Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.D01372 Eucalyptus grandis HOM05D000141 ORTHO05D191038 1.4e-67 259.6 142 100.0
Eucgr.I00545 Eucalyptus grandis HOM05D000141 ORTHO05D004993 1.6e-39 166.4 113 87.6
CiPaw.07G048100 Carya illinoinensis HOM05D000141 ORTHO05D004993 5.5e-32 141.4 109 70.6
PGR031G3531 Punica granatum HOM05D000141 ORTHO05D004993 2.1e-31 139.4 109 69.7
QL06p035637 Quercus lobata HOM05D000141 ORTHO05D004993 2.7e-31 139.0 109 69.7
Haze_03862 Corylus avellana HOM05D000141 ORTHO05D004993 6.1e-31 137.9 109 68.8
Rhsim10G0172400 Rhododendron simsii HOM05D000141 ORTHO05D004993 6.1e-31 137.9 125 60.0
Cfa006890 Carpinus fangiana HOM05D000141 ORTHO05D004993 1.8e-30 136.3 109 67.9
vmacro13004 Vaccinium macrocarpon HOM05D000141 ORTHO05D004993 1.8e-30 136.3 113 64.6
Thecc.01G091400 Theobroma cacao HOM05D000141 ORTHO05D004993 4.0e-30 135.2 109 67.9
Gorai.007G233100 Gossypium raimondii HOM05D000141 ORTHO05D004993 8.8e-30 134.0 116 64.7
Manes.12G126900 Manihot esculenta HOM05D000141 ORTHO05D004993 8.8e-30 134.0 129 59.7
Gohir.A11G206600 Gossypium hirsutum HOM05D000141 ORTHO05D004993 1.2e-29 133.7 109 66.1
COL.COLO4_27349 Corchorus olitorius HOM05D000141 ORTHO05D004993 1.5e-29 133.3 109 67.0
Duzib147G0545 Durio zibethinus HOM05D000141 ORTHO05D004993 1.5e-29 133.3 109 67.0
Gohir.D11G217000 Gossypium hirsutum HOM05D000141 ORTHO05D004993 2.0e-29 132.9 116 63.8
TPR.G14602 Trifolium pratense HOM05D000141 ORTHO05D004993 3.3e-29 132.1 109 66.1
CANSAT54G0158 Cannabis sativa HOM05D000141 ORTHO05D004993 4.4e-29 131.7 109 66.1
Atru.chr3.1257 Acer truncatum HOM05D000141 ORTHO05D004993 7.5e-29 131.0 109 66.1
Lj4g0027101 Lotus japonicus HOM05D000141 ORTHO05D004993 7.5e-29 131.0 109 66.1
Phvul.003G289200 Phaseolus vulgaris HOM05D000141 ORTHO05D004993 7.5e-29 131.0 109 65.1
Dinv36921 Davidia involucrata HOM05D000141 ORTHO05D004993 1.7e-28 129.8 109 65.1
Lalb_Chr05g0216301 Lupinus albus HOM05D000141 ORTHO05D004993 1.7e-28 129.8 109 67.0
Potri.007G010700 Populus trichocarpa HOM05D000141 ORTHO05D004993 1.7e-28 129.8 121 61.2
GSVIVG01005935001 Vitis vinifera HOM05D000141 ORTHO05D004993 1.7e-28 129.8 109 65.1
Prupe.6G198800 Prunus persica HOM05D000141 ORTHO05D004993 2.2e-28 129.4 109 66.1
Glyma.08G279800 Glycine max HOM05D000141 ORTHO05D004993 3.7e-28 128.6 118 61.0
CARHR202820 Cardamine hirsuta HOM05D000141 ORTHO05D004993 4.8e-28 128.3 133 58.6
Thhalv10012459m.g Eutrema salsugineum HOM05D000141 ORTHO05D004993 4.8e-28 128.3 133 57.9
Aa31LG3G16690 Aethionema arabicum HOM05D000141 ORTHO05D004993 6.3e-28 127.9 128 59.4
AL6G20990 Arabidopsis lyrata HOM05D000141 ORTHO05D004993 6.3e-28 127.9 128 58.6
MD15G1313400 Malus domestica HOM05D000141 ORTHO05D004993 6.3e-28 127.9 111 64.0
