Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.D01686 Eucalyptus grandis HOM05D007016 ORTHO05D008847 2.1e-138 495.7 254 100.0
PGR031G1249 Punica granatum HOM05D007016 ORTHO05D008847 8.5e-76 287.7 257 62.6
MD14G1125100 Malus domestica HOM05D007016 ORTHO05D008847 1.2e-74 283.9 239 62.8
Rhsim02G0251600 Rhododendron simsii HOM05D007016 ORTHO05D008847 3.4e-72 275.8 260 57.7
Thecc.03G221900 Theobroma cacao HOM05D007016 ORTHO05D008847 1.3e-71 273.9 238 62.2
Actinidia22202 Actinidia chinensis HOM05D007016 ORTHO05D008847 1.7e-71 273.5 234 62.4
Haze_14080 Corylus avellana HOM05D007016 ORTHO05D008847 1.7e-71 273.5 248 61.3
GSVIVG01019642001 Vitis vinifera HOM05D007016 ORTHO05D008847 2.2e-71 273.1 249 59.4
Cfa011932 Carpinus fangiana HOM05D007016 ORTHO05D008847 2.4e-70 269.6 236 60.6
Ciclev10021806m.g Citrus clementina HOM05D007016 ORTHO05D008847 4.1e-70 268.9 245 59.2
Duzib084G0025 Durio zibethinus HOM05D000458 ORTHO05D000951 7.0e-70 268.1 207 65.7
Prupe.5G128800 Prunus persica HOM05D007016 ORTHO05D008847 1.6e-69 266.9 235 65.1
Duzib205G1809 Durio zibethinus HOM05D007016 ORTHO05D008847 3.5e-69 265.8 248 59.7
Gorai.003G076500 Gossypium raimondii HOM05D007016 ORTHO05D008847 1.0e-68 264.2 222 60.8
vmacro11507 Vaccinium macrocarpon HOM05D007016 ORTHO05D008847 1.3e-68 263.8 246 57.3
Dinv12013 Davidia involucrata HOM05D007016 ORTHO05D008847 1.7e-68 263.5 215 63.7
Dinv34693 Davidia involucrata HOM05D007016 ORTHO05D008847 2.2e-68 263.1 215 63.3
MD06G1117700 Malus domestica HOM05D007016 ORTHO05D008847 2.9e-68 262.7 217 65.0
FAN04G1313 Fragaria x ananassa HOM05D007016 ORTHO05D008847 3.8e-68 262.3 244 61.9
FAN08G2008 Fragaria x ananassa HOM05D007016 ORTHO05D008847 1.9e-67 260.0 259 59.1
Potri.003G146100 Populus trichocarpa HOM05D007016 ORTHO05D008847 2.5e-67 259.6 261 56.7
CiPaw.12G078100 Carya illinoinensis HOM05D007016 ORTHO05D008847 4.7e-66 255.4 245 56.3
COL.COLO4_10789 Corchorus olitorius HOM05D000458 ORTHO05D000951 5.2e-65 251.9 243 57.2
TWI15G0571 Tripterygium wilfordii HOM05D007016 ORTHO05D008847 5.2e-65 251.9 239 56.9
Manes.02G003500 Manihot esculenta HOM05D007016 ORTHO05D008847 6.8e-65 251.5 210 61.4
FvH4_5g11000 Fragaria vesca HOM05D007016 ORTHO05D008847 1.2e-64 250.8 257 58.4
QL02p028324 Quercus lobata HOM05D007016 ORTHO05D008847 1.5e-64 250.4 207 60.4
Sabra03G0106200 Salix brachista HOM05D007016 ORTHO05D008847 1.5e-64 250.4 259 55.6
Sed0027229 Sechium edule HOM05D007016 ORTHO05D008847 2.0e-64 250.0 263 54.0
Glyma.01G230300 Glycine max HOM05D007016 ORTHO05D008847 9.8e-64 247.7 227 60.4
Nitab4.5_0004251g0050 Nicotiana tabacum HOM05D007016 ORTHO05D008847 1.3e-63 247.3 247 54.3
