Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.D01575 Eucalyptus grandis HOM05D004325 ORTHO05D005470 1.4e-99 366.3 191 100.0
Eucgr.E02007 Eucalyptus grandis HOM05D004325 ORTHO05D005470 2.8e-95 352.1 191 96.9
Thecc.04G303800 Theobroma cacao HOM05D004325 ORTHO05D005470 4.7e-87 324.7 190 88.4
CANSAT78G0850 Cannabis sativa HOM05D004325 ORTHO05D005470 8.4e-84 313.9 193 86.0
COL.COLO4_34588 Corchorus olitorius HOM05D004325 ORTHO05D005470 8.4e-84 313.9 192 85.9
Duzib151G0878 Durio zibethinus HOM05D004325 ORTHO05D005470 1.4e-83 313.2 184 87.5
Cfa015290 Carpinus fangiana HOM05D004325 ORTHO05D005470 9.2e-83 310.5 192 85.4
RcHm_v2.0_Chr4g0425791 Rosa chinensis HOM05D004325 ORTHO05D005470 1.2e-82 310.1 190 83.7
Duzib052G1161 Durio zibethinus HOM05D004325 ORTHO05D005470 2.1e-82 309.3 192 84.4
Haze_01324 Corylus avellana HOM05D004325 ORTHO05D005470 2.7e-82 308.9 189 85.7
Gohir.A01G034900 Gossypium hirsutum HOM05D004325 ORTHO05D005470 6.0e-82 307.8 192 83.3
FvH4_4g20250 Fragaria vesca HOM05D004325 ORTHO05D005470 2.3e-81 305.8 191 82.2
Lalb_Chr12g0200831 Lupinus albus HOM05D004325 ORTHO05D005470 2.3e-81 305.8 189 84.1
Dinv44270 Davidia involucrata HOM05D004325 ORTHO05D005470 3.9e-81 305.1 191 84.8
Prupe.1G115000 Prunus persica HOM05D004325 ORTHO05D005470 3.9e-81 305.1 190 84.2
CSS0027180 Camellia sinensis var. sinensis HOM05D004325 ORTHO05D005470 5.1e-81 304.7 191 83.2
PGR004G2019 Punica granatum HOM05D004325 ORTHO05D005470 5.1e-81 304.7 190 84.2
Gohir.D01G023556 Gossypium hirsutum HOM05D004325 ORTHO05D005470 8.6e-81 303.9 192 82.8
Gorai.002G030800 Gossypium raimondii HOM05D004325 ORTHO05D005470 8.6e-81 303.9 192 82.8
Manes.03G206300 Manihot esculenta HOM05D004325 ORTHO05D005470 8.6e-81 303.9 191 82.7
Actinidia13352 Actinidia chinensis HOM05D004325 ORTHO05D005470 1.1e-80 303.5 185 85.4
arahy.Tifrunner.gnm1.ann1.NK7FC1 Arachis hypogaea HOM05D004325 ORTHO05D005470 1.1e-80 303.5 184 84.8
arahy.Tifrunner.gnm1.ann1.H88EK8 Arachis hypogaea HOM05D004325 ORTHO05D005470 1.5e-80 303.1 184 84.8
arahy.Tifrunner.gnm1.ann1.RG9184 Arachis hypogaea HOM05D004325 ORTHO05D005470 1.5e-80 303.1 184 84.8
Peaxi162Scf00228g00059 Petunia axillaris HOM05D004325 ORTHO05D005470 1.5e-80 303.1 190 82.6
VMungo0540G0568 Vigna mungo HOM05D004325 ORTHO05D005470 1.5e-80 303.1 191 83.2
Atru.chr4.3046 Acer truncatum HOM05D004325 ORTHO05D005470 2.5e-80 302.4 179 87.2
Cpa.g.sc9.38 Carica papaya HOM05D004325 ORTHO05D005470 7.3e-80 300.8 182 84.6
Medtr2g033830 Medicago truncatula HOM05D004325 ORTHO05D005470 9.6e-80 300.4 185 84.3
TAR362G0217 Trochodendron aralioides HOM05D004325 ORTHO05D005470 9.6e-80 300.4 189 83.1
MD16G1151300 Malus domestica HOM05D004325 ORTHO05D005470 1.2e-79 300.1 190 82.6
Ciclev10005911m.g Citrus clementina HOM05D004325 ORTHO05D005470 3.6e-79 298.5 184 83.7
