Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.D01420 Eucalyptus grandis HOM05D000519 ORTHO05D000959 3.7e-58 228.0 116 100.0
Eucgr.D01422 Eucalyptus grandis HOM05D035512 ORTHO05D000959 3.4e-19 98.6 101 52.5
Eucgr.D01425 Eucalyptus grandis HOM05D035512 ORTHO05D000959 3.7e-18 95.1 101 50.5
Eucgr.D01426 Eucalyptus grandis HOM05D035512 ORTHO05D000959 2.4e-17 92.4 101 51.5
Cfa000088 Carpinus fangiana HOM05D000519 ORTHO05D000959 3.6e-13 78.6 112 42.0
Haze_09252 Corylus avellana HOM05D000519 ORTHO05D000959 5.2e-12 74.7 102 43.1
CiPaw.09G103500 Carya illinoinensis HOM05D000519 ORTHO05D000959 1.5e-11 73.2 111 37.8
Cfa019521 Carpinus fangiana HOM05D000519 ORTHO05D000959 3.4e-11 72.0 106 42.5
SHI24454 Sapria himalayana HOM05D000519 ORTHO05D000959 2.8e-10 68.9 94 41.5
DCAR_002225 Daucus carota HOM05D000519 ORTHO05D000959 3.7e-10 68.6 100 40.0
CARHR173800 Cardamine hirsuta HOM05D000519 ORTHO05D000959 6.3e-10 67.8 108 40.7
Ciclev10003705m.g Citrus clementina HOM05D000519 ORTHO05D000959 1.8e-09 66.2 82 36.6
HanXRQChr17g0544761 Helianthus annuus HOM05D000519 ORTHO05D000959 3.1e-09 65.5 110 42.7
THA.LOC104815487 Tarenaya hassleriana HOM05D000519 ORTHO05D000959 5.4e-09 64.7 99 35.4
TAR629G0911 Trochodendron aralioides HOM05D000519 ORTHO05D000959 7.0e-09 64.3 117 37.6
Aa31LG2G12570 Aethionema arabicum HOM05D000519 ORTHO05D019510 9.1e-09 63.9 105 37.1
Lalb_Chr20g0119301 Lupinus albus HOM05D000519 ORTHO05D000959 9.1e-09 63.9 100 36.0
RcHm_v2.0_Chr5g0001051 Rosa chinensis HOM05D000519 ORTHO05D000959 9.1e-09 63.9 82 43.9
Manes.09G039400 Manihot esculenta HOM05D000519 ORTHO05D000959 1.2e-08 63.5 88 39.8
AL8G10420 Arabidopsis lyrata HOM05D000519 ORTHO05D000959 1.6e-08 63.2 108 36.1
Ciclev10009506m.g Citrus clementina HOM05D000519 ORTHO05D000959 1.6e-08 63.2 112 35.7
MELO3C025557.2 Cucumis melo HOM05D000519 ORTHO05D000959 1.6e-08 63.2 106 40.6
QL05p069227 Quercus lobata HOM05D000519 ORTHO05D000959 1.6e-08 63.2 104 33.7
FAN25G1172 Fragaria x ananassa HOM05D000519 ORTHO05D000959 2.0e-08 62.8 83 41.0
Nn5g27758 Nelumbo nucifera HOM05D000519 ORTHO05D000959 2.0e-08 62.8 111 38.7
RcHm_v2.0_Chr1g0361291 Rosa chinensis HOM05D000519 ORTHO05D000959 2.0e-08 62.8 77 39.0
Sed0023459 Sechium edule HOM05D000519 ORTHO05D000959 2.0e-08 62.8 84 38.1
Thecc.03G313400 Theobroma cacao HOM05D000519 ORTHO05D000959 2.0e-08 62.8 106 33.0
Medtr4g133540 Medicago truncatula HOM05D000519 ORTHO05D000959 2.7e-08 62.4 114 34.2
DCAR_002223 Daucus carota HOM05D000519 ORTHO05D000959 3.5e-08 62.0 104 38.5
FvH4_3g08020 Fragaria vesca HOM05D000519 ORTHO05D000959 3.5e-08 62.0 84 40.5
