Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.D01727 Eucalyptus grandis HOM05D007275 ORTHO05D009279 5.4e-47 190.7 96 100.0
Nn1g01839 Nelumbo nucifera HOM05D007275 ORTHO05D009279 3.5e-38 161.4 96 83.3
Dinv38844 Davidia involucrata HOM05D007275 ORTHO05D009279 1.7e-37 159.1 96 80.2
Nn3g19047 Nelumbo nucifera HOM05D007275 ORTHO05D009279 2.3e-37 158.7 96 81.2
GSVIVG01019513001 Vitis vinifera HOM05D007275 ORTHO05D009279 5.0e-37 157.5 96 81.2
Actinidia22145 Actinidia chinensis HOM05D007275 ORTHO05D009279 1.9e-36 155.6 96 80.2
QL02p030913 Quercus lobata HOM05D007275 ORTHO05D009279 1.9e-36 155.6 95 80.0
Ciclev10024283m.g Citrus clementina HOM05D007275 ORTHO05D009279 5.6e-36 154.1 94 78.7
PGR031G2423 Punica granatum HOM05D007275 ORTHO05D009279 9.5e-36 153.3 96 78.1
arahy.Tifrunner.gnm1.ann1.IALD8X Arachis hypogaea HOM05D007275 ORTHO05D009279 1.2e-35 152.9 94 77.7
CSS0010422 Camellia sinensis var. sinensis HOM05D007275 ORTHO05D009279 1.2e-35 152.9 94 77.7
Haze_08628 Corylus avellana HOM05D007275 ORTHO05D009279 1.2e-35 152.9 97 81.4
Sabra01G0069000 Salix brachista HOM05D007275 ORTHO05D009279 1.6e-35 152.5 94 81.9
Cfa012796 Carpinus fangiana HOM05D007275 ORTHO05D009279 2.1e-35 152.1 97 81.4
Gohir.D12G236900 Gossypium hirsutum HOM05D007275 ORTHO05D009279 2.1e-35 152.1 96 78.1
Gorai.008G253500 Gossypium raimondii HOM05D007275 ORTHO05D009279 2.1e-35 152.1 96 78.1
Sabra03G0100000 Salix brachista HOM05D007275 ORTHO05D009279 2.1e-35 152.1 93 79.6
Thecc.03G296000 Theobroma cacao HOM05D007275 ORTHO05D009279 2.1e-35 152.1 96 78.1
AUR62010827 Chenopodium quinoa HOM05D007275 ORTHO05D009279 3.6e-35 151.4 96 77.1
Gohir.A12G235700 Gossypium hirsutum HOM05D007275 ORTHO05D009279 4.7e-35 151.0 96 77.1
Gohir.D11G024100 Gossypium hirsutum HOM05D007275 ORTHO05D009279 4.7e-35 151.0 94 77.7
Gorai.007G025800 Gossypium raimondii HOM05D007275 ORTHO05D009279 4.7e-35 151.0 94 77.7
Potri.001G092700 Populus trichocarpa HOM05D007275 ORTHO05D009279 6.1e-35 150.6 94 79.8
TAR375G1117 Trochodendron aralioides HOM05D007275 ORTHO05D009279 6.1e-35 150.6 96 77.1
Gohir.A11G024400 Gossypium hirsutum HOM05D007275 ORTHO05D009279 8.0e-35 150.2 94 77.7
Hma1.2p1_0359F.1_g135280 Hydrangea macrophylla HOM05D007275 ORTHO05D009279 8.0e-35 150.2 96 78.1
arahy.Tifrunner.gnm1.ann1.GQP3LI Arachis hypogaea HOM05D007275 ORTHO05D009279 1.0e-34 149.8 94 75.5
Phvul.002G297500 Phaseolus vulgaris HOM05D007275 ORTHO05D009279 1.0e-34 149.8 96 77.1
Potri.003G138800 Populus trichocarpa HOM05D007275 ORTHO05D009279 1.0e-34 149.8 93 78.5
