Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.D01660 Eucalyptus grandis HOM05D008304 ORTHO05D004056 3.7e-36 154.5 83 100.0
QL02p027330 Quercus lobata HOM05D008304 ORTHO05D004056 5.4e-11 70.9 77 57.1
Actinidia22217 Actinidia chinensis HOM05D008304 ORTHO05D004056 4.5e-10 67.8 89 55.1
Cc08_g16980 Coffea canephora HOM05D008304 ORTHO05D004056 7.7e-10 67.0 87 52.9
Haze_09200 Corylus avellana HOM05D008304 ORTHO05D004056 1.3e-09 66.2 80 56.2
Cfa011898 Carpinus fangiana HOM05D008304 ORTHO05D004056 2.2e-09 65.5 80 56.2
Manes.01G055200 Manihot esculenta HOM05D008304 ORTHO05D004056 5.0e-09 64.3 76 56.6
TAR629G3464 Trochodendron aralioides HOM05D008304 ORTHO05D004056 5.0e-09 64.3 81 56.8
Dinv12896 Davidia involucrata HOM05D008304 ORTHO05D004056 1.9e-08 62.4 77 55.8
Duzib205G1739 Durio zibethinus HOM05D008304 ORTHO05D004056 1.9e-08 62.4 83 54.2
Gohir.A12G241800 Gossypium hirsutum HOM05D008304 ORTHO05D004056 3.2e-08 61.6 83 53.0
Gorai.008G260200 Gossypium raimondii HOM05D008304 ORTHO05D004056 3.2e-08 61.6 83 53.0
CANSAT21G0162 Cannabis sativa HOM05D008304 ORTHO05D004056 4.2e-08 61.2 79 50.6
COL.COLO4_10829 Corchorus olitorius HOM05D008304 ORTHO05D004056 4.2e-08 61.2 82 52.4
Sed0018210 Sechium edule HOM05D008304 ORTHO05D004056 4.2e-08 61.2 75 50.7
FvH4_5g10570 Fragaria vesca HOM05D008304 ORTHO05D004056 1.2e-07 59.7 81 48.1
FAN04G0709 Fragaria x ananassa HOM05D008304 ORTHO05D012179 1.2e-07 59.7 81 48.1
FAN13G2184 Fragaria x ananassa HOM05D008304 ORTHO05D012179 1.2e-07 59.7 81 48.1
FAN18G4101 Fragaria x ananassa HOM05D008304 ORTHO05D012179 1.2e-07 59.7 81 48.1
GSVIVG01019681001 Vitis vinifera HOM05D008304 ORTHO05D004056 1.2e-07 59.7 77 49.4
CSS0003921 Camellia sinensis var. sinensis HOM05D008304 ORTHO05D004056 1.6e-07 59.3 83 48.2
Gohir.D12G243000 Gossypium hirsutum HOM05D008304 ORTHO05D004056 1.6e-07 59.3 83 51.8
CiPaw.11G110100 Carya illinoinensis HOM05D008304 ORTHO05D004056 2.1e-07 58.9 79 54.4
CDE04G3503 Ceratophyllum demersum HOM05D008304 ORTHO05D004056 2.1e-07 58.9 76 52.6
ClCG01G001410 Citrullus lanatus HOM05D008304 ORTHO05D004056 2.7e-07 58.5 80 48.8
Cpa.g.sc37.98 Carica papaya HOM05D008304 ORTHO05D004056 4.7e-07 57.8 84 50.0
Thecc.03G217700 Theobroma cacao HOM05D008304 ORTHO05D004056 8.0e-07 57.0 82 50.0
HPP92_014946 Vanilla planifolia HOM05D005953 ORTHO05D004056 1.0e-06 56.6 72 52.8
HPP92_014983 Vanilla planifolia HOM05D005953 ORTHO05D004056 1.4e-06 56.2 72 52.8
Nitab4.5_0002520g0050 Nicotiana tabacum HOM05D008304 ORTHO05D004056 1.8e-06 55.8 85 47.1
Oeu042857.1 Olea europaea HOM05D008304 ORTHO05D004056 2.3e-06 55.5 75 53.3
Atru.chr9.1863 Acer truncatum HOM05D008304 ORTHO05D004056 3.0e-06 55.1 81 45.7
Dinv18759 Davidia involucrata HOM05D008304 ORTHO05D004056 3.0e-06 55.1 87 46.0
ATR0776G010 Amborella trichopoda HOM05D045262 ORTHO05D004056 5.2e-06 54.3 94 43.6
Gohir.A09G187800 Gossypium hirsutum HOM05D008304 ORTHO05D004056 5.2e-06 54.3 76 50.0
Gohir.D09G182600 Gossypium hirsutum HOM05D008304 ORTHO05D004056 5.2e-06 54.3 76 50.0
Gorai.006G204900 Gossypium raimondii HOM05D008304 ORTHO05D004056 5.2e-06 54.3 76 50.0
MD06G1122200 Malus domestica HOM05D008304 ORTHO05D004056 5.2e-06 54.3 81 44.4
Migut.E00724 Erythranthe guttata HOM05D008304 ORTHO05D004056 6.8e-06 53.9 77 44.2
MD14G1138600 Malus domestica HOM05D008304 ORTHO05D004056 6.8e-06 53.9 82 46.3
Nn1g06570 Nelumbo nucifera HOM05D005953 ORTHO05D004056 6.8e-06 53.9 79 46.8
Thecc.02G179300 Theobroma cacao HOM05D005953 ORTHO05D004056 6.8e-06 53.9 76 44.7


User provided reference genes

Program Settings