arahy.Tifrunner.gnm1.ann1.6JL1AX Arachis hypogaea HOM05D007016 ORTHO05D008847 2.2e-63 246.5 224 58.5
arahy.Tifrunner.gnm1.ann1.CXQL6Y Arachis hypogaea HOM05D007016 ORTHO05D008847 4.9e-63 245.4 256 53.9
CsaV3_5G001730 Cucumis sativus L. HOM05D007016 ORTHO05D008847 8.3e-63 244.6 237 57.4
TWI81G0911 Tripterygium wilfordii HOM05D007016 ORTHO05D008847 1.8e-62 243.4 220 58.2
ClCG01G001570 Citrullus lanatus HOM05D007016 ORTHO05D008847 2.4e-62 243.0 255 54.5
Atru.chr9.1899 Acer truncatum HOM05D007016 ORTHO05D008847 9.2e-62 241.1 208 60.1
Oeu022037.1 Olea europaea HOM05D007016 ORTHO05D008847 9.2e-62 241.1 248 56.5
RcHm_v2.0_Chr7g0186811 Rosa chinensis HOM05D007016 ORTHO05D008847 2.7e-61 239.6 239 56.9
TAR375G0929 Trochodendron aralioides HOM05D007016 ORTHO05D008847 3.5e-61 239.2 253 54.9
Peaxi162Scf00074g00350 Petunia axillaris HOM05D000458 ORTHO05D000951 4.5e-61 238.8 244 53.3
MBI04_g33411_MAGBIO Magnolia biondii HOM05D007016 ORTHO05D008847 1.0e-60 237.7 255 53.3
Haze_09164 Corylus avellana HOM05D007016 ORTHO05D008847 1.7e-60 236.9 252 54.8
VMungo1215G3083 Vigna mungo HOM05D007016 ORTHO05D008847 2.3e-60 236.5 206 60.7
Cc08_g16690 Coffea canephora HOM05D007016 ORTHO05D008847 5.0e-60 235.3 207 58.5
Ca_24467_v3 Cicer arietinum L. HOM05D007016 ORTHO05D008847 1.5e-59 233.8 205 62.4
Migut.O00796 Erythranthe guttata HOM05D007016 ORTHO05D008847 1.5e-59 233.8 250 52.8
Gohir.A02G097900 Gossypium hirsutum HOM05D007016 ORTHO05D008847 2.5e-59 233.0 241 53.1
Cpa.g.sc175.19 Carica papaya HOM05D007016 ORTHO05D008847 3.3e-59 232.6 185 62.7
Haze_09158 Corylus avellana HOM05D007016 ORTHO05D008847 4.3e-59 232.3 252 54.0
FAN18G1330 Fragaria x ananassa HOM05D007016 ORTHO05D008847 5.6e-59 231.9 295 50.8
Phvul.002G036800 Phaseolus vulgaris HOM05D007016 ORTHO05D008847 5.6e-59 231.9 228 56.1
HanXRQChr06g0166831 Helianthus annuus HOM05D007016 ORTHO05D008847 8.0e-58 228.0 210 53.8
Nitab4.5_0007063g0030 Nicotiana tabacum HOM05D007016 ORTHO05D008847 1.4e-57 227.3 282 47.2
Sc01g0010620 Simmondsia chinensis HOM05D007016 ORTHO05D008847 1.4e-57 227.3 224 56.7
ECA246G5308 Erigeron canadensis HOM05D007016 ORTHO05D008847 2.3e-57 226.5 199 55.8
AUR62007045 Chenopodium quinoa HOM05D007016 ORTHO05D008847 1.5e-56 223.8 253 53.4
MELO3C005780.2 Cucumis melo HOM05D007016 ORTHO05D008847 2.6e-56 223.0 226 56.6
Gohir.D03G085700 Gossypium hirsutum HOM05D007016 ORTHO05D008847 3.4e-56 222.6 222 54.1
Potri.001G084600 Populus trichocarpa HOM05D007016 ORTHO05D008847 4.4e-56 222.2 212 58.5
Medtr5g008220 Medicago truncatula HOM05D007016 ORTHO05D008847 7.5e-56 221.5 234 55.6
LjContig00222g0018079 Lotus japonicus HOM05D007016 ORTHO05D008847 1.3e-55 220.7 237 55.3