Cc03_g00680 Coffea canephora HOM05D004325 ORTHO05D005470 3.6e-79 298.5 187 84.0
Potri.008G103400 Populus trichocarpa HOM05D004325 ORTHO05D005470 8.1e-79 297.4 197 80.7
Migut.N00036 Erythranthe guttata HOM05D004325 ORTHO05D005470 1.1e-78 297.0 181 84.0
Potri.010G147600 Populus trichocarpa HOM05D004325 ORTHO05D005470 1.1e-78 297.0 191 81.7
CARHR287830 Cardamine hirsuta HOM05D004325 ORTHO05D005470 1.4e-78 296.6 182 82.4
Rhsim02G0002800 Rhododendron simsii HOM05D004325 ORTHO05D005470 1.4e-78 296.6 185 83.2
MD13G1150800 Malus domestica HOM05D004325 ORTHO05D005470 2.4e-78 295.8 189 81.5
CSS0047955 Camellia sinensis var. sinensis HOM05D004325 ORTHO05D005470 3.1e-78 295.4 180 85.0
Sed0024233 Sechium edule HOM05D004325 ORTHO05D005470 3.1e-78 295.4 193 80.3
TAR633G1272 Trochodendron aralioides HOM05D004325 ORTHO05D005470 3.1e-78 295.4 189 81.5
Glyma.09G034400 Glycine max HOM05D004325 ORTHO05D005470 6.9e-78 294.3 185 82.7
Hma1.2p1_0013F.1_g008360 Hydrangea macrophylla HOM05D004325 ORTHO05D005470 6.9e-78 294.3 190 82.1
Sabra08G0078100 Salix brachista HOM05D004325 ORTHO05D005470 6.9e-78 294.3 191 80.6
Aa31LG11G8140 Aethionema arabicum HOM05D004325 ORTHO05D005470 8.9e-78 293.9 199 77.4
Ca_00969_v3 Cicer arietinum L. HOM05D004325 ORTHO05D005470 8.9e-78 293.9 187 82.9
PSO421G0271 Papaver somniferum HOM05D004325 ORTHO05D005470 8.9e-78 293.9 192 80.2
Psat1g162400 Pisum sativum HOM05D004325 ORTHO05D005470 8.9e-78 293.9 187 82.9
Glyma.15G139100 Glycine max HOM05D004325 ORTHO05D005470 1.2e-77 293.5 190 81.1
Solyc05g053390.4 Solanum lycopersicum HOM05D004325 ORTHO05D005470 2.0e-77 292.7 185 82.2
Carub.0008s0936 Capsella rubella HOM05D004325 ORTHO05D005470 2.6e-77 292.4 186 80.1
ECA233G2476 Erigeron canadensis HOM05D004325 ORTHO05D005470 2.6e-77 292.4 191 79.1
Phvul.006G119000 Phaseolus vulgaris HOM05D004325 ORTHO05D005470 2.6e-77 292.4 175 84.6
TPR.G30807 Trifolium pratense HOM05D004325 ORTHO05D005470 2.6e-77 292.4 184 82.6
Thhalv10004957m.g Eutrema salsugineum HOM05D004325 ORTHO05D005470 3.4e-77 292.0 186 79.6
Sopen05g031900 Solanum pennellii HOM05D004325 ORTHO05D005470 3.4e-77 292.0 183 82.5
AT5G49510 Arabidopsis thaliana HOM05D004325 ORTHO05D005470 4.4e-77 291.6 186 79.6
TWI73G0086 Tripterygium wilfordii HOM05D004325 ORTHO05D005470 4.4e-77 291.6 185 80.0
Lj6g0013793 Lotus japonicus HOM05D004325 ORTHO05D005470 5.8e-77 291.2 184 81.0
THA.LOC104827099 Tarenaya hassleriana HOM05D004325 ORTHO05D005470 7.6e-77 290.8 187 80.7
AL8G23260 Arabidopsis lyrata HOM05D004325 ORTHO05D005470 9.9e-77 290.4 186 79.0
CsaV3_3G015280 Cucumis sativus L. HOM05D004325 ORTHO05D005470 2.9e-76 288.9 191 80.1
FAN12G3971 Fragaria x ananassa HOM05D004325 ORTHO05D005470 2.9e-76 288.9 224 70.1
PSO832G3679 Papaver somniferum HOM05D004325 ORTHO05D005470 2.9e-76 288.9 191 79.1