Hund14088 Selenicereus undatus HOM05D000141 ORTHO05D004993 6.3e-28 127.9 112 61.6
CSS0025143 Camellia sinensis var. sinensis HOM05D000141 ORTHO05D004993 8.2e-28 127.5 109 63.3
ClCG01G018390 Citrullus lanatus HOM05D000141 ORTHO05D004993 1.4e-27 126.7 109 62.4
Ciclev10024724m.g Citrus clementina HOM05D000141 ORTHO05D004993 1.4e-27 126.7 111 60.4
Medtr8g471180 Medicago truncatula HOM05D000141 ORTHO05D004993 1.4e-27 126.7 108 64.8
Sp6g32970 Schrenkiella parvula HOM05D000141 ORTHO05D004993 1.4e-27 126.7 128 57.0
Aqoxy6G01438 Aquilegia oxysepala HOM05D000141 ORTHO05D004993 1.8e-27 126.3 123 56.9
Lj2C535G3 Lonicera japonica HOM05D000141 ORTHO05D004993 1.8e-27 126.3 113 61.9
THA.LOC104819293 Tarenaya hassleriana HOM05D000141 ORTHO05D004993 1.8e-27 126.3 122 59.0
Ca_22599_v3 Cicer arietinum L. HOM05D000141 ORTHO05D004993 2.4e-27 125.9 109 64.2
TWI77G1015 Tripterygium wilfordii HOM05D000141 ORTHO05D004993 2.4e-27 125.9 109 63.3
Glyma.18G146600 Glycine max HOM05D000141 ORTHO05D004993 3.1e-27 125.6 122 60.7
MD00G1019700 Malus domestica HOM05D000141 ORTHO05D004993 3.1e-27 125.6 116 59.5
Peaxi162Scf00778g00009 Petunia axillaris HOM05D000141 ORTHO05D004993 3.1e-27 125.6 118 60.2
Sabra07G0008100 Salix brachista HOM05D000141 ORTHO05D004993 3.1e-27 125.6 112 62.5
TAR376G1001 Trochodendron aralioides HOM05D000141 ORTHO05D004993 4.1e-27 125.2 115 60.9
MELO3C007717.2 Cucumis melo HOM05D000141 ORTHO05D004993 5.3e-27 124.8 109 61.5
CsaV3_6G045040 Cucumis sativus L. HOM05D000141 ORTHO05D004993 5.3e-27 124.8 109 60.6
Cpa.g.sc55.32 Carica papaya HOM05D000141 ORTHO05D004993 7.0e-27 124.4 112 61.6
TWI74G0717 Tripterygium wilfordii HOM05D000141 ORTHO05D004993 7.0e-27 124.4 109 64.2
BraA03t09798Z Brassica rapa HOM05D000141 ORTHO05D004993 9.1e-27 124.0 110 62.7
FvH4_1g19720 Fragaria vesca HOM05D000141 ORTHO05D004993 9.1e-27 124.0 106 66.0
FAN19G2112 Fragaria x ananassa HOM05D000141 ORTHO05D004993 9.1e-27 124.0 106 66.0
Sed0001145 Sechium edule HOM05D000141 ORTHO05D004993 9.1e-27 124.0 112 60.7
Carub.0006s0895 Capsella rubella HOM05D000141 ORTHO05D004993 1.2e-26 123.6 110 62.7
Lalb_Chr05g0228501 Lupinus albus HOM05D000141 ORTHO05D004993 1.2e-26 123.6 108 62.0
MBI02_g32604_MAGBIO Magnolia biondii HOM05D000141 ORTHO05D004993 1.6e-26 123.2 110 60.0
AT5G65460 Arabidopsis thaliana HOM05D000141 ORTHO05D004993 2.0e-26 122.9 126 54.8
Sopen11g005360 Solanum pennellii HOM05D000141 ORTHO05D004993 2.7e-26 122.5 109 58.7
Actinidia25312 Actinidia chinensis HOM05D000141 ORTHO05D004993 3.5e-26 122.1 109 60.6
AL8G43040 Arabidopsis lyrata HOM05D000141 ORTHO05D004993 3.5e-26 122.1 118 57.6
AT5G10470 Arabidopsis thaliana HOM05D000141 ORTHO05D004993 3.5e-26 122.1 128 54.7
