Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.D01443 Eucalyptus grandis HOM05D004683 ORTHO05D005388 1.6e-206 722.6 385 100.0
PGR004G0928 Punica granatum HOM05D004683 ORTHO05D005388 3.3e-103 379.4 395 59.5
Manes.09G081701 Manihot esculenta HOM05D004683 ORTHO05D005388 3.6e-94 349.4 387 56.8
Prupe.4G006700 Prunus persica HOM05D004683 ORTHO05D005388 5.2e-93 345.5 385 56.6
RcHm_v2.0_Chr5g0000761 Rosa chinensis HOM05D004683 ORTHO05D005388 4.4e-92 342.4 385 57.1
Cfa000066 Carpinus fangiana HOM05D004683 ORTHO05D005388 4.1e-90 335.9 395 54.9
CSS0016540 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 1.2e-89 334.3 408 54.9
ClCG01G010700 Citrullus lanatus HOM05D004683 ORTHO05D005388 1.2e-89 334.3 394 56.3
Duzib160G0680 Durio zibethinus HOM05D004683 ORTHO05D005388 1.2e-89 334.3 389 55.3
Sed0018998 Sechium edule HOM05D004683 ORTHO05D005388 2.1e-89 333.6 392 55.9
MELO3C025532.2 Cucumis melo HOM05D004683 ORTHO05D005388 3.5e-89 332.8 404 55.4
CsaV3_UNG061480 Cucumis sativus L. HOM05D004683 ORTHO05D005388 7.8e-89 331.6 391 56.3
MD10G1336700 Malus domestica HOM05D004683 ORTHO05D005388 1.1e-87 327.8 385 55.1
Actinidia11898 Actinidia chinensis HOM05D004683 ORTHO05D005388 1.5e-87 327.4 393 55.0
Duzib235G0361 Durio zibethinus HOM05D004683 ORTHO05D005388 2.1e-86 323.6 384 54.7
Potri.006G017200 Populus trichocarpa HOM05D004683 ORTHO05D005388 3.6e-86 322.8 384 54.7
Atru.chr1.2335 Acer truncatum HOM05D004683 ORTHO05D005388 3.1e-85 319.7 395 53.2
CSS0018655 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 5.2e-85 318.9 413 53.0
FvH4_3g00551 Fragaria vesca HOM05D004683 ORTHO05D005388 6.8e-85 318.5 386 53.1
FAN25G2373 Fragaria x ananassa HOM05D004683 ORTHO05D005388 6.8e-85 318.5 386 53.4
Sabra06G0012200 Salix brachista HOM05D004683 ORTHO05D005388 6.8e-85 318.5 385 54.8
COL.COLO4_15259 Corchorus olitorius HOM05D004683 ORTHO05D005388 1.2e-84 317.8 396 54.5
Actinidia39280 Actinidia chinensis HOM05D004683 ORTHO05D005388 2.0e-84 317.0 392 53.6
Potri.016G008400 Populus trichocarpa HOM05D004683 ORTHO05D005388 2.0e-84 317.0 389 53.2
CiPaw.09G105900 Carya illinoinensis HOM05D004683 ORTHO05D005388 2.6e-84 316.6 400 53.5
Nitab4.5_0001668g0040 Nicotiana tabacum HOM05D004683 ORTHO05D005388 2.6e-84 316.6 387 52.7
CsaV3_1G015800 Cucumis sativus L. HOM05D004683 ORTHO05D005388 3.4e-84 316.2 336 60.1
TAR626G1909 Trochodendron aralioides HOM05D004683 ORTHO05D005388 3.4e-84 316.2 417 50.4
Solyc11g012610.2 Solanum lycopersicum HOM05D004683 ORTHO05D005388 4.4e-84 315.8 385 53.0
PGSC0003DMG400013358 Solanum tuberosum HOM05D004683 ORTHO05D005388 7.6e-84 315.1 386 52.3