EL10Ac5g12903 Beta vulgaris HOM05D007275 ORTHO05D009279 1.8e-34 149.1 96 76.0
MBI06_g46619_MAGBIO Magnolia biondii HOM05D007275 ORTHO05D009279 2.3e-34 148.7 94 76.6
MBI06_g46730_MAGBIO Magnolia biondii HOM05D007275 ORTHO05D000022 2.3e-34 148.7 94 76.6
Manes.02G011100 Manihot esculenta HOM05D007275 ORTHO05D009279 2.3e-34 148.7 94 79.8
CAN.G532.107 Capsicum annuum HOM05D007275 ORTHO05D009279 5.2e-34 147.5 96 76.0
Peaxi162Scf00074g01033 Petunia axillaris HOM05D007275 ORTHO05D009279 5.2e-34 147.5 94 77.7
Hma1.2p1_0229F.1_g097175 Hydrangea macrophylla HOM05D007275 ORTHO05D009279 6.8e-34 147.1 97 76.3
Hma1.2p1_0229F.1_g097200 Hydrangea macrophylla HOM05D007275 ORTHO05D009279 6.8e-34 147.1 97 76.3
Cc08_g15930 Coffea canephora HOM05D007275 ORTHO05D009279 1.2e-33 146.4 96 76.0
Sc01g0010220 Simmondsia chinensis HOM05D007275 ORTHO05D009279 2.0e-33 145.6 96 75.0
CSS0024458 Camellia sinensis var. sinensis HOM05D007275 ORTHO05D009279 2.6e-33 145.2 96 75.0
MD14G1123400 Malus domestica HOM05D007275 ORTHO05D009279 2.6e-33 145.2 96 76.0
TAR629G0721 Trochodendron aralioides HOM05D007275 ORTHO05D010861 3.4e-33 144.8 97 75.3
MD06G1104700 Malus domestica HOM05D007275 ORTHO05D009279 5.8e-33 144.1 96 75.0
PGSC0003DMG400012158 Solanum tuberosum HOM05D007275 ORTHO05D009279 5.8e-33 144.1 96 74.0
COL.COLO4_10681 Corchorus olitorius HOM05D007275 ORTHO05D009279 9.8e-33 143.3 96 72.9
Glyma.08G022200 Glycine max HOM05D007275 ORTHO05D009279 9.8e-33 143.3 92 76.1
Nitab4.5_0010144g0020 Nicotiana tabacum HOM05D007275 ORTHO05D009279 9.8e-33 143.3 96 74.0
Atru.chr9.2015 Acer truncatum HOM05D007275 ORTHO05D009279 2.9e-32 141.7 94 73.4
Glyma.05G216300 Glycine max HOM05D007275 ORTHO05D009279 3.7e-32 141.4 92 75.0
Peaxi162Scf00117g01123 Petunia axillaris HOM05D007275 ORTHO05D009279 4.9e-32 141.0 96 72.9
Prupe.5G117300 Prunus persica HOM05D007275 ORTHO05D009279 4.9e-32 141.0 96 74.0
SalBow1G0766 Salvia bowleyana HOM05D007275 ORTHO05D009279 4.9e-32 141.0 96 71.9
TPR.G3422 Trifolium pratense HOM05D007275 ORTHO05D009279 4.9e-32 141.0 96 71.9
Nitab4.5_0000223g0330 Nicotiana tabacum HOM05D007275 ORTHO05D009279 8.3e-32 140.2 96 71.9
SalBow1G5261 Salvia bowleyana HOM05D007275 ORTHO05D009279 1.1e-31 139.8 96 70.8
Solyc08g082160.3 Solanum lycopersicum HOM05D007275 ORTHO05D009279 1.1e-31 139.8 96 72.9
Sopen08g030440 Solanum pennellii HOM05D007275 ORTHO05D009279 1.1e-31 139.8 96 72.9
CiPaw.12G084200 Carya illinoinensis HOM05D007275 ORTHO05D009279 1.9e-31 139.0 96 74.0
