Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.D01138 Eucalyptus grandis HOM05D007737 ORTHO05D009754 3.1e-85 318.5 173 100.0
Oeu029042.1 Olea europaea HOM05D007737 ORTHO05D009754 5.7e-39 164.9 162 51.2
Sed0019089 Sechium edule HOM05D007737 ORTHO05D009754 3.7e-38 162.2 171 58.5
Dinv43570 Davidia involucrata HOM05D007737 ORTHO05D009754 6.3e-38 161.4 160 58.1
Thecc.10G000900 Theobroma cacao HOM05D007737 ORTHO05D009754 8.2e-38 161.0 158 62.0
QL04p025132 Quercus lobata HOM05D007737 ORTHO05D009754 2.4e-37 159.5 160 61.2
Manes.12G126400 Manihot esculenta HOM05D007737 ORTHO05D009754 9.1e-37 157.5 175 48.0
MD02G1228500 Malus domestica HOM05D007737 ORTHO05D009754 1.5e-36 156.8 151 64.9
Glyma.02G276300 Glycine max HOM05D007737 ORTHO05D009754 4.5e-36 155.2 114 75.4
PGR119G2515 Punica granatum HOM05D007737 ORTHO05D009754 4.5e-36 155.2 147 59.9
CsaV3_6G006540 Cucumis sativus L. HOM05D007737 ORTHO05D009754 7.7e-36 154.5 137 65.7
Duzib128G0131 Durio zibethinus HOM05D007737 ORTHO05D009754 1.0e-35 154.1 156 60.3
Lalb_Chr17g0347681 Lupinus albus HOM05D007737 ORTHO05D009754 1.3e-35 153.7 127 69.3
CSS0024286 Camellia sinensis var. sinensis HOM05D007737 ORTHO05D009754 3.8e-35 152.1 176 58.0
Cc02_g25850 Coffea canephora HOM05D007737 ORTHO05D009754 8.5e-35 151.0 159 54.1
Hma1.2p1_0601F.1_g187210 Hydrangea macrophylla HOM05D007737 ORTHO05D009754 1.1e-34 150.6 158 51.9
Gohir.A05G333700 Gossypium hirsutum HOM05D007737 ORTHO05D009754 1.4e-34 150.2 128 56.2
LjContig00564g0006359 Lotus japonicus HOM05D007737 ORTHO05D009754 1.4e-34 150.2 117 73.5
arahy.Tifrunner.gnm1.ann1.HH45UC Arachis hypogaea HOM05D007737 ORTHO05D009754 2.5e-34 149.4 141 63.1
arahy.Tifrunner.gnm1.ann1.BW18VB Arachis hypogaea HOM05D007737 ORTHO05D009754 5.5e-34 148.3 117 70.9
Gohir.D04G072800 Gossypium hirsutum HOM05D007737 ORTHO05D009754 1.6e-33 146.7 126 55.6
Gorai.012G081800 Gossypium raimondii HOM05D007737 ORTHO05D009754 1.6e-33 146.7 126 55.6
MSTRG.4970 Avicennia marina HOM05D007737 ORTHO05D009754 2.1e-33 146.4 137 51.8
Lsat_1_v5_gn_7_11721 Lactuca sativa HOM05D007737 ORTHO05D009754 7.9e-33 144.4 149 49.0
COL.COLO4_19346 Corchorus olitorius HOM05D007737 ORTHO05D009754 1.0e-32 144.1 157 47.1
ECA236G0282 Erigeron canadensis HOM05D007737 ORTHO05D009754 1.8e-32 143.3 117 69.2
Migut.N01704 Erythranthe guttata HOM05D007737 ORTHO05D009754 3.0e-32 142.5 129 52.7
Psat0s2829g0120 Pisum sativum HOM05D007737 ORTHO05D009754 3.9e-32 142.1 114 64.0
Sc02g0003320 Simmondsia chinensis HOM05D007737 ORTHO05D009754 5.1e-32 141.7 135 60.7