CANSAT56G4109 Cannabis sativa HOM05D004683 ORTHO05D005388 9.9e-84 314.7 396 52.8
CAN.G696.10 Capsicum annuum HOM05D004683 ORTHO05D005388 1.3e-83 314.3 389 50.9
Gorai.010G188900 Gossypium raimondii HOM05D004683 ORTHO05D005388 1.4e-82 310.8 373 53.9
Gohir.D06G161900 Gossypium hirsutum HOM05D004683 ORTHO05D005388 9.2e-82 308.1 373 53.4
MBI19_g44082_MAGBIO Magnolia biondii HOM05D004683 ORTHO05D005388 9.2e-82 308.1 389 53.5
Gohir.A06G155500 Gossypium hirsutum HOM05D004683 ORTHO05D005388 1.2e-81 307.8 373 53.6
Peaxi162Scf00352g01036 Petunia axillaris HOM05D004683 ORTHO05D005388 2.7e-81 306.6 386 51.0
MD00G1058000 Malus domestica HOM05D004683 ORTHO05D005388 3.5e-81 306.2 384 53.9
Dinv04407 Davidia involucrata HOM05D004683 ORTHO05D005388 4.6e-81 305.8 351 56.7
Nn1g07478 Nelumbo nucifera HOM05D004683 ORTHO05D005388 1.7e-80 303.9 410 50.5
Thecc.06G237400 Theobroma cacao HOM05D004683 ORTHO05D005388 3.9e-80 302.8 393 51.4
GSVIVG01007216001 Vitis vinifera HOM05D004683 ORTHO05D005388 8.6e-80 301.6 326 55.5
Aqoxy4G02236 Aquilegia oxysepala HOM05D004683 ORTHO05D005388 4.3e-79 299.3 411 49.6
Lj6g0001835 Lotus japonicus HOM05D004683 ORTHO05D005388 7.3e-79 298.5 402 51.0
Phvul.006G141000 Phaseolus vulgaris HOM05D004683 ORTHO05D005388 1.2e-78 297.7 381 52.8
THA.LOC104806735 Tarenaya hassleriana HOM05D004683 ORTHO05D005388 2.0e-76 290.4 380 52.4
Gohir.D10G008100 Gossypium hirsutum HOM05D004683 ORTHO05D005388 4.4e-76 289.3 356 53.9
Gohir.A10G008300 Gossypium hirsutum HOM05D004683 ORTHO05D005388 7.6e-76 288.5 356 53.4
Lj2A259T33 Lonicera japonica HOM05D004683 ORTHO05D005388 1.7e-75 287.3 391 49.4
Sabra16G0012800 Salix brachista HOM05D004683 ORTHO05D005388 2.2e-75 287.0 405 50.1
Gorai.011G008800 Gossypium raimondii HOM05D004683 ORTHO05D005388 1.4e-74 284.3 356 53.4
Cc09_g00590 Coffea canephora HOM05D004683 ORTHO05D005388 2.4e-74 283.5 334 54.8
Lsat_1_v5_gn_7_14120 Lactuca sativa HOM05D004683 ORTHO05D005388 9.3e-74 281.6 400 51.2
TWI63G0041 Tripterygium wilfordii HOM05D004683 ORTHO05D005388 1.2e-73 281.2 389 49.4
Sc05g0009730 Simmondsia chinensis HOM05D004683 ORTHO05D005388 2.1e-73 280.4 340 52.6
Peaxi162Scf01544g00025 Petunia axillaris HOM05D004683 ORTHO05D005388 3.5e-73 279.6 323 52.6
TWI38G0781 Tripterygium wilfordii HOM05D004683 ORTHO05D005388 3.5e-73 279.6 391 50.4
Oeu052851.1 Olea europaea HOM05D004683 ORTHO05D005388 4.6e-73 279.3 314 56.1
Hma1.2p1_0657F.1_g196900 Hydrangea macrophylla HOM05D004683 ORTHO05D005388 1.0e-72 278.1 375 50.4
Haze_06980 Corylus avellana HOM05D004683 ORTHO05D005388 3.0e-72 276.6 402 48.5