Lj4g0015273 Lotus japonicus HOM05D007275 ORTHO05D009279 2.4e-31 138.7 92 73.9
RcHm_v2.0_Chr7g0195121 Rosa chinensis HOM05D007275 ORTHO05D009279 7.0e-31 137.1 96 71.9
Dinv37542 Davidia involucrata HOM05D007275 ORTHO05D009279 9.2e-31 136.7 84 82.1
Lalb_Chr16g0390621 Lupinus albus HOM05D007275 ORTHO05D009279 9.2e-31 136.7 93 69.9
Nitab4.5_0000726g0090 Nicotiana tabacum HOM05D007275 ORTHO05D009279 1.6e-30 136.0 90 74.4
Oeu038573.1 Olea europaea HOM05D007275 ORTHO05D009279 2.0e-30 135.6 96 68.8
FvH4_5g04420 Fragaria vesca HOM05D007275 ORTHO05D009279 1.3e-29 132.9 97 69.1
FAN08G0060 Fragaria x ananassa HOM05D007275 ORTHO05D009279 1.3e-29 132.9 96 68.8
FAN18G1142 Fragaria x ananassa HOM05D007275 ORTHO05D009279 1.3e-29 132.9 97 69.1
FAN18G2266 Fragaria x ananassa HOM05D007275 ORTHO05D009279 1.3e-29 132.9 97 69.1
DCAR_005035 Daucus carota HOM05D007275 ORTHO05D009279 3.9e-29 131.3 94 68.1
TWI60G1254 Tripterygium wilfordii HOM05D007275 ORTHO05D009279 3.9e-29 131.3 92 70.7
Migut.A00668 Erythranthe guttata HOM05D007275 ORTHO05D009279 5.0e-29 131.0 93 68.8
Aqoxy7G00131 Aquilegia oxysepala HOM05D007275 ORTHO05D009279 8.6e-29 130.2 96 66.7
Lsat_1_v5_gn_3_10301 Lactuca sativa HOM05D007275 ORTHO05D009279 8.6e-29 130.2 94 67.0
CANSAT21G2355 Cannabis sativa HOM05D007275 ORTHO05D009279 1.1e-28 129.8 96 70.8
Medtr8g099385 Medicago truncatula HOM05D007275 ORTHO05D009279 1.1e-28 129.8 93 68.8
ECA246G4125 Erigeron canadensis HOM05D007275 ORTHO05D009279 2.5e-28 128.6 94 66.0
HanXRQChr06g0166541 Helianthus annuus HOM05D007275 ORTHO05D009279 7.3e-28 127.1 92 66.3
HanXRQChr17g0535191 Helianthus annuus HOM05D007275 ORTHO05D009279 9.5e-28 126.7 96 63.5
FvH4_3g01740 Fragaria vesca HOM05D007275 ORTHO05D009279 1.6e-27 125.9 97 66.0
CsaV3_4G006490 Cucumis sativus L. HOM05D007275 ORTHO05D009279 2.1e-27 125.6 93 66.7
Zm00001eb338790 Zea mays HOM05D007275 ORTHO05D009279 2.1e-27 125.6 97 67.0
MELO3C032816.2 Cucumis melo HOM05D007275 ORTHO05D009279 2.8e-27 125.2 92 67.4
ClCG07G014960 Citrullus lanatus HOM05D007275 ORTHO05D009279 1.8e-26 122.5 87 67.8
AUR62019826 Chenopodium quinoa HOM05D007275 ORTHO05D009279 5.2e-26 120.9 75 74.7
FAN13G1788 Fragaria x ananassa HOM05D007275 ORTHO05D009279 1.2e-25 119.8 125 54.4
Ah.12g052450 Amaranthus hybridus HOM05D006525 ORTHO05D007845 2.0e-25 119.0 75 74.7
ATR0320G041 Amborella trichopoda HOM05D007275 ORTHO05D009279 3.4e-25 118.2 91 64.8
Sed0004885 Sechium edule HOM05D007275 ORTHO05D009279 5.8e-25 117.5 93 65.6