FAN28G0107 Fragaria x ananassa HOM05D000141 ORTHO05D004993 3.5e-26 122.1 106 64.2
PSO675G5554 Papaver somniferum HOM05D000141 ORTHO05D004993 3.5e-26 122.1 112 58.0
BcaB01g05532 Brassica carinata HOM05D000141 ORTHO05D004993 4.5e-26 121.7 110 61.8
BcaB01g06283 Brassica carinata HOM05D000141 ORTHO05D004993 4.5e-26 121.7 110 60.9
A03p04560 Brassica napus HOM05D000141 ORTHO05D004993 4.5e-26 121.7 110 61.8
C03p05120 Brassica napus HOM05D000141 ORTHO05D004993 4.5e-26 121.7 110 61.8
Thhalv10003525m.g Eutrema salsugineum HOM05D000141 ORTHO05D004993 1.0e-25 120.6 126 53.2
Sc16g0000540 Simmondsia chinensis HOM05D006593 ORTHO05D004993 1.0e-25 120.6 109 56.9
FAN26G1575 Fragaria x ananassa HOM05D000141 ORTHO05D004993 1.3e-25 120.2 106 63.2
Lsat_1_v5_gn_3_61481 Lactuca sativa HOM05D000141 ORTHO05D004993 1.3e-25 120.2 113 56.6
RcHm_v2.0_Chr2g0111301 Rosa chinensis HOM05D000141 ORTHO05D004993 1.3e-25 120.2 106 63.2
Oeu012465.2 Olea europaea HOM05D000141 ORTHO05D004993 5.0e-25 118.2 109 56.9
Sp2g28540 Schrenkiella parvula HOM05D000141 ORTHO05D004993 8.5e-25 117.5 89 68.5
Aa31LG1G16550 Aethionema arabicum HOM05D000141 ORTHO05D004993 1.5e-24 116.7 119 56.3
Glyma.01G023600 Glycine max HOM05D000141 ORTHO05D004993 1.9e-24 116.3 109 61.5
EL10Ac6g15211 Beta vulgaris HOM05D000141 ORTHO05D004993 4.2e-24 115.2 109 55.0
A06p32290 Brassica napus HOM05D000141 ORTHO05D004993 1.2e-23 113.6 89 66.3
Glyma.02G041400 Glycine max HOM05D000141 ORTHO05D004993 1.2e-23 113.6 109 59.6
Carub.0008s2631 Capsella rubella HOM05D000141 ORTHO05D004993 1.6e-23 113.2 89 65.2
SalBow5G1291 Salvia bowleyana HOM05D000141 ORTHO05D004993 2.1e-23 112.8 106 60.4
BraA06t26155Z Brassica rapa HOM05D000141 ORTHO05D004993 2.7e-23 112.5 89 65.2
AUR62003657 Chenopodium quinoa HOM05D000141 ORTHO05D004993 3.6e-23 112.1 111 55.0
BolC3t18317H Brassica oleracea HOM05D000141 ORTHO05D004993 4.7e-23 111.7 85 67.1
CARHR279440 Cardamine hirsuta HOM05D000141 ORTHO05D004993 6.1e-23 111.3 108 57.4
MSTRG.15690 Avicennia marina HOM05D000141 ORTHO05D004993 8.0e-23 110.9 118 55.1
C03p60620 Brassica napus HOM05D000141 ORTHO05D004993 8.0e-23 110.9 85 67.1
Phvul.002G147700 Phaseolus vulgaris HOM05D000141 ORTHO05D004993 8.0e-23 110.9 83 68.7
SGA_v2.0_scaffold45G17236 Striga asiatica HOM05D000141 ORTHO05D004993 1.4e-22 110.2 114 54.4
ECA246G1560 Erigeron canadensis HOM05D006593 ORTHO05D004993 3.0e-22 109.0 112 53.6
Nitab4.5_0001468g0110 Nicotiana tabacum HOM05D000141 ORTHO05D004993 4.0e-22 108.6 149 45.0
Zm00001eb372980 Zea mays HOM05D000141 ORTHO05D004993 4.0e-22 108.6 85 64.7
Psat4g117240 Pisum sativum HOM05D000141 ORTHO05D004993 5.2e-22 108.2 71 77.5
Eucgr.L01735 Eucalyptus grandis HOM05D000141 ORTHO05D004993 1.2e-21 107.1 166 47.0