PGSC0003DMG400023555 Solanum tuberosum HOM05D004683 ORTHO05D005388 8.7e-72 275.0 377 49.1
CSS0042800 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 3.3e-71 273.1 331 55.3
QL05p068304 Quercus lobata HOM05D004683 ORTHO05D005388 6.2e-70 268.9 399 48.6
Medtr2g026550 Medicago truncatula HOM05D004683 ORTHO05D005388 2.4e-69 266.9 383 50.7
Lalb_Chr15g0088101 Lupinus albus HOM05D004683 ORTHO05D005388 5.3e-69 265.8 382 50.3
QL05p068796 Quercus lobata HOM05D004683 ORTHO05D005388 9.0e-69 265.0 396 49.0
arahy.Tifrunner.gnm1.ann1.5M71YA Arachis hypogaea HOM05D004683 ORTHO05D005388 2.0e-68 263.8 396 47.2
Oeu052866.1 Olea europaea HOM05D004683 ORTHO05D005388 2.0e-68 263.8 337 52.8
arahy.Tifrunner.gnm1.ann1.L4TARN Arachis hypogaea HOM05D004683 ORTHO05D005388 3.4e-68 263.1 396 47.2
Lsat_1_v5_gn_0_24381 Lactuca sativa HOM05D004683 ORTHO05D005388 1.1e-66 258.1 328 54.9
PSO541G4951 Papaver somniferum HOM05D004683 ORTHO05D005388 1.1e-66 258.1 404 47.0
PSO675G6369 Papaver somniferum HOM05D004683 ORTHO05D005388 5.4e-66 255.8 416 45.7
SalBow8G0627 Salvia bowleyana HOM05D004683 ORTHO05D005388 2.7e-65 253.4 401 46.1
DCAR_030854 Daucus carota HOM05D004683 ORTHO05D005388 3.5e-65 253.1 384 46.9
Nitab4.5_0004646g0030 Nicotiana tabacum HOM05D004683 ORTHO05D005388 1.0e-64 251.5 390 46.9
Hund21139 Selenicereus undatus HOM05D004683 ORTHO05D005388 6.7e-64 248.8 335 49.9
Ah.14g087460 Amaranthus hybridus HOM05D004683 ORTHO05D005388 8.7e-64 248.4 328 50.3
AUR62021828 Chenopodium quinoa HOM05D004683 ORTHO05D005388 1.1e-63 248.1 323 48.9
EL10Ac8g20240 Beta vulgaris HOM05D004683 ORTHO05D005388 1.5e-63 247.7 362 47.0
Oeu030103.1 Olea europaea HOM05D004683 ORTHO05D005388 1.5e-63 247.7 386 45.9
ATR0624G003 Amborella trichopoda HOM05D004683 ORTHO05D005388 2.5e-63 246.9 354 49.2
SGA_v2.0_scaffold7G03714 Striga asiatica HOM05D004683 ORTHO05D005388 2.8e-62 243.4 377 47.7
CDE04G2289 Ceratophyllum demersum HOM05D004683 ORTHO05D005388 4.8e-62 242.7 326 50.0
AUR62012829 Chenopodium quinoa HOM05D004683 ORTHO05D005388 6.2e-62 242.3 323 48.3
HanXRQChr15g0470281 Helianthus annuus HOM05D004683 ORTHO05D005388 8.1e-62 241.9 352 50.6
Glyma.15G117000 Glycine max HOM05D004683 ORTHO05D005388 1.2e-60 238.0 390 44.4
Aa31LG6G60 Aethionema arabicum HOM05D004683 ORTHO05D005388 2.6e-60 236.9 343 47.8
Cpa.g.sc27.252 Carica papaya HOM05D004683 ORTHO05D005388 5.8e-60 235.7 307 53.1
Sopen04g006980 Solanum pennellii HOM05D004683 ORTHO05D005388 4.9e-59 232.6 384 43.8
TPR.G10575 Trifolium pratense HOM05D004683 ORTHO05D005388 4.9e-59 232.6 373 46.6
VMungo0540G0168 Vigna mungo HOM05D004683 ORTHO05D005388 6.4e-59 232.3 381 45.4