FAN16G0731 Fragaria x ananassa HOM05D000519 ORTHO05D000959 3.5e-08 62.0 84 40.5
Hma1.2p1_0657F.1_g197050 Hydrangea macrophylla HOM05D000519 ORTHO05D000959 3.5e-08 62.0 109 37.6
Manes.08G041000 Manihot esculenta HOM05D000519 ORTHO05D000959 3.5e-08 62.0 98 34.7
Medtr4g017620 Medicago truncatula HOM05D000519 ORTHO05D000959 3.5e-08 62.0 102 35.3
QL05p069213 Quercus lobata HOM05D000519 ORTHO05D000959 3.5e-08 62.0 105 32.4
ClCG01G010410 Citrullus lanatus HOM05D000519 ORTHO05D000959 4.5e-08 61.6 101 38.6
Prupe.4G008900 Prunus persica HOM05D000519 ORTHO05D000959 4.5e-08 61.6 112 37.5
CsaV3_1G017140 Cucumis sativus L. HOM05D000519 ORTHO05D000959 5.9e-08 61.2 97 38.1
Duzib160G0143 Durio zibethinus HOM05D000519 ORTHO05D000959 5.9e-08 61.2 113 32.7
HanXRQChr04g0096511 Helianthus annuus HOM05D000519 ORTHO05D000959 5.9e-08 61.2 100 36.0
Aa31LG2G12610 Aethionema arabicum HOM05D000519 ORTHO05D000959 7.7e-08 60.8 102 32.4
AUR62021845 Chenopodium quinoa HOM05D000519 ORTHO05D000959 7.7e-08 60.8 108 34.3
ClCG01G010440 Citrullus lanatus HOM05D000519 ORTHO05D000959 7.7e-08 60.8 93 38.7
Nitab4.5_0001735g0110 Nicotiana tabacum HOM05D000519 ORTHO05D000959 7.7e-08 60.8 108 35.2
Psat4g004160 Pisum sativum HOM05D000519 ORTHO05D000959 7.7e-08 60.8 92 38.0
Ah.09g234140 Amaranthus hybridus HOM05D000519 ORTHO05D000959 1.0e-07 60.5 105 38.1
Eucgr.E03919 Eucalyptus grandis HOM05D000519 ORTHO05D000959 1.0e-07 60.5 111 32.4
AL4G28250 Arabidopsis lyrata HOM05D000519 ORTHO05D000959 1.3e-07 60.1 104 36.5
BcaB01g03103 Brassica carinata HOM05D000519 ORTHO05D000959 1.3e-07 60.1 112 35.7
Medtr2g103740 Medicago truncatula HOM05D000519 ORTHO05D000959 1.3e-07 60.1 110 38.2
TPR.G35897 Trifolium pratense HOM05D000519 ORTHO05D000959 1.3e-07 60.1 110 33.6
GSVIVG01003320001 Vitis vinifera HOM05D000519 ORTHO05D000959 1.3e-07 60.1 106 37.7
CANSAT56G2160 Cannabis sativa HOM05D000519 ORTHO05D000959 1.7e-07 59.7 110 29.1
MD05G1358700 Malus domestica HOM05D000519 ORTHO05D000959 1.7e-07 59.7 108 38.0
Sed0004852 Sechium edule HOM05D000519 ORTHO05D000959 1.7e-07 59.7 82 37.8
AT5G47550 Arabidopsis thaliana HOM05D000519 ORTHO05D000959 2.3e-07 59.3 108 34.3
Carub.0008s0023 Capsella rubella HOM05D000519 ORTHO05D000959 2.3e-07 59.3 82 37.8
Nn1g03277 Nelumbo nucifera HOM05D000519 ORTHO05D000959 2.3e-07 59.3 103 37.9
ClCG01G010520 Citrullus lanatus HOM05D000519 ORTHO05D000959 2.9e-07 58.9 94 38.3
ClCG01G010530 Citrullus lanatus HOM05D000519 ORTHO05D000959 2.9e-07 58.9 93 37.6
Lsat_1_v5_gn_1_114540 Lactuca sativa HOM05D000519 ORTHO05D000959 2.9e-07 58.9 110 34.5
