lj4g0015473 Lotus japonicus HOM05D007727 ORTHO05D009078 5.1e-12 75.1 110 46.4
Gohir.A08G103450 Gossypium hirsutum HOM05D007727 ORTHO05D009078 6.7e-12 74.7 135 40.0
Rhsim02G0243600 Rhododendron simsii HOM05D007727 ORTHO05D009078 6.7e-12 74.7 64 60.9
Rhsim02G0243700 Rhododendron simsii HOM05D007727 ORTHO05D009078 6.7e-12 74.7 64 60.9
FAN13G2104 Fragaria x ananassa HOM05D007727 ORTHO05D009078 8.7e-12 74.3 113 45.1
FAN13G3265 Fragaria x ananassa HOM05D007727 ORTHO05D009078 8.7e-12 74.3 113 45.1
Glyma.01G225500 Glycine max HOM05D007727 ORTHO05D009078 8.7e-12 74.3 62 67.7
Cfa012003 Carpinus fangiana HOM05D007727 ORTHO05D009078 1.1e-11 73.9 121 43.8
Cfa012008 Carpinus fangiana HOM05D007727 ORTHO05D009078 1.1e-11 73.9 121 43.8
Haze_09065 Corylus avellana HOM05D007727 ORTHO05D009078 1.1e-11 73.9 116 46.6
Haze_09064 Corylus avellana HOM05D007727 ORTHO05D009078 1.5e-11 73.6 114 42.1
FAN18G0179 Fragaria x ananassa HOM05D007727 ORTHO05D009078 1.5e-11 73.6 113 45.1
Gorai.004G133300 Gossypium raimondii HOM05D007727 ORTHO05D009078 2.5e-11 72.8 109 44.0
Gohir.D08G130400 Gossypium hirsutum HOM05D007727 ORTHO05D009078 3.3e-11 72.4 109 44.0
Hma1.2p1_1461F.1_g285060 Hydrangea macrophylla HOM05D007727 ORTHO05D009078 3.3e-11 72.4 69 56.5
Hma1.2p1_2808F.1_g328866 Hydrangea macrophylla HOM05D007727 ORTHO05D009078 3.3e-11 72.4 69 56.5
LjContig00312_ERROPOS870357g0016151 Lotus japonicus HOM05D007727 ORTHO05D009078 3.3e-11 72.4 92 44.6
CiPaw.11G121100 Carya illinoinensis HOM05D007727 ORTHO05D009078 4.3e-11 72.0 96 46.9
CiPaw.12G082800 Carya illinoinensis HOM05D007727 ORTHO05D009078 4.3e-11 72.0 74 56.8
FAN04G2059 Fragaria x ananassa HOM05D007727 ORTHO05D009078 4.3e-11 72.0 91 46.2
FAN08G2749 Fragaria x ananassa HOM05D007727 ORTHO05D009078 4.3e-11 72.0 113 44.2
Glyma.08G023200 Glycine max HOM05D007727 ORTHO05D009078 4.3e-11 72.0 103 44.7
MSTRG.25675 Avicennia marina HOM05D007727 ORTHO05D009078 9.6e-11 70.9 99 47.5
CSS0050195 Camellia sinensis var. sinensis HOM05D007727 ORTHO05D009078 1.3e-10 70.5 115 39.1
Gohir.D03G083800 Gossypium hirsutum HOM05D007727 ORTHO05D009078 1.6e-10 70.1 46 71.7
Gorai.003G078900 Gossypium raimondii HOM05D007727 ORTHO05D009078 1.6e-10 70.1 46 71.7
CANSAT21G1217 Cannabis sativa HOM05D007727 ORTHO05D009078 2.1e-10 69.7 75 52.0
CiPaw.12G082600 Carya illinoinensis HOM05D007727 ORTHO05D009078 3.7e-10 68.9 54 64.8
CSS0019090 Camellia sinensis var. sinensis HOM05D007727 ORTHO05D009078 6.2e-10 68.2 94 43.6
Glyma.08G022800 Glycine max HOM05D007727 ORTHO05D009078 8.1e-10 67.8 105 43.8
Ciclev10022327m.g Citrus clementina HOM05D007727 ORTHO05D009078 1.1e-09 67.4 113 43.4
Gohir.A02G100000 Gossypium hirsutum HOM05D007727 ORTHO05D009078 1.4e-09 67.0 46 69.6
Medtr5g009290 Medicago truncatula HOM05D007727 ORTHO05D009078 1.8e-09 66.6 55 61.8