Rhsim02G0091200 Rhododendron simsii HOM05D004683 ORTHO05D005388 1.1e-58 231.5 389 45.5
BcaC09g50454 Brassica carinata HOM05D004683 ORTHO05D005388 5.5e-58 229.2 367 48.2
C01p25270 Brassica napus HOM05D004683 ORTHO05D005388 5.5e-58 229.2 367 48.2
Glyma.09G012400 Glycine max HOM05D004683 ORTHO05D005388 5.5e-58 229.2 394 44.4
Solyc04g014850.3 Solanum lycopersicum HOM05D004683 ORTHO05D005388 9.3e-58 228.4 384 43.0
Thhalv10025641m.g Eutrema salsugineum HOM05D004683 ORTHO05D005388 1.2e-57 228.0 371 48.2
Psat1g173720 Pisum sativum HOM05D004683 ORTHO05D005388 1.2e-57 228.0 375 47.2
BolC1t02477H Brassica oleracea HOM05D004683 ORTHO05D005388 1.6e-57 227.6 367 48.0
Carub.0007s2417 Capsella rubella HOM05D004683 ORTHO05D005388 1.6e-57 227.6 370 47.6
Migut.M01430 Erythranthe guttata HOM05D004683 ORTHO05D005388 2.7e-57 226.9 378 44.7
Sp7g16950 Schrenkiella parvula HOM05D004683 ORTHO05D005388 1.0e-56 224.9 379 47.0
A01p20140 Brassica napus HOM05D004683 ORTHO05D005388 1.3e-56 224.6 367 48.2
BraA01t01938Z Brassica rapa HOM05D004683 ORTHO05D005388 1.8e-56 224.2 325 51.1
AL7G37470 Arabidopsis lyrata HOM05D004683 ORTHO05D005388 6.7e-56 222.2 370 47.6
AT4G17240 Arabidopsis thaliana HOM05D004683 ORTHO05D005388 2.5e-55 220.3 370 47.0
CARHR223850 Cardamine hirsuta HOM05D004683 ORTHO05D005388 2.1e-54 217.2 369 46.9
Ca_00746_v3 Cicer arietinum L. HOM05D004683 ORTHO05D005388 8.2e-54 215.3 305 49.8
Ah.09g234040 Amaranthus hybridus HOM05D004683 ORTHO05D005388 6.9e-53 212.2 328 47.0
Sabra16G0012500 Salix brachista HOM05D004683 ORTHO05D005388 6.9e-53 212.2 262 56.5
Ciclev10017876m.g Citrus clementina HOM05D004683 ORTHO05D005388 5.8e-52 209.1 393 43.5
HPP92_014031 Vanilla planifolia HOM05D004683 ORTHO05D005388 7.6e-52 208.8 395 42.5
vmacro15736 Vaccinium macrocarpon HOM05D004683 ORTHO05D005388 4.2e-50 203.0 394 42.1
CDE06G0298 Ceratophyllum demersum HOM05D000165 ORTHO05D005388 1.3e-48 198.0 292 49.3
HPP92_028363 Vanilla planifolia HOM05D004683 ORTHO05D005388 4.3e-47 193.0 425 39.3
TAR341G0001 Trochodendron aralioides HOM05D004683 ORTHO05D005388 1.8e-45 187.6 283 49.5
TAR485G0001 Trochodendron aralioides HOM05D004683 ORTHO05D005388 1.8e-45 187.6 283 49.5
Nitab4.5_0001109g0120 Nicotiana tabacum HOM05D004683 ORTHO05D005388 2.0e-44 184.1 390 40.5
unitig_37.g12183 Utricularia gibba HOM05D004683 ORTHO05D005388 1.3e-43 181.4 220 50.0
CAN.G1263.24 Capsicum annuum HOM05D004683 ORTHO05D005388 9.3e-42 175.3 275 47.3
MSTRG.7144 Avicennia marina HOM05D004683 ORTHO05D005388 4.6e-41 172.9 277 45.1
SEGI_35929 Sequoiadendron giganteum HOM05D004683 ORTHO05D005388 4.6e-41 172.9 336 39.0