arahy.Tifrunner.gnm1.ann1.029WE6 Arachis hypogaea HOM05D000141 ORTHO05D004993 1.5e-21 106.7 154 44.8
CDE10G0963 Ceratophyllum demersum HOM05D000141 ORTHO05D004993 2.0e-21 106.3 109 52.3
Migut.K00793 Erythranthe guttata HOM05D000141 ORTHO05D004993 2.0e-21 106.3 118 50.8
SEGI_29645 Sequoiadendron giganteum HOM05D000141 ORTHO05D004993 2.6e-21 105.9 92 63.0
Nitab4.5_0004153g0030 Nicotiana tabacum HOM05D000141 ORTHO05D004993 3.4e-21 105.5 113 54.0
Pp3c3_10920 Physcomitrium patens HOM05D000141 ORTHO05D004993 2.2e-20 102.8 106 50.0
Pp3c3_10921 Physcomitrium patens HOM05D000141 ORTHO05D004993 2.2e-20 102.8 106 50.0
SMO169G0019 Selaginella moellendorffii HOM05D000141 ORTHO05D004993 2.2e-20 102.8 112 55.4
PSO541G3987 Papaver somniferum HOM05D000141 ORTHO05D004993 3.7e-20 102.1 115 54.8
VMungo1215G2324 Vigna mungo HOM05D000141 ORTHO05D004993 3.7e-20 102.1 71 73.2
Pp3c4_24010 Physcomitrium patens HOM05D000141 ORTHO05D004993 4.8e-20 101.7 106 50.0
HPP92_005964 Vanilla planifolia HOM05D000141 ORTHO05D004993 1.4e-19 100.1 121 46.3
AagrBONN_evm.TU.Sc2ySwM_228.4409 Anthoceros agrestis HOM05D000141 ORTHO05D004993 1.8e-19 99.8 107 51.4
Solyc11g010560.3 Solanum lycopersicum HOM05D000141 ORTHO05D004993 2.4e-19 99.4 72 65.3
unitig_0.g1717 Utricularia gibba HOM05D000141 ORTHO05D004993 7.0e-19 97.8 109 49.5
unitig_748.g7037 Utricularia gibba HOM05D000141 ORTHO05D004993 1.2e-18 97.1 118 48.3
arahy.Tifrunner.gnm1.ann1.5SKZ26 Arachis hypogaea HOM05D000141 ORTHO05D004993 2.0e-18 96.3 89 59.6
Ah.03g140120 Amaranthus hybridus HOM05D000141 ORTHO05D004993 5.0e-17 91.7 71 60.6
DCAR_003449 Daucus carota HOM05D000141 ORTHO05D004993 6.5e-17 91.3 109 46.8
Mapoly0022s0156 Marchantia polymorpha HOM05D000141 ORTHO05D004993 6.5e-17 91.3 83 56.6
CAN.G1344.2 Capsicum annuum HOM05D000141 ORTHO05D004993 1.1e-16 90.5 85 55.3
DCAR_016619 Daucus carota HOM05D000141 ORTHO05D004993 1.5e-16 90.1 78 61.5
TAR628G0162 Trochodendron aralioides HOM05D000141 ORTHO05D004993 1.9e-16 89.7 104 52.9
HanXRQChr13g0405071 Helianthus annuus HOM05D000141 ORTHO05D004993 2.5e-16 89.4 112 47.3
arahy.Tifrunner.gnm1.ann1.52WN7P Arachis hypogaea HOM05D000141 ORTHO05D004993 3.3e-16 89.0 101 53.5
CBR_g78819 Chara braunii HOM05D000141 ORTHO05D004993 9.5e-16 87.4 78 57.7
AUR62017965 Chenopodium quinoa HOM05D000141 ORTHO05D004993 3.1e-11 72.4 120 41.7
CDE10G1258 Ceratophyllum demersum HOM05D000141 ORTHO05D004993 1.7e-09 66.6 106 39.6
SMO337G0058 Selaginella moellendorffii HOM05D000141 ORTHO05D004993 2.3e-09 66.2 83 47.0
MELO3C032683.2 Cucumis melo HOM05D004656 ORTHO05D005404 5.0e-09 65.1 48 68.8


User provided reference genes

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