ATR0620G109 Amborella trichopoda HOM05D007016 ORTHO05D008847 2.9e-55 219.5 230 54.3
FAN13G1076 Fragaria x ananassa HOM05D007016 ORTHO05D008847 3.7e-55 219.2 240 56.2
SGA_v2.0_scaffold314G48366 Striga asiatica HOM05D007016 ORTHO05D008847 1.4e-54 217.2 217 55.3
Solyc08g083030.4 Solanum lycopersicum HOM05D007016 ORTHO05D008847 7.0e-54 214.9 248 51.6
DCAR_006538 Daucus carota HOM05D007016 ORTHO05D008847 9.2e-54 214.5 199 58.3
HPP92_022355 Vanilla planifolia HOM05D007016 ORTHO05D008847 1.2e-53 214.2 166 63.3
PGSC0003DMG400012122 Solanum tuberosum HOM05D007016 ORTHO05D008847 1.6e-53 213.8 248 50.8
EL10Ac5g12439 Beta vulgaris HOM05D007016 ORTHO05D008847 7.8e-53 211.5 243 49.8
Nn3g18888 Nelumbo nucifera HOM05D007016 ORTHO05D008847 1.0e-52 211.1 280 46.8
Aqoxy5G04260 Aquilegia oxysepala HOM05D007016 ORTHO05D008847 1.7e-52 210.3 244 49.6
Lsat_1_v5_gn_3_13941 Lactuca sativa HOM05D007016 ORTHO05D008847 6.6e-52 208.4 242 47.9
HPP92_022341 Vanilla planifolia HOM05D007016 ORTHO05D008847 6.6e-52 208.4 208 55.3
Sopen08g031240 Solanum pennellii HOM05D007016 ORTHO05D008847 1.1e-51 207.6 248 50.4
Zm00001eb428160 Zea mays HOM05D007016 ORTHO05D008847 2.5e-51 206.5 218 53.2
THA.LOC104809306 Tarenaya hassleriana HOM05D007016 ORTHO05D008847 5.6e-51 205.3 210 56.7
Os04g0585600 Oryza sativa ssp. japonica HOM05D007016 ORTHO05D008847 4.7e-50 202.2 211 53.1
Ah.07g197890 Amaranthus hybridus HOM05D007016 ORTHO05D008847 1.8e-49 200.3 242 47.9
Carub.0007s3342 Capsella rubella HOM05D007016 ORTHO05D008847 6.8e-49 198.4 191 58.6
A07p21030 Brassica napus HOM05D003273 ORTHO05D004023 8.9e-49 198.0 170 61.2
TPR.G38026 Trifolium pratense HOM05D007016 ORTHO05D008847 5.8e-48 195.3 183 59.6
BraA07t29790Z Brassica rapa HOM05D003273 ORTHO05D004023 7.5e-48 194.9 225 53.8
Thhalv10027936m.g Eutrema salsugineum HOM05D007016 ORTHO05D008847 9.8e-48 194.5 180 58.3
Lalb_Chr09g0320381 Lupinus albus HOM05D007016 ORTHO05D008847 3.7e-47 192.6 250 49.6
MSTRG.15575 Avicennia marina HOM05D007016 ORTHO05D008847 4.9e-47 192.2 231 48.5
CAN.G567.80 Capsicum annuum HOM05D007016 ORTHO05D008847 4.9e-47 192.2 222 53.2
CARHR212600 Cardamine hirsuta HOM05D007016 ORTHO05D008847 1.1e-46 191.0 188 55.9
PSO339G2192 Papaver somniferum HOM05D007016 ORTHO05D008847 1.1e-46 191.0 218 50.5
PSO339G4063 Papaver somniferum HOM05D007016 ORTHO05D008847 1.1e-46 191.0 218 50.9
BcaB06g27684 Brassica carinata HOM05D003273 ORTHO05D004023 1.9e-46 190.3 184 57.1
BcaC02g08900 Brassica carinata HOM05D003273 ORTHO05D004023 2.4e-46 189.9 136 66.2
Lsat_1_v5_gn_3_14061 Lactuca sativa HOM05D007016 ORTHO05D008847 3.2e-46 189.5 236 45.8