Manes.03G153900 Manihot esculenta HOM05D000519 ORTHO05D000959 2.9e-07 58.9 98 32.7
RcHm_v2.0_Chr5g0010271 Rosa chinensis HOM05D000519 ORTHO05D000959 2.9e-07 58.9 83 41.0
Ca_21040_v3 Cicer arietinum L. HOM05D000519 ORTHO05D000959 3.8e-07 58.5 92 38.0
Thhalv10026611m.g Eutrema salsugineum HOM05D000519 ORTHO05D000959 3.8e-07 58.5 96 36.5
Nitab4.5_0004646g0100 Nicotiana tabacum HOM05D000519 ORTHO05D000959 3.8e-07 58.5 105 34.3
Aa31LG3G7150 Aethionema arabicum HOM05D000519 ORTHO05D000959 5.0e-07 58.2 111 35.1
Aa31LG3G7160 Aethionema arabicum HOM05D000519 ORTHO05D000959 5.0e-07 58.2 111 36.0
ECA248G0374 Erigeron canadensis HOM05D000519 ORTHO05D000959 5.0e-07 58.2 118 34.7
Nn3g21163 Nelumbo nucifera HOM05D000519 ORTHO05D000959 5.0e-07 58.2 113 35.4
Sp7g15050 Schrenkiella parvula HOM05D000519 ORTHO05D000959 5.0e-07 58.2 105 36.2
Nn3g21162 Nelumbo nucifera HOM05D000519 ORTHO05D000959 6.6e-07 57.8 113 35.4
Psat4g004120 Pisum sativum HOM05D000519 ORTHO05D000959 6.6e-07 57.8 96 38.5
TPR.G30458 Trifolium pratense HOM05D000519 ORTHO05D000959 6.6e-07 57.8 110 33.6
BcaNung00187 Brassica carinata HOM05D000519 ORTHO05D000959 8.6e-07 57.4 105 36.2
A02p31410 Brassica napus HOM05D000919 ORTHO05D001187 8.6e-07 57.4 83 38.6
AUR62012808 Chenopodium quinoa HOM05D000519 ORTHO05D000959 8.6e-07 57.4 108 32.4
ClCG01G010470 Citrullus lanatus HOM05D000519 ORTHO05D000959 8.6e-07 57.4 83 39.8
ClCG01G010490 Citrullus lanatus HOM05D000519 ORTHO05D000959 8.6e-07 57.4 93 36.6
Medtr2g026040 Medicago truncatula HOM05D000519 ORTHO05D000959 8.6e-07 57.4 99 40.4
Phvul.003G084300 Phaseolus vulgaris HOM05D000519 ORTHO05D000959 8.6e-07 57.4 112 33.9
Sp2g12280 Schrenkiella parvula HOM05D000519 ORTHO05D000959 8.6e-07 57.4 105 37.1
Thecc.06G234700 Theobroma cacao HOM05D000519 ORTHO05D000959 8.6e-07 57.4 108 33.3
BcaC06g31374 Brassica carinata HOM05D000519 ORTHO05D000959 1.1e-06 57.0 78 41.0
Gorai.010G187300 Gossypium raimondii HOM05D000519 ORTHO05D000959 1.1e-06 57.0 113 33.6
RcHm_v2.0_Chr3g0455001 Rosa chinensis HOM05D000519 ORTHO05D000959 1.1e-06 57.0 79 39.2
TWI63G0767 Tripterygium wilfordii HOM05D000519 ORTHO05D000959 1.1e-06 57.0 108 33.3
CARHR126700 Cardamine hirsuta HOM05D000519 ORTHO05D000959 1.5e-06 56.6 104 35.6
Cpa.g.sc75.103 Carica papaya HOM05D000519 ORTHO05D000959 1.5e-06 56.6 84 38.1
CsaV3_1G017120 Cucumis sativus L. HOM05D000519 ORTHO05D000959 1.5e-06 56.6 82 39.0
Gohir.D06G160600 Gossypium hirsutum HOM05D000519 ORTHO05D000959 1.5e-06 56.6 113 33.6
MD05G1358900 Malus domestica HOM05D000519 ORTHO05D000959 1.5e-06 56.6 84 38.1
