Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.D01199 Eucalyptus grandis HOM05D007841 ORTHO05D009919 1.1e-33 146.0 72 100.0
PGR004G1954 Punica granatum HOM05D007841 ORTHO05D009919 8.4e-29 129.8 70 92.9
Gohir.D12G101400 Gossypium hirsutum HOM05D007841 ORTHO05D009919 1.4e-28 129.0 72 87.5
Gorai.008G110500 Gossypium raimondii HOM05D007841 ORTHO05D009919 1.4e-28 129.0 72 87.5
CiPaw.14G018000 Carya illinoinensis HOM05D007841 ORTHO05D009919 2.5e-28 128.3 72 87.5
Phvul.008G138900 Phaseolus vulgaris HOM05D007841 ORTHO05D009919 5.5e-28 127.1 72 86.1
Duzib138G1421 Durio zibethinus HOM05D007841 ORTHO05D009919 9.3e-28 126.3 72 86.1
Gohir.A12G098200 Gossypium hirsutum HOM05D007841 ORTHO05D009919 1.2e-27 125.9 72 84.7
arahy.Tifrunner.gnm1.ann1.K94MSK Arachis hypogaea HOM05D007841 ORTHO05D009919 1.3e-26 122.5 69 85.5
Hma1.2p1_2138F.1_g314930 Hydrangea macrophylla HOM05D007841 ORTHO05D009919 1.3e-26 122.5 71 84.5
Prupe.2G120100 Prunus persica HOM05D007841 ORTHO05D009919 1.3e-26 122.5 72 81.9
Oeu034848.1 Olea europaea HOM05D007841 ORTHO05D009919 1.8e-26 122.1 72 83.3
Thecc.01G400700 Theobroma cacao HOM05D007841 ORTHO05D009919 3.9e-26 120.9 74 87.8
Atru.chr5.91 Acer truncatum HOM05D007841 ORTHO05D009919 6.7e-26 120.2 75 82.7
EL10Ac1g00736 Beta vulgaris HOM05D007841 ORTHO05D009919 8.7e-26 119.8 72 80.6
COL.COLO4_12370 Corchorus olitorius HOM05D007841 ORTHO05D009919 8.7e-26 119.8 72 81.9
CsaV3_3G010620 Cucumis sativus L. HOM05D007841 ORTHO05D009919 1.5e-25 119.0 70 84.3
Psat3g152880 Pisum sativum HOM05D007841 ORTHO05D009919 1.5e-25 119.0 72 81.9
Glyma.08G340600 Glycine max HOM05D007841 ORTHO05D009919 1.9e-25 118.6 72 81.9
Medtr7g050540 Medicago truncatula HOM05D007841 ORTHO05D009919 1.9e-25 118.6 72 81.9
Actinidia30942 Actinidia chinensis HOM05D007841 ORTHO05D009919 2.5e-25 118.2 73 83.6
Cc02_g25410 Coffea canephora HOM05D007841 ORTHO05D009919 2.5e-25 118.2 70 81.4
Manes.05G057100 Manihot esculenta HOM05D007841 ORTHO05D009919 4.3e-25 117.5 66 86.4
ClCG05G003010 Citrullus lanatus HOM05D007841 ORTHO05D009919 7.4e-25 116.7 71 81.7
MD02G1221100 Malus domestica HOM05D007841 ORTHO05D009919 7.4e-25 116.7 72 79.2
Potri.014G051850 Populus trichocarpa HOM05D007841 ORTHO05D009919 1.3e-24 115.9 72 79.2
CANSAT25G3347 Cannabis sativa HOM05D007841 ORTHO05D009919 1.6e-24 115.5 69 85.5
CANSAT25G3825 Cannabis sativa HOM05D007841 ORTHO05D009919 1.6e-24 115.5 69 85.5
Lj1g0014858 Lotus japonicus HOM05D007841 ORTHO05D009919 1.6e-24 115.5 72 80.6
HanXRQChr01g0019691 Helianthus annuus HOM05D007841 ORTHO05D009919 2.1e-24 115.2 71 78.9
Lalb_Chr03g0040951 Lupinus albus HOM05D007841 ORTHO05D009919 2.8e-24 114.8 72 79.2
Solyc01g088770.3 Solanum lycopersicum HOM05D007841 ORTHO05D009919 2.8e-24 114.8 70 80.0
Sopen01g035610 Solanum pennellii HOM05D007841 ORTHO05D009919 2.8e-24 114.8 70 80.0
PGSC0003DMG400001726 Solanum tuberosum HOM05D007841 ORTHO05D009919 2.8e-24 114.8 70 80.0
Lsat_1_v5_gn_1_83981 Lactuca sativa HOM05D007841 ORTHO05D009919 3.7e-24 114.4 71 80.3
RcHm_v2.0_Chr1g0345181 Rosa chinensis HOM05D007841 ORTHO05D009919 3.7e-24 114.4 71 78.9
THA.LOC104814059 Tarenaya hassleriana HOM05D007841 ORTHO05D009919 4.8e-24 114.0 67 85.1
CAN.G756.38 Capsicum annuum HOM05D007841 ORTHO05D009919 8.2e-24 113.2 70 80.0
PSO675G0834 Papaver somniferum HOM05D007841 ORTHO05D009919 8.2e-24 113.2 68 82.4
Sed0011386 Sechium edule HOM05D007841 ORTHO05D009919 8.2e-24 113.2 70 81.4
ECA248G0141 Erigeron canadensis HOM05D007841 ORTHO05D009919 1.8e-23 112.1 71 77.5
MD07G1096500 Malus domestica HOM05D007841 ORTHO05D009919 2.4e-23 111.7 71 80.3
AL1G10060 Arabidopsis lyrata HOM05D007841 ORTHO05D009919 3.1e-23 111.3 72 76.4