Ciclev10022762m.g Citrus clementina HOM05D007737 ORTHO05D009754 2.0e-31 139.8 134 58.2
Phvul.008G205200 Phaseolus vulgaris HOM05D007737 ORTHO05D009754 2.0e-31 139.8 114 71.1
Solyc06g051160.4 Solanum lycopersicum HOM05D007737 ORTHO05D009754 2.0e-31 139.8 118 52.5
PGSC0003DMG400015652 Solanum tuberosum HOM05D007737 ORTHO05D009754 4.4e-31 138.7 118 52.5
CiPaw.13G019700 Carya illinoinensis HOM05D007737 ORTHO05D009754 5.7e-31 138.3 147 57.8
Psat0s4349g0040 Pisum sativum HOM05D007737 ORTHO05D009754 5.7e-31 138.3 112 62.5
HanXRQChr06g0168511 Helianthus annuus HOM05D007737 ORTHO05D009754 7.4e-31 137.9 130 53.8
arahy.Tifrunner.gnm1.ann1.J0MG2W Arachis hypogaea HOM05D007737 ORTHO05D009754 9.7e-31 137.5 117 57.3
FvH4_7g08430 Fragaria vesca HOM05D007737 ORTHO05D009754 9.7e-31 137.5 150 59.3
Psat0s4932g0040 Pisum sativum HOM05D007737 ORTHO05D009754 1.7e-30 136.7 114 65.8
FAN03G2224 Fragaria x ananassa HOM05D007737 ORTHO05D009754 3.7e-30 135.6 128 66.4
RcHm_v2.0_Chr0c20g0500251 Rosa chinensis HOM05D007737 ORTHO05D009754 4.8e-30 135.2 160 45.0
Sabra14G0139900 Salix brachista HOM05D007737 ORTHO05D009754 1.1e-29 134.0 126 53.2
CAN.G1183.16 Capsicum annuum HOM05D007737 ORTHO05D009754 1.2e-28 130.6 102 69.6
Nitab4.5_0011440g0030 Nicotiana tabacum HOM05D007737 ORTHO05D009754 1.5e-28 130.2 137 47.4
CANSAT35G0994 Cannabis sativa HOM05D007737 ORTHO05D009754 3.5e-28 129.0 114 51.8
arahy.Tifrunner.gnm1.ann1.4BAK6K Arachis hypogaea HOM05D004879 ORTHO05D009754 4.5e-28 128.6 83 68.7
AUR62023349 Chenopodium quinoa HOM05D007737 ORTHO05D009754 4.5e-28 128.6 140 57.9
DCAR_029388 Daucus carota HOM05D007737 ORTHO05D009754 1.0e-27 127.5 108 54.6
TAR375G1083 Trochodendron aralioides HOM05D007737 ORTHO05D009754 2.2e-27 126.3 138 47.1
GSVIVG01018401001 Vitis vinifera HOM05D007737 ORTHO05D009754 2.9e-27 125.9 137 59.9
AUR62013808 Chenopodium quinoa HOM05D007737 ORTHO05D009754 5.5e-26 121.7 133 57.1
FAN10G0020 Fragaria x ananassa HOM05D007737 ORTHO05D009754 5.5e-26 121.7 122 63.9
Atru.chr5.19 Acer truncatum HOM05D007737 ORTHO05D009754 3.6e-25 119.0 107 65.4
PSO210G3843 Papaver somniferum HOM05D007737 ORTHO05D009754 6.1e-25 118.2 125 57.6
Actinidia05801 Actinidia chinensis HOM05D007737 ORTHO05D009754 1.0e-24 117.5 135 43.0
PSO210G3425 Papaver somniferum HOM05D007737 ORTHO05D009754 1.4e-24 117.1 124 58.1
Actinidia30967 Actinidia chinensis HOM05D007737 ORTHO05D009754 2.3e-24 116.3 157 42.0
SalBow4G2387 Salvia bowleyana HOM05D007737 ORTHO05D009754 2.3e-24 116.3 194 37.6
