Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.D01304 Eucalyptus grandis HOM05D005739 ORTHO05D007740 3.0e-207 724.9 370 100.0
TWI38G1065 Tripterygium wilfordii HOM05D005739 ORTHO05D007740 6.7e-146 521.2 355 71.5
Ciclev10015698m.g Citrus clementina HOM05D005739 ORTHO05D007740 7.4e-145 517.7 361 68.4
Cfa000251 Carpinus fangiana HOM05D005739 ORTHO05D007740 3.1e-143 512.3 361 70.1
Potri.011G000100 Populus trichocarpa HOM05D005739 ORTHO05D007740 2.0e-142 509.6 362 69.9
Atru.chr10.2176 Acer truncatum HOM05D005739 ORTHO05D007740 2.6e-142 509.2 370 67.8
COL.COLO4_31742 Corchorus olitorius HOM05D005739 ORTHO05D007740 2.6e-142 509.2 361 69.5
Thecc.06G217300 Theobroma cacao HOM05D005739 ORTHO05D007740 2.6e-142 509.2 361 70.6
QL05p074082 Quercus lobata HOM05D005739 ORTHO05D007740 3.4e-142 508.8 354 70.9
MELO3C007380.2 Cucumis melo HOM05D005739 ORTHO05D007740 2.9e-141 505.8 356 69.4
CsaV3_6G049150 Cucumis sativus L. HOM05D005739 ORTHO05D007740 5.0e-141 505.0 356 69.1
AT4G04880 Arabidopsis thaliana HOM05D005739 ORTHO05D007740 1.1e-140 503.8 357 69.7
arahy.Tifrunner.gnm1.ann1.GPHX1M Arachis hypogaea HOM05D005739 ORTHO05D007740 1.4e-140 503.4 363 68.6
Sabra11G0000600 Salix brachista HOM05D005739 ORTHO05D007740 2.5e-140 502.7 362 69.3
arahy.Tifrunner.gnm1.ann1.HAY2RB Arachis hypogaea HOM05D005739 ORTHO05D007740 5.5e-140 501.5 363 68.3
Sed0020639 Sechium edule HOM05D005739 ORTHO05D007740 5.5e-140 501.5 362 68.5
AL6G48370 Arabidopsis lyrata HOM05D005739 ORTHO05D007740 1.2e-139 500.4 357 69.2
Carub.0006s3279 Capsella rubella HOM05D005739 ORTHO05D007740 1.2e-139 500.4 357 68.1
Actinidia11847 Actinidia chinensis HOM05D005739 ORTHO05D007740 1.6e-139 500.0 361 68.7
Nn1g03584 Nelumbo nucifera HOM05D005739 ORTHO05D007740 2.7e-139 499.2 361 69.0
CSS0045804 Camellia sinensis var. sinensis HOM05D005739 ORTHO05D007740 3.5e-139 498.8 361 68.7
Dinv13869 Davidia involucrata HOM05D005739 ORTHO05D007740 3.5e-139 498.8 354 70.3
Hma1.2p1_0813F.1_g222580 Hydrangea macrophylla HOM05D005739 ORTHO05D007740 3.5e-139 498.8 357 69.5
PGR004G1404 Punica granatum HOM05D005739 ORTHO05D007740 6.1e-139 498.0 361 68.1
Gohir.D06G153000 Gossypium hirsutum HOM05D005739 ORTHO05D007740 7.9e-139 497.7 362 68.0
Gorai.010G179000 Gossypium raimondii HOM05D005739 ORTHO05D007740 7.9e-139 497.7 362 68.0
VMungo1215G0361 Vigna mungo HOM05D005739 ORTHO05D007740 1.8e-138 496.5 365 67.9
TAR627G1089 Trochodendron aralioides HOM05D005739 ORTHO05D007740 2.3e-138 496.1 362 68.0
GSVIVG01012654001 Vitis vinifera HOM05D005739 ORTHO05D007740 3.9e-138 495.4 361 68.7
MD10G1317700 Malus domestica HOM05D005739 ORTHO05D007740 5.1e-138 495.0 361 68.4
Duzib235G0413 Durio zibethinus HOM05D005739 ORTHO05D007740 1.9e-137 493.0 361 67.6
Glyma.07G258900 Glycine max HOM05D005739 ORTHO05D007740 1.9e-137 493.0 364 67.6
A09p26050 Brassica napus HOM05D005739 ORTHO05D007740 4.3e-137 491.9 357 68.1
Haze_06773 Corylus avellana HOM05D005739 ORTHO05D007740 5.7e-137 491.5 323 74.6