MBI19_g03261_MAGBIO Magnolia biondii HOM05D004325 ORTHO05D005470 3.8e-76 288.5 174 84.5
ClCG05G006650 Citrullus lanatus HOM05D004325 ORTHO05D005470 4.9e-76 288.1 192 79.2
BcaB04g19615 Brassica carinata HOM05D004325 ORTHO05D005470 8.4e-76 287.3 185 77.8
Nitab4.5_0004165g0020 Nicotiana tabacum HOM05D004325 ORTHO05D005470 8.4e-76 287.3 178 81.5
Sp2g19810 Schrenkiella parvula HOM05D004325 ORTHO05D005470 8.4e-76 287.3 186 78.5
SpUn0021_0040 Schrenkiella parvula HOM05D004325 ORTHO05D005470 8.4e-76 287.3 186 78.5
Sc25g0003210 Simmondsia chinensis HOM05D004325 ORTHO05D005470 8.4e-76 287.3 189 78.8
PGSC0003DMG400027209 Solanum tuberosum HOM05D004325 ORTHO05D005470 1.1e-75 287.0 183 81.4
FAN07G0536 Fragaria x ananassa HOM05D004325 ORTHO05D005470 1.4e-75 286.6 233 67.8
MSTRG.24825 Avicennia marina HOM05D004325 ORTHO05D005470 1.9e-75 286.2 180 81.7
Sed0016650 Sechium edule HOM05D004325 ORTHO05D005470 1.9e-75 286.2 191 78.0
AUR62039261 Chenopodium quinoa HOM05D004325 ORTHO05D005470 4.2e-75 285.0 189 79.9
Nitab4.5_0000647g0250 Nicotiana tabacum HOM05D004325 ORTHO05D005470 4.2e-75 285.0 178 80.9
HanXRQChr17g0569361 Helianthus annuus HOM05D004325 ORTHO05D005470 5.4e-75 284.6 194 78.4
Os12g0562900 Oryza sativa ssp. japonica HOM05D004325 ORTHO05D005470 7.1e-75 284.3 172 84.3
THA.LOC104802708 Tarenaya hassleriana HOM05D004325 ORTHO05D005470 9.3e-75 283.9 188 78.7
Lsat_1_v5_gn_1_117981 Lactuca sativa HOM05D004325 ORTHO05D005470 1.2e-74 283.5 184 81.0
PSO063G1209 Papaver somniferum HOM05D004325 ORTHO05D005470 1.6e-74 283.1 191 77.5
Ah.13g071390 Amaranthus hybridus HOM05D004325 ORTHO05D005470 2.1e-74 282.7 188 80.3
PSO724G0368 Papaver somniferum HOM05D004325 ORTHO05D005470 2.1e-74 282.7 192 77.6
SGA_v2.0_scaffold528G52737 Striga asiatica HOM05D004325 ORTHO05D005470 2.1e-74 282.7 200 75.5
AUR62016229 Chenopodium quinoa HOM05D004325 ORTHO05D005470 2.7e-74 282.3 187 79.7
unitig_0.g2580 Utricularia gibba HOM05D004325 ORTHO05D005470 3.5e-74 282.0 182 79.1
Nitab4.5_0000177g0050 Nicotiana tabacum HOM05D004325 ORTHO05D005470 4.6e-74 281.6 189 77.2
Nitab4.5_0000891g0010 Nicotiana tabacum HOM05D004325 ORTHO05D005470 7.8e-74 280.8 189 77.2
A06p38330 Brassica napus HOM05D004325 ORTHO05D005470 1.0e-73 280.4 186 76.9
C07p39920 Brassica napus HOM05D004325 ORTHO05D005470 1.0e-73 280.4 186 76.9
BolC7t44524H Brassica oleracea HOM05D004325 ORTHO05D005470 1.0e-73 280.4 186 76.9
BraA06t26747Z Brassica rapa HOM05D004325 ORTHO05D005470 1.0e-73 280.4 186 76.9
BraA09t36122Z Brassica rapa HOM05D004325 ORTHO05D005470 1.0e-73 280.4 187 76.5
BcaC04g23736 Brassica carinata HOM05D004325 ORTHO05D005470 1.3e-73 280.0 187 76.5
C09p05230 Brassica napus HOM05D004325 ORTHO05D005470 1.3e-73 280.0 187 76.5
A09p04850 Brassica napus HOM05D004325 ORTHO05D005470 3.0e-73 278.9 187 76.5