Oeu031672.1 Olea europaea HOM05D007727 ORTHO05D009078 9.0e-09 64.3 58 56.9
Oeu031673.1 Olea europaea HOM05D007727 ORTHO05D009078 9.0e-09 64.3 58 55.2
MELO3C016295.2 Cucumis melo HOM05D007727 ORTHO05D009078 1.2e-08 63.9 111 38.7
Lj4g0008549 Lotus japonicus HOM05D007727 ORTHO05D009078 1.2e-08 63.9 107 40.2
ECA240G1351 Erigeron canadensis HOM05D007727 ORTHO05D009078 2.6e-08 62.8 64 54.7
Nitab4.5_0001210g0030 Nicotiana tabacum HOM05D011491 ORTHO05D009078 2.6e-08 62.8 63 46.0
CsaV3_4G006600 Cucumis sativus L. HOM05D007727 ORTHO05D009078 3.4e-08 62.4 112 37.5
TPR.G3415 Trifolium pratense HOM05D007727 ORTHO05D009078 5.8e-08 61.6 68 45.6
TPR.G11121 Trifolium pratense HOM05D007727 ORTHO05D009078 7.6e-08 61.2 63 46.0
TPR.G25603 Trifolium pratense HOM05D007727 ORTHO05D009078 9.9e-08 60.8 55 60.0
ClCG07G011610 Citrullus lanatus HOM05D007727 ORTHO05D009078 1.3e-07 60.5 101 38.6
Glyma.05G217200 Glycine max HOM05D007727 ORTHO05D009078 1.3e-07 60.5 104 42.3
TPR.G3425 Trifolium pratense HOM05D007727 ORTHO05D009078 1.3e-07 60.5 63 46.0
TPR.G3394 Trifolium pratense HOM05D007727 ORTHO05D009078 1.7e-07 60.1 63 46.0
Sopen08g030640 Solanum pennellii HOM05D011491 ORTHO05D009078 3.8e-07 58.9 46 60.9
Sed0000706 Sechium edule HOM05D007727 ORTHO05D009078 4.9e-07 58.5 104 34.6
PGSC0003DMG400012146 Solanum tuberosum HOM05D011491 ORTHO05D009078 6.4e-07 58.2 57 52.6
AUR62010842 Chenopodium quinoa HOM05D007727 ORTHO05D009078 1.1e-06 57.4 45 55.6
Phvul.002G298200 Phaseolus vulgaris HOM05D007727 ORTHO05D009078 1.4e-06 57.0 120 35.8
Phvul.002G298600 Phaseolus vulgaris HOM05D007727 ORTHO05D009078 1.4e-06 57.0 120 35.8
AUR62019842 Chenopodium quinoa HOM05D007727 ORTHO05D009078 1.9e-06 56.6 45 53.3
Lalb_Chr05g0224131 Lupinus albus HOM05D007727 ORTHO05D009078 2.4e-06 56.2 109 36.7
Nitab4.5_0002782g0050 Nicotiana tabacum HOM05D011491 ORTHO05D009078 3.2e-06 55.8 46 56.5
PGSC0003DMG400012144 Solanum tuberosum HOM05D011491 ORTHO05D009078 4.2e-06 55.5 142 31.7
CAN.G1804.6 Capsicum annuum HOM05D011491 ORTHO05D009078 5.5e-06 55.1 47 53.2
PGSC0003DMG400012147 Solanum tuberosum HOM05D011491 ORTHO05D009078 5.5e-06 55.1 46 56.5
BcaNung04083 Brassica carinata HOM05D009622 ORTHO05D011757 9.3e-06 54.3 52 46.2
BcaNung04240 Brassica carinata HOM05D009622 ORTHO05D011757 9.3e-06 54.3 52 46.2
C07p53170 Brassica napus HOM05D009622 ORTHO05D011757 9.3e-06 54.3 52 46.2
BolC7t45813H Brassica oleracea HOM05D009622 ORTHO05D011757 9.3e-06 54.3 52 46.2
Medtr8g099485 Medicago truncatula HOM05D007727 ORTHO05D009078 9.3e-06 54.3 62 43.5
Psat2g185360 Pisum sativum HOM05D007727 ORTHO05D009078 9.3e-06 54.3 54 51.9
PGSC0003DMG400012145 Solanum tuberosum HOM05D011491 ORTHO05D009078 9.3e-06 54.3 46 56.5


User provided reference genes

Program Settings