HanXRQChr16g0515931 Helianthus annuus HOM05D005739 ORTHO05D007740 5.7e-137 491.5 359 68.0
Sp6g04100 Schrenkiella parvula HOM05D005739 ORTHO05D007740 5.7e-137 491.5 357 68.1
DCAR_008137 Daucus carota HOM05D005739 ORTHO05D007740 7.4e-137 491.1 361 68.4
Phvul.003G077000 Phaseolus vulgaris HOM05D005739 ORTHO05D007740 7.4e-137 491.1 364 67.0
RcHm_v2.0_Chr5g0003721 Rosa chinensis HOM05D005739 ORTHO05D007740 9.7e-137 490.7 361 68.1
PGSC0003DMG400011257 Solanum tuberosum HOM05D005739 ORTHO05D007740 9.7e-137 490.7 357 68.1
TPR.G37091 Trifolium pratense HOM05D005739 ORTHO05D007740 1.3e-136 490.3 363 66.1
Psat4g007680 Pisum sativum HOM05D005739 ORTHO05D007740 3.7e-136 488.8 358 66.5
BcaC04g21334 Brassica carinata HOM05D005739 ORTHO05D007740 4.8e-136 488.4 357 67.2
BolC9t56140H Brassica oleracea HOM05D005739 ORTHO05D007740 4.8e-136 488.4 357 67.2
BraA09t38171Z Brassica rapa HOM05D005739 ORTHO05D007740 4.8e-136 488.4 357 67.5
CARHR252690 Cardamine hirsuta HOM05D005739 ORTHO05D007740 1.1e-135 487.3 357 67.2
Solyc10g005310.3 Solanum lycopersicum HOM05D005739 ORTHO05D007740 1.4e-135 486.9 357 68.1
EL10Ac8g20019 Beta vulgaris HOM05D005739 ORTHO05D007740 2.4e-135 486.1 354 66.9
Ca_21095_v3 Cicer arietinum L. HOM05D005739 ORTHO05D007740 2.4e-135 486.1 359 66.3
Ca_30203_v3 Cicer arietinum L. HOM05D005739 ORTHO05D007740 2.4e-135 486.1 359 66.3
Thhalv10028765m.g Eutrema salsugineum HOM05D005739 ORTHO05D007740 5.3e-135 485.0 358 67.6
Glyma.15G106200 Glycine max HOM05D005739 ORTHO05D007740 6.9e-135 484.6 367 64.0
Aa31LG9G9620 Aethionema arabicum HOM05D005739 ORTHO05D007740 2.0e-134 483.0 381 64.3
Peaxi162Scf00203g01110 Petunia axillaris HOM05D005739 ORTHO05D007740 3.4e-134 482.3 354 67.5
Sed0022137 Sechium edule HOM05D005739 ORTHO05D007740 1.7e-133 479.9 349 68.2
ClCG01G022090 Citrullus lanatus HOM05D005739 ORTHO05D007740 2.2e-133 479.6 356 67.7
Migut.M01296 Erythranthe guttata HOM05D005739 ORTHO05D007740 2.2e-133 479.6 361 64.8
Lsat_1_v5_gn_4_60101 Lactuca sativa HOM05D005739 ORTHO05D007740 5.0e-133 478.4 342 68.4
SalBow8G1417 Salvia bowleyana HOM05D005739 ORTHO05D007740 6.5e-133 478.0 362 65.2
Lalb_Chr20g0118561 Lupinus albus HOM05D005739 ORTHO05D007740 1.1e-132 477.2 359 66.9
Glyma.13G206500 Glycine max HOM05D005739 ORTHO05D007740 1.9e-132 476.5 367 61.9
FvH4_3g02490 Fragaria vesca HOM05D005739 ORTHO05D007740 3.2e-132 475.7 361 65.1
Lj6g0027190 Lotus japonicus HOM05D005739 ORTHO05D007740 4.2e-132 475.3 358 66.2
BcaB01g01842 Brassica carinata HOM05D005739 ORTHO05D007740 5.5e-132 474.9 357 65.8
Nitab4.5_0007448g0040 Nicotiana tabacum HOM05D005739 ORTHO05D007740 7.2e-132 474.6 348 68.7
Rhsim02G0110500 Rhododendron simsii HOM05D005739 ORTHO05D007740 7.2e-132 474.6 378 63.8
VMungo0540G2038 Vigna mungo HOM05D005739 ORTHO05D007740 9.4e-132 474.2 356 65.7
ATR0752G010 Amborella trichopoda HOM05D005739 ORTHO05D007740 3.6e-131 472.2 362 63.8
vmacro15817 Vaccinium macrocarpon HOM05D005739 ORTHO05D007740 1.0e-130 470.7 378 63.0