BolC4t26521H Brassica oleracea HOM05D003273 ORTHO05D004023 5.4e-46 188.7 156 59.6
A04p15110 Brassica napus HOM05D003273 ORTHO05D005100 7.0e-46 188.3 194 54.6
AL7G47260 Arabidopsis lyrata HOM05D007016 ORTHO05D008847 9.2e-46 188.0 201 54.7
BraA04t17152Z Brassica rapa HOM05D003273 ORTHO05D005100 9.2e-46 188.0 194 54.6
C04p49340 Brassica napus HOM05D003273 ORTHO05D005100 2.0e-45 186.8 192 53.6
Sp7g00170 Schrenkiella parvula HOM05D007016 ORTHO05D008847 2.7e-45 186.4 179 58.1
Aa31LG9G230 Aethionema arabicum HOM05D007016 ORTHO05D008847 4.6e-45 185.7 204 52.5
BcaC08g44572 Brassica carinata HOM05D003273 ORTHO05D004023 4.6e-45 185.7 196 56.1
AT5G41960 Arabidopsis thaliana HOM05D007016 ORTHO05D008847 1.0e-44 184.5 199 54.3
HanXRQChr17g0534751 Helianthus annuus HOM05D007016 ORTHO05D008847 2.3e-44 183.3 218 48.6
SEGI_36842 Sequoiadendron giganteum HOM05D007016 ORTHO05D008847 1.9e-43 180.3 212 43.9
C06p20380 Brassica napus HOM05D003273 ORTHO05D004023 9.5e-43 177.9 199 53.8
AUR62019909 Chenopodium quinoa HOM05D007016 ORTHO05D008847 3.6e-42 176.0 236 48.7
unitig_62.g23644 Utricularia gibba HOM05D007016 ORTHO05D008847 5.8e-40 168.7 243 44.9
Pp3c14_22240 Physcomitrium patens HOM05D007016 ORTHO05D008847 2.4e-38 163.3 130 60.8
MD16G1274000 Malus domestica HOM05D007016 ORTHO05D008847 1.7e-36 157.1 169 52.7
CDE07G1000 Ceratophyllum demersum HOM05D007016 ORTHO05D008847 2.3e-36 156.8 124 59.7
Mapoly0080s0071 Marchantia polymorpha HOM05D007016 ORTHO05D008847 1.6e-34 150.6 123 56.1
AagrBONN_evm.TU.Sc2ySwM_117.1459 Anthoceros agrestis HOM05D007016 ORTHO05D008847 1.4e-33 147.5 129 57.4
BolC6t37216H Brassica oleracea HOM05D007016 ORTHO05D008847 2.3e-33 146.7 186 50.0
SMO164G0130 Selaginella moellendorffii HOM05D007016 ORTHO05D008847 8.9e-33 144.8 123 55.3
CSS0028177 Camellia sinensis var. sinensis HOM05D007016 ORTHO05D008847 8.4e-31 138.3 251 37.8
Psat2g187480 Pisum sativum HOM05D007016 ORTHO05D008847 5.4e-30 135.6 90 70.0
CBR_g26222 Chara braunii HOM05D007016 ORTHO05D008847 7.8e-29 131.7 148 47.3
arahy.Tifrunner.gnm1.ann1.PIY4C5 Arachis hypogaea HOM05D007016 ORTHO05D008847 3.0e-28 129.8 85 71.8
Nitab4.5_0000051g0070 Nicotiana tabacum HOM05D007016 ORTHO05D008847 3.0e-28 129.8 171 48.5
Hund14199 Selenicereus undatus HOM05D007016 ORTHO05D008847 1.2e-26 124.4 109 62.4
CANSAT21G1603 Cannabis sativa HOM05D007016 ORTHO05D008847 1.4e-25 120.9 251 37.5
SEGI_07436 Sequoiadendron giganteum HOM05D007016 ORTHO05D008847 1.9e-22 110.5 100 55.0
arahy.Tifrunner.gnm1.ann1.HM96ZH Arachis hypogaea HOM05D007016 ORTHO05D008847 6.6e-20 102.1 113 50.4


User provided reference genes

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