Eucgr.E01999 Eucalyptus grandis HOM05D004325 ORTHO05D005470 5.1e-73 278.1 191 80.6
vmacro15176 Vaccinium macrocarpon HOM05D004325 ORTHO05D005470 8.7e-73 277.3 226 68.6
Hund03133 Selenicereus undatus HOM05D004325 ORTHO05D005470 1.9e-72 276.2 188 77.1
HPP92_027563 Vanilla planifolia HOM05D004325 ORTHO05D005470 2.5e-72 275.8 199 74.4
Zm00001eb028520 Zea mays HOM05D004325 ORTHO05D005470 2.5e-72 275.8 182 78.0
Zm00001eb136920 Zea mays HOM05D004325 ORTHO05D005470 2.5e-72 275.8 182 77.5
ATR0693G272 Amborella trichopoda HOM05D004325 ORTHO05D005470 3.3e-72 275.4 182 76.9
Sabra10G0113800 Salix brachista HOM05D004325 ORTHO05D005470 2.8e-71 272.3 237 65.8
Hund11985 Selenicereus undatus HOM05D004325 ORTHO05D005470 3.6e-71 271.9 185 76.8
CDE01G0033 Ceratophyllum demersum HOM05D004325 ORTHO05D005470 8.1e-71 270.8 183 75.4
Lj3A833G34 Lonicera japonica HOM05D004325 ORTHO05D005470 2.6e-69 265.8 156 87.8
Aqoxy3G01635 Aquilegia oxysepala HOM05D004325 ORTHO05D005470 6.4e-68 261.2 179 77.1
TWI09G1034 Tripterygium wilfordii HOM05D004325 ORTHO05D005470 1.1e-67 260.4 190 73.7
EL10Ac3g05527 Beta vulgaris HOM05D004325 ORTHO05D005470 3.9e-65 251.9 164 81.7
BolC9t53449H Brassica oleracea HOM05D004325 ORTHO05D005470 3.9e-65 251.9 247 57.5
SalBow5G2618 Salvia bowleyana HOM05D004325 ORTHO05D005470 8.7e-65 250.8 152 84.2
Nn3g21742 Nelumbo nucifera HOM05D004325 ORTHO05D005470 3.6e-63 245.4 192 72.9
Mapoly0057s0039 Marchantia polymorpha HOM05D004325 ORTHO05D005470 8.4e-60 234.2 169 68.6
CAN.G945.3 Capsicum annuum HOM05D004325 ORTHO05D005470 5.5e-59 231.5 140 82.9
GSVIVG01034969001 Vitis vinifera HOM05D004325 ORTHO05D005470 1.2e-58 230.3 136 88.2
SEGI_09014 Sequoiadendron giganteum HOM05D004325 ORTHO05D005470 1.0e-57 227.3 179 65.4
SMO116G0307 Selaginella moellendorffii HOM05D004325 ORTHO05D005470 6.7e-57 224.6 179 64.2
CiPaw.01G136700 Carya illinoinensis HOM05D004325 ORTHO05D005470 1.1e-56 223.8 136 85.3
TPR.G28959 Trifolium pratense HOM05D004325 ORTHO05D005470 3.3e-56 222.2 140 80.7
Oeu001162.1 Olea europaea HOM05D004325 ORTHO05D005470 5.6e-56 221.5 136 83.8
Pp3c8_18130 Physcomitrium patens HOM05D004325 ORTHO05D005470 8.1e-55 217.6 190 60.5
AagrBONN_evm.TU.Sc2ySwM_344.4436 Anthoceros agrestis HOM05D004325 ORTHO05D005470 4.5e-53 211.8 184 58.7
Eucgr.E01982 Eucalyptus grandis HOM05D004325 ORTHO05D005470 3.2e-51 205.7 123 87.0
Lalb_Chr13g0298551 Lupinus albus HOM05D004325 ORTHO05D005470 4.2e-51 205.3 135 79.3
CiPaw.02G073600 Carya illinoinensis HOM05D004325 ORTHO05D005470 2.3e-49 199.5 204 60.8
MELO3C006723.2 Cucumis melo HOM05D004325 ORTHO05D005470 3.0e-49 199.1 138 75.4
Sopen01g024490 Solanum pennellii HOM05D004325 ORTHO05D005470 4.1e-46 188.7 110 88.2
HPP92_017247 Vanilla planifolia HOM05D004325 ORTHO05D005470 4.1e-46 188.7 126 79.4
CDE12G0495 Ceratophyllum demersum HOM05D004325 ORTHO05D005470 6.9e-46 188.0 131 74.8