Cc09_g01940 Coffea canephora HOM05D005739 ORTHO05D007740 1.4e-130 470.3 357 65.3
ECA234G0122 Erigeron canadensis HOM05D005739 ORTHO05D007740 2.3e-130 469.5 358 65.9
MSTRG.15974 Avicennia marina HOM05D005739 ORTHO05D007740 5.1e-130 468.4 356 64.6
C09p33050 Brassica napus HOM05D005739 ORTHO05D007740 6.7e-130 468.0 332 69.0
FAN25G0806 Fragaria x ananassa HOM05D005739 ORTHO05D007740 3.3e-129 465.7 363 63.9
PSO832G4144 Papaver somniferum HOM05D005739 ORTHO05D007740 1.7e-128 463.4 358 63.7
CDE11G0579 Ceratophyllum demersum HOM05D005739 ORTHO05D007740 2.8e-128 462.6 360 64.4
Oeu063902.1 Olea europaea HOM05D005739 ORTHO05D007740 2.8e-128 462.6 361 64.3
Phvul.006G151100 Phaseolus vulgaris HOM05D005739 ORTHO05D007740 8.2e-128 461.1 364 62.6
Psat1g181440 Pisum sativum HOM05D005739 ORTHO05D007740 8.2e-128 461.1 357 63.9
Cpa.g.sc198.24 Carica papaya HOM05D005739 ORTHO05D007740 4.1e-127 458.8 340 69.1
Lj1C1227G9 Lonicera japonica HOM05D005739 ORTHO05D007740 4.1e-127 458.8 362 65.5
THA.LOC104812968 Tarenaya hassleriana HOM05D005739 ORTHO05D007740 1.5e-126 456.8 338 66.3
Gohir.A06G147200 Gossypium hirsutum HOM05D005739 ORTHO05D007740 3.4e-126 455.7 341 66.9
PSO210G3635 Papaver somniferum HOM05D005739 ORTHO05D007740 3.4e-126 455.7 358 62.8
Ca_00625_v3 Cicer arietinum L. HOM05D005739 ORTHO05D007740 3.8e-125 452.2 357 63.9
SGA_v2.0_scaffold4G01929 Striga asiatica HOM05D005739 ORTHO05D007740 1.1e-124 450.7 370 63.2
TPR.G7643 Trifolium pratense HOM05D005739 ORTHO05D007740 5.5e-124 448.4 357 62.7
Ah.14g088100 Amaranthus hybridus HOM05D005739 ORTHO05D007740 3.6e-123 445.7 437 54.7
Medtr2g022780 Medicago truncatula HOM05D005739 ORTHO05D007740 4.7e-123 445.3 356 62.6
Zm00001eb110820 Zea mays HOM05D005739 ORTHO05D007740 7.9e-123 444.5 366 58.2
HPP92_016316 Vanilla planifolia HOM05D005739 ORTHO05D007740 3.0e-122 442.6 358 60.9
AUR62012674 Chenopodium quinoa HOM05D005739 ORTHO05D007740 6.7e-122 441.4 365 61.1
Os07g0661000 Oryza sativa ssp. japonica HOM05D005739 ORTHO05D007740 2.6e-121 439.5 365 58.1
SEGI_12484 Sequoiadendron giganteum HOM05D005739 ORTHO05D007740 4.4e-121 438.7 359 59.9
Medtr4g131840 Medicago truncatula HOM05D005739 ORTHO05D007740 7.4e-121 438.0 333 64.6
CiPaw.10G069300 Carya illinoinensis HOM05D005739 ORTHO05D007740 8.2e-120 434.5 287 73.9
Manes.16G010200 Manihot esculenta HOM05D005739 ORTHO05D007740 2.4e-119 433.0 312 68.3
Nitab4.5_0002155g0060 Nicotiana tabacum HOM05D005739 ORTHO05D007740 7.7e-118 427.9 397 58.2
CANSAT56G1696 Cannabis sativa HOM05D005739 ORTHO05D007740 2.3e-114 416.4 295 70.8
AUR62021982 Chenopodium quinoa HOM05D005739 ORTHO05D007740 3.0e-114 416.0 416 53.1
MBI18_g35070_MAGBIO Magnolia biondii HOM05D005739 ORTHO05D007740 4.4e-113 412.1 312 64.4
Sc06g0010750 Simmondsia chinensis HOM05D005739 ORTHO05D007740 1.0e-106 391.0 288 67.0
Prupe.4G024100 Prunus persica HOM05D005739 ORTHO05D007740 2.3e-106 389.8 275 70.5