unitig_748.g8124 Utricularia gibba HOM05D007275 ORTHO05D009279 2.9e-24 115.2 90 65.6
BcaC09g50944 Brassica carinata HOM05D007275 ORTHO05D009279 8.3e-24 113.6 94 56.4
BcaNung01088 Brassica carinata HOM05D007275 ORTHO05D009279 8.3e-24 113.6 94 57.4
BcaNung01089 Brassica carinata HOM05D007275 ORTHO05D009279 8.3e-24 113.6 94 57.4
A01p15130 Brassica napus HOM05D007275 ORTHO05D009279 8.3e-24 113.6 94 56.4
C01p19030 Brassica napus HOM05D007275 ORTHO05D009279 8.3e-24 113.6 94 56.4
BolC1t01829H Brassica oleracea HOM05D007275 ORTHO05D009279 8.3e-24 113.6 94 56.4
CSS0026606 Camellia sinensis var. sinensis HOM05D007275 ORTHO05D009279 3.2e-23 111.7 67 76.1
CDE10G0124 Ceratophyllum demersum HOM05D007275 ORTHO05D009279 4.1e-23 111.3 82 64.6
Hma1.2p1_2596F.1_g325120 Hydrangea macrophylla HOM05D007275 ORTHO05D009279 2.1e-22 109.0 69 78.3
CDE10G0242 Ceratophyllum demersum HOM05D000974 ORTHO05D002201 4.6e-22 107.8 83 63.9
Duzib068G1121 Durio zibethinus HOM05D007275 ORTHO05D009279 1.0e-21 106.7 71 77.5
Psat7g026480 Pisum sativum HOM05D007275 ORTHO05D009279 3.0e-21 105.1 92 60.9
Nitab4.5_0007661g0010 Nicotiana tabacum HOM05D007275 ORTHO05D009279 1.1e-20 103.2 75 66.7
SEGI_25349 Sequoiadendron giganteum HOM05D007275 ORTHO05D009279 4.3e-20 101.3 94 53.2
Oeu063532.1 Olea europaea HOM05D007275 ORTHO05D009279 9.5e-20 100.1 84 59.5
Rhsim02G0242000 Rhododendron simsii HOM05D007275 ORTHO05D009279 2.6e-17 92.0 67 70.1
FAN04G0348 Fragaria x ananassa HOM05D007275 ORTHO05D009279 1.4e-15 86.3 97 52.6
Thhalv10027148m.g Eutrema salsugineum HOM05D007275 ORTHO05D009279 1.5e-12 76.3 67 55.2
Lalb_Chr16g0390631 Lupinus albus HOM05D007275 ORTHO05D009279 7.3e-12 73.9 50 68.0
ECA236G1637 Erigeron canadensis HOM05D000015 ORTHO05D009146 1.4e-07 59.7 91 39.6
arahy.Tifrunner.gnm1.ann1.FEX8G7 Arachis hypogaea HOM05D000015 ORTHO05D003525 2.1e-06 55.8 56 50.0
arahy.Tifrunner.gnm1.ann1.FJ0G75 Arachis hypogaea HOM05D000015 ORTHO05D003525 2.1e-06 55.8 56 50.0
Aqoxy2G01184 Aquilegia oxysepala HOM05D000015 ORTHO05D009146 2.7e-06 55.5 99 37.4
Manes.17G027600 Manihot esculenta HOM05D000015 ORTHO05D009146 4.6e-06 54.7 95 36.8
Aqoxy1G02962 Aquilegia oxysepala HOM05D000015 ORTHO05D009146 6.0e-06 54.3 100 36.0
Rhsim13G0150400 Rhododendron simsii HOM05D000015 ORTHO05D009146 6.0e-06 54.3 99 37.4
Glyma.13G100100 Glycine max HOM05D000015 ORTHO05D003525 7.8e-06 53.9 107 34.6
Mapoly0053s0099 Marchantia polymorpha HOM05D000015 ORTHO05D003525 7.8e-06 53.9 70 41.4


User provided reference genes

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