Sopen11g007340 Solanum pennellii HOM05D004683 ORTHO05D005388 6.7e-40 169.1 172 53.5
Zm00001eb057420 Zea mays HOM05D004683 ORTHO05D005388 1.4e-37 161.4 404 38.4
Zm00001eb214850 Zea mays HOM05D004683 ORTHO05D005388 2.4e-37 160.6 384 38.0
BcaNung00108 Brassica carinata HOM05D004683 ORTHO05D005388 1.7e-35 154.5 238 49.2
ECA246G4668 Erigeron canadensis HOM05D004683 ORTHO05D005388 1.1e-34 151.8 301 39.5
PSO339G0967 Papaver somniferum HOM05D004683 ORTHO05D005388 1.3e-27 128.3 107 63.6
Os03g0750900 Oryza sativa ssp. japonica HOM05D004683 ORTHO05D005388 4.2e-26 123.2 253 41.9
MSTRG.16041 Avicennia marina HOM05D004683 ORTHO05D005388 9.4e-26 122.1 149 53.0
MSTRG.14824 Avicennia marina HOM05D004683 ORTHO05D005388 2.7e-25 120.6 119 60.5
CSS0001859 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 3.0e-24 117.1 210 49.0
CSS0027604 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 3.0e-24 117.1 210 49.0
CDE04G1899 Ceratophyllum demersum HOM05D004683 ORTHO05D005388 6.7e-24 115.9 324 34.6
CSS0011389 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 3.3e-23 113.6 126 50.8
Sopen00g010710 Solanum pennellii HOM05D004683 ORTHO05D005388 6.3e-22 109.4 188 48.4
CSS0022133 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 1.4e-21 108.2 221 45.7
CDE07G1645 Ceratophyllum demersum HOM05D004683 ORTHO05D005388 3.5e-20 103.6 271 35.8
COL.COLO4_30227 Corchorus olitorius HOM05D001156 ORTHO05D001006 2.0e-15 87.8 111 57.7
CSS0042721 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 3.7e-14 83.6 213 39.4
CSS0022243 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 4.8e-14 83.2 213 39.4
CSS0004114 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 1.8e-13 81.3 213 39.0
CSS0009085 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 1.8e-13 81.3 213 39.0
CSS0017523 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 5.3e-13 79.7 213 38.5
CSS0049827 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 7.0e-13 79.3 213 39.0
SMO351G0434 Selaginella moellendorffii HOM05D025386 ORTHO05D005388 1.6e-12 78.2 171 36.3
A09p40660 Brassica napus HOM05D004683 ORTHO05D005388 1.0e-11 75.5 71 66.2
Os05g0547100 Oryza sativa ssp. japonica HOM05D004683 ORTHO05D005388 3.2e-10 70.5 178 37.6
Sabra19G0093600 Salix brachista HOM05D000057 ORTHO05D005388 7.2e-10 69.3 101 49.5
CSS0019011 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 3.0e-08 63.9 214 36.4
Zm00001eb365900 Zea mays HOM05D004683 ORTHO05D005388 5.2e-08 63.2 143 36.4
AagrBONN_evm.TU.Sc2ySwM_117.2428 Anthoceros agrestis HOM05D025386 ORTHO05D026614 2.8e-06 57.4 126 34.9


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