unitig_92.g28118 Utricularia gibba HOM05D005739 ORTHO05D007740 2.0e-105 386.7 314 61.5
Dinv17816 Davidia involucrata HOM05D005739 ORTHO05D007740 4.4e-105 385.6 274 69.3
SMO343G0036 Selaginella moellendorffii HOM05D005739 ORTHO05D007740 2.2e-101 373.2 358 55.0
Dinv20033 Davidia involucrata HOM05D005739 ORTHO05D007740 5.0e-101 372.1 311 63.0
HPP92_016297 Vanilla planifolia HOM05D005739 ORTHO05D007740 5.0e-101 372.1 358 54.5
Hund23487 Selenicereus undatus HOM05D005739 ORTHO05D007740 3.1e-95 352.8 336 57.4
Mapoly0023s0135 Marchantia polymorpha HOM05D005739 ORTHO05D007740 2.0e-94 350.1 357 50.1
Aqoxy1G03635 Aquilegia oxysepala HOM05D005739 ORTHO05D007740 2.8e-91 339.7 268 64.2
Sopen10g001300 Solanum pennellii HOM05D005739 ORTHO05D007740 6.4e-88 328.6 251 64.5
CAN.G105.13 Capsicum annuum HOM05D005739 ORTHO05D007740 1.1e-87 327.8 258 64.0
AagrBONN_evm.TU.Sc2ySwM_368.535 Anthoceros agrestis HOM05D005739 ORTHO05D007740 5.2e-82 308.9 356 47.8
Pp3c11_7970 Physcomitrium patens HOM05D005739 ORTHO05D007740 4.6e-78 295.8 312 50.3
Cre03.g161000 Chlamydomonas reinhardtii HOM05D005739 ORTHO05D007740 2.1e-70 270.4 451 36.8
arahy.Tifrunner.gnm1.ann1.H0U1UD Arachis hypogaea HOM05D005739 ORTHO05D007740 5.1e-61 239.2 356 43.0
MCO11G903 Micromonas commoda HOM05D005739 ORTHO05D007740 8.1e-59 231.9 358 40.8
arahy.Tifrunner.gnm1.ann1.53BRPK Arachis hypogaea HOM05D005739 ORTHO05D007740 4.6e-54 216.1 175 64.6
arahy.Tifrunner.gnm1.ann1.FSQL8E Arachis hypogaea HOM05D005739 ORTHO05D007740 1.0e-53 214.9 271 48.7
arahy.Tifrunner.gnm1.ann1.KZ0328 Arachis hypogaea HOM05D005739 ORTHO05D007740 9.0e-50 201.8 240 50.8
arahy.Tifrunner.gnm1.ann1.Q9UH73 Arachis hypogaea HOM05D005739 ORTHO05D007740 6.4e-48 195.7 270 43.0
arahy.Tifrunner.gnm1.ann1.7V36PE Arachis hypogaea HOM05D005739 ORTHO05D007740 2.4e-47 193.7 214 53.3
arahy.Tifrunner.gnm1.ann1.0E5R4V Arachis hypogaea HOM05D005739 ORTHO05D007740 5.1e-45 186.0 180 58.3
arahy.Tifrunner.gnm1.ann1.B9PES8 Arachis hypogaea HOM05D005739 ORTHO05D007740 1.5e-44 184.5 180 57.8
arahy.Tifrunner.gnm1.ann1.AD56MI Arachis hypogaea HOM05D005739 ORTHO05D083983 9.0e-42 175.3 244 46.3
CANSAT64G1767 Cannabis sativa HOM05D005739 ORTHO05D033954 1.2e-30 138.3 111 58.6
arahy.Tifrunner.gnm1.ann1.39644B Arachis hypogaea HOM05D005739 ORTHO05D007740 1.5e-20 104.8 204 37.3
CANSAT56G0563 Cannabis sativa HOM05D005739 ORTHO05D113818 1.6e-19 101.3 105 50.5
SEGI_28449 Sequoiadendron giganteum HOM05D005739 ORTHO05D033954 1.4e-13 81.6 71 50.7
arahy.Tifrunner.gnm1.ann1.3ZZ8UM Arachis hypogaea HOM05D000187 ORTHO05D000230 1.5e-12 78.2 49 73.5
Ca_29425_v3 Cicer arietinum L. HOM05D005739 ORTHO05D044167 2.0e-12 77.8 205 30.2
RcHm_v2.0_Chr5g0051251 Rosa chinensis HOM05D005739 ORTHO05D033954 8.2e-11 72.4 69 49.3
Nn1g07096 Nelumbo nucifera HOM05D005739 ORTHO05D007740 3.8e-08 63.5 83 42.2
arahy.Tifrunner.gnm1.ann1.ZUJ3H1 Arachis hypogaea HOM05D005739 ORTHO05D083715 8.5e-08 62.4 35 80.0


User provided reference genes

Program Settings