MSTRG.3849 Avicennia marina HOM05D004325 ORTHO05D005470 2.2e-44 183.0 126 71.4
Eucgr.D01586 Eucalyptus grandis HOM05D004325 ORTHO05D005470 8.5e-44 181.0 100 91.0
Eucgr.D01598 Eucalyptus grandis HOM05D004325 ORTHO05D005470 3.9e-41 172.2 109 83.5
QL06p012738 Quercus lobata HOM05D004325 ORTHO05D005470 1.9e-40 169.9 99 86.9
Actinidia18462 Actinidia chinensis HOM05D004325 ORTHO05D005470 4.8e-39 165.2 114 75.4
Eucgr.D01580 Eucalyptus grandis HOM05D004325 ORTHO05D005470 6.3e-39 164.9 93 90.3
PRCOL_00000812 Prasinoderma coloniale HOM05D004325 ORTHO05D005470 1.1e-35 154.1 184 45.1
Eucgr.D01581 Eucalyptus grandis HOM05D004325 ORTHO05D005470 2.1e-34 149.8 82 93.9
MCO08G322 Micromonas commoda HOM05D004325 ORTHO05D005470 1.8e-33 146.7 167 44.9
Eucgr.D01577 Eucalyptus grandis HOM05D004325 ORTHO05D005470 3.9e-33 145.6 102 78.4
HPP92_017255 Vanilla planifolia HOM05D004325 ORTHO05D005470 2.6e-32 142.9 102 76.5
Dinv15146 Davidia involucrata HOM05D004325 ORTHO05D005470 1.8e-30 136.7 102 70.6
QL06p012730 Quercus lobata HOM05D004325 ORTHO05D005470 4.1e-30 135.6 93 78.5
Haze_26161 Corylus avellana HOM05D004325 ORTHO05D005470 1.0e-28 131.0 168 41.1
Cre06.g261650 Chlamydomonas reinhardtii HOM05D004325 ORTHO05D005470 1.7e-28 130.2 179 38.5
DCAR_026989 Daucus carota HOM05D004325 ORTHO05D005470 8.5e-28 127.9 89 75.3
Glyma.07G238200 Glycine max HOM05D004325 ORTHO05D005470 4.2e-27 125.6 75 84.0
Glyma.17G035301 Glycine max HOM05D004325 ORTHO05D005470 2.1e-26 123.2 101 68.3
CBR_g12436 Chara braunii HOM05D004325 ORTHO05D005470 1.8e-25 120.2 88 64.8
MBI14_g36884_MAGBIO Magnolia biondii HOM05D004325 ORTHO05D005470 6.7e-25 118.2 104 63.5
Actinidia31558 Actinidia chinensis HOM05D004325 ORTHO05D005470 2.0e-21 106.7 67 82.1
Eucgr.E01978 Eucalyptus grandis HOM05D004325 ORTHO05D005470 6.5e-20 101.7 60 85.0
TPR.G26018 Trifolium pratense HOM05D004325 ORTHO05D049290 5.9e-13 78.6 47 87.2
CSS0004484 Camellia sinensis var. sinensis HOM05D004325 ORTHO05D022134 1.3e-12 77.4 111 46.8
CSS0039135 Camellia sinensis var. sinensis HOM05D004325 ORTHO05D022134 2.9e-12 76.3 114 45.6
CSS0044452 Camellia sinensis var. sinensis HOM05D004325 ORTHO05D022134 2.9e-12 76.3 114 45.6
CSS0013046 Camellia sinensis var. sinensis HOM05D004325 ORTHO05D022134 6.5e-12 75.1 114 45.6
CSS0031168 Camellia sinensis var. sinensis HOM05D004325 ORTHO05D022134 1.1e-11 74.3 114 44.7
Solyc01g058597.1 Solanum lycopersicum HOM05D004325 ORTHO05D005470 9.4e-11 71.2 49 71.4
TPR.G25439 Trifolium pratense HOM05D004325 ORTHO05D005470 2.7e-10 69.7 115 43.5
Actinidia14254 Actinidia chinensis HOM05D004325 ORTHO05D005470 1.5e-08 63.9 36 86.1
Glyma.07G158050 Glycine max HOM05D004325 ORTHO05D022134 9.1e-06 54.7 53 58.5


User provided reference genes

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