TWI59G0838 Tripterygium wilfordii HOM05D000519 ORTHO05D000959 1.5e-06 56.6 111 32.4
Aa31sc265G20 Aethionema arabicum HOM05D000519 ORTHO05D000959 1.9e-06 56.2 116 31.0
Aqoxy1G04038 Aquilegia oxysepala HOM05D000519 ORTHO05D000959 1.9e-06 56.2 72 41.7
EL10Ac8g20214 Beta vulgaris HOM05D000519 ORTHO05D000959 1.9e-06 56.2 106 35.8
BcaB07g30638 Brassica carinata HOM05D000519 ORTHO05D000959 1.9e-06 56.2 110 32.7
Gohir.A06G153800 Gossypium hirsutum HOM05D000519 ORTHO05D000959 1.9e-06 56.2 113 31.0
Lalb_Chr18g0057041 Lupinus albus HOM05D000519 ORTHO05D000959 1.9e-06 56.2 108 37.0
MD10G1333500 Malus domestica HOM05D000519 ORTHO05D000959 1.9e-06 56.2 84 39.3
RcHm_v2.0_Chr5g0001151 Rosa chinensis HOM05D000519 ORTHO05D000959 1.9e-06 56.2 101 34.7
Ca_21039_v3 Cicer arietinum L. HOM05D000519 ORTHO05D000959 2.5e-06 55.8 114 29.8
MELO3C025554.2 Cucumis melo HOM05D000519 ORTHO05D000959 3.3e-06 55.5 113 31.0
HanXRQChr04g0096481 Helianthus annuus HOM05D000519 ORTHO05D000959 3.3e-06 55.5 90 35.6
Thhalv10001076m.g Eutrema salsugineum HOM05D000519 ORTHO05D000959 4.2e-06 55.1 98 35.7
BcaC03g16971 Brassica carinata HOM05D000519 ORTHO05D000959 5.5e-06 54.7 111 34.2
A09p23090 Brassica napus HOM05D000519 ORTHO05D000959 5.5e-06 54.7 96 39.6
BraA09t37913Z Brassica rapa HOM05D000519 ORTHO05D000959 5.5e-06 54.7 96 39.6
CsaV3_1G017110 Cucumis sativus L. HOM05D000519 ORTHO05D000959 5.5e-06 54.7 67 38.8
Duzib205G0308 Durio zibethinus HOM05D000519 ORTHO05D000959 5.5e-06 54.7 77 35.1
COL.COLO4_31900 Corchorus olitorius HOM05D000919 ORTHO05D001187 7.2e-06 54.3 95 29.5
Thhalv10017424m.g Eutrema salsugineum HOM05D000519 ORTHO05D000959 7.2e-06 54.3 118 33.9
Gohir.D06G160700 Gossypium hirsutum HOM05D000519 ORTHO05D000959 7.2e-06 54.3 117 33.3
Lalb_Chr18g0057031 Lupinus albus HOM05D000519 ORTHO05D000959 7.2e-06 54.3 55 45.5
Nitab4.5_0001109g0080 Nicotiana tabacum HOM05D000519 ORTHO05D000959 7.2e-06 54.3 107 33.6
Sed0006916 Sechium edule HOM05D000519 ORTHO05D000959 7.2e-06 54.3 100 40.0
VMungo1215G1198 Vigna mungo HOM05D000519 ORTHO05D000959 7.2e-06 54.3 111 30.6
BcaC04g21616 Brassica carinata HOM05D000519 ORTHO05D000959 9.5e-06 53.9 92 39.1
C09p29840 Brassica napus HOM05D000519 ORTHO05D000959 9.5e-06 53.9 92 39.1
BolC9t55847H Brassica oleracea HOM05D000519 ORTHO05D000959 9.5e-06 53.9 92 39.1
Haze_06945 Corylus avellana HOM05D000519 ORTHO05D000959 9.5e-06 53.9 78 39.7
HanXRQChr04g0096521 Helianthus annuus HOM05D000519 ORTHO05D000959 9.5e-06 53.9 81 34.6
Nitab4.5_0005135g0030 Nicotiana tabacum HOM05D000519 ORTHO05D000959 9.5e-06 53.9 78 38.5


User provided reference genes

Program Settings