AT1G02160 Arabidopsis thaliana HOM05D007841 ORTHO05D009919 5.3e-23 110.5 72 75.0
PSO732G0215 Papaver somniferum HOM05D007841 ORTHO05D009919 5.3e-23 110.5 67 82.1
Carub.0001s0004 Capsella rubella HOM05D007841 ORTHO05D009919 6.9e-23 110.2 72 75.0
BcaB03g13636 Brassica carinata HOM05D000300 ORTHO05D000383 1.5e-22 109.0 63 84.1
Thhalv10009237m.g Eutrema salsugineum HOM05D007841 ORTHO05D009919 2.0e-22 108.6 63 84.1
CARHR000160 Cardamine hirsuta HOM05D007841 ORTHO05D009919 2.6e-22 108.2 68 79.4
C05p00040 Brassica napus HOM05D007841 ORTHO05D009919 5.8e-22 107.1 63 82.5
BolC5t28791H Brassica oleracea HOM05D007841 ORTHO05D009919 5.8e-22 107.1 63 82.5
Aqoxy7G00835 Aquilegia oxysepala HOM05D007841 ORTHO05D009919 3.8e-21 104.4 65 80.0
Haze_02887 Corylus avellana HOM05D000061 ORTHO05D000915 5.0e-21 104.0 60 80.0
FvH4_7g09140 Fragaria vesca HOM05D007841 ORTHO05D009919 6.5e-21 103.6 71 74.6
GSVIVG01018320001 Vitis vinifera HOM05D007841 ORTHO05D009919 1.1e-20 102.8 72 76.4
Migut.N01723 Erythranthe guttata HOM05D007841 ORTHO05D009919 1.9e-20 102.1 70 72.9
Hund17114 Selenicereus undatus HOM05D007841 ORTHO05D009919 2.5e-20 101.7 56 83.9
Os04g0665000 Oryza sativa ssp. japonica HOM05D007841 ORTHO05D009919 3.5e-19 97.8 68 73.5
FAN06G3108 Fragaria x ananassa HOM05D007841 ORTHO05D009919 6.1e-19 97.1 66 74.2
arahy.Tifrunner.gnm1.ann1.X5EUJ4 Arachis hypogaea HOM05D007841 ORTHO05D009919 1.3e-18 95.9 54 83.3
Zm00001eb067220 Zea mays HOM05D007841 ORTHO05D009919 1.3e-18 95.9 65 75.4
unitig_22.g6702 Utricularia gibba HOM05D007841 ORTHO05D009919 2.3e-18 95.1 63 74.6
Sc02g0003210 Simmondsia chinensis HOM05D007841 ORTHO05D009919 3.9e-18 94.4 55 81.8
Ciclev10023064m.g Citrus clementina HOM05D007841 ORTHO05D009919 1.1e-17 92.8 50 88.0
Nitab4.5_0004425g0050 Nicotiana tabacum HOM05D007841 ORTHO05D009919 1.9e-17 92.0 64 70.3
CSS0006405 Camellia sinensis var. sinensis HOM05D007841 ORTHO05D009919 9.7e-17 89.7 55 76.4
Peaxi162Scf00793g00363 Petunia axillaris HOM05D007841 ORTHO05D009919 1.3e-16 89.4 54 77.8
Nn6g33742 Nelumbo nucifera HOM05D007841 ORTHO05D009919 2.2e-16 88.6 56 73.2
PSO732G0130 Papaver somniferum HOM05D007841 ORTHO05D009919 3.7e-16 87.8 52 80.8
BraA10t42285Z Brassica rapa HOM05D007841 ORTHO05D009919 8.2e-16 86.7 52 78.8
SalBow4G0679 Salvia bowleyana HOM05D007841 ORTHO05D009919 1.1e-15 86.3 55 70.9
Sp1g00090 Schrenkiella parvula HOM05D007841 ORTHO05D009919 1.1e-15 86.3 52 78.8
FAN01G1055 Fragaria x ananassa HOM05D007841 ORTHO05D009919 5.3e-15 84.0 55 76.4
FAN03G2201 Fragaria x ananassa HOM05D007841 ORTHO05D009919 5.3e-15 84.0 55 76.4
AUR62023385 Chenopodium quinoa HOM05D007841 ORTHO05D009919 9.0e-15 83.2 56 69.6
AUR62013771 Chenopodium quinoa HOM05D007841 ORTHO05D009919 1.2e-14 82.8 56 69.6
Pp3c22_2080 Physcomitrium patens HOM05D007841 ORTHO05D009919 2.2e-13 78.6 64 62.5
Sabra14G0036700 Salix brachista HOM05D007841 ORTHO05D009919 3.6e-11 71.2 41 85.4
Aa31LG1G11570 Aethionema arabicum HOM05D007841 ORTHO05D009919 6.1e-11 70.5 48 72.9
Mapoly0181s0011 Marchantia polymorpha HOM05D007841 ORTHO05D009919 1.0e-10 69.7 70 54.3
AagrBONN_evm.TU.Sc2ySwM_228.3132 Anthoceros agrestis HOM05D007841 ORTHO05D009919 3.0e-10 68.2 52 65.4
TAR375G0262 Trochodendron aralioides HOM05D006103 ORTHO05D007468 1.5e-09 65.9 72 55.6
Eucgr.G01056 Eucalyptus grandis HOM05D003560 ORTHO05D009919 1.7e-08 62.4 30 100.0
Actinidia05779 Actinidia chinensis HOM05D007841 ORTHO05D009919 2.8e-08 61.6 33 81.8
CAN.G756.35 Capsicum annuum HOM05D007841 ORTHO05D009919 2.4e-07 58.5 33 84.8


User provided reference genes

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