Sopen06g017020 Solanum pennellii HOM05D007737 ORTHO05D009754 3.0e-24 115.9 85 58.8
TWI23G0770 Tripterygium wilfordii HOM05D007737 ORTHO05D009754 3.0e-24 115.9 128 46.1
Os04g0589200 Oryza sativa ssp. japonica HOM05D007737 ORTHO05D009754 4.0e-24 115.5 124 57.3
TWI14G0846 Tripterygium wilfordii HOM05D007737 ORTHO05D009754 7.5e-23 111.3 141 41.1
Potri.014G179800 Populus trichocarpa HOM05D007737 ORTHO05D009754 9.7e-23 110.9 111 55.9
Prupe.2G111200 Prunus persica HOM05D007737 ORTHO05D009754 9.7e-23 110.9 116 61.2
SGA_v2.0_scaffold77G25232 Striga asiatica HOM05D007737 ORTHO05D009754 2.2e-22 109.8 122 46.7
Medtr5g088570 Medicago truncatula HOM05D004879 ORTHO05D008271 4.8e-22 108.6 77 63.6
unitig_22.g5837 Utricularia gibba HOM05D007737 ORTHO05D009754 2.4e-21 106.3 80 75.0
Mapoly0099s0043 Marchantia polymorpha HOM05D007737 ORTHO05D009754 1.2e-20 104.0 91 64.8
BraA01t03730Z Brassica rapa HOM05D007737 ORTHO05D009754 1.6e-20 103.6 132 47.0
CARHR093000 Cardamine hirsuta HOM05D007737 ORTHO05D009754 4.5e-20 102.1 130 50.8
Thhalv10021734m.g Eutrema salsugineum HOM05D007737 ORTHO05D009754 7.7e-20 101.3 132 53.0
THA.LOC104806480 Tarenaya hassleriana HOM05D007737 ORTHO05D009754 1.3e-19 100.5 134 48.5
Sp3g15800 Schrenkiella parvula HOM05D007737 ORTHO05D009754 1.7e-19 100.1 132 49.2
Nitab4.5_0000507g0110 Nicotiana tabacum HOM05D007737 ORTHO05D009754 5.0e-19 98.6 101 47.5
HPP92_007265 Vanilla planifolia HOM05D007737 ORTHO05D009754 5.0e-19 98.6 115 54.8
Carub.0003s1738 Capsella rubella HOM05D007737 ORTHO05D009754 6.5e-19 98.2 108 52.8
AL3G30770 Arabidopsis lyrata HOM05D007737 ORTHO05D009754 3.2e-18 95.9 107 54.2
AT3G17668 Arabidopsis thaliana HOM05D007737 ORTHO05D009754 7.2e-18 94.7 107 54.2
BcaC09g48726 Brassica carinata HOM05D001802 ORTHO05D001788 7.2e-18 94.7 132 44.7
C01p46550 Brassica napus HOM05D007737 ORTHO05D009754 9.4e-18 94.4 132 44.7
Pp3c17_5190 Physcomitrium patens HOM05D007737 ORTHO05D009754 1.0e-16 90.9 100 56.0
BcaB04g20827 Brassica carinata HOM05D001802 ORTHO05D001788 1.8e-16 90.1 132 45.5
ClCG06G000750 Citrullus lanatus HOM05D007737 ORTHO05D009754 8.8e-16 87.8 58 67.2
Pp3c8_23020 Physcomitrium patens HOM05D007737 ORTHO05D009754 4.4e-15 85.5 100 52.0
Aa31LG8G4530 Aethionema arabicum HOM05D007345 ORTHO05D009277 5.7e-15 85.1 126 36.5
FAN06G2876 Fragaria x ananassa HOM05D007737 ORTHO05D009754 1.7e-14 83.6 76 59.2
AagrBONN_evm.TU.Sc2ySwM_344.418 Anthoceros agrestis HOM05D007737 ORTHO05D009754 2.9e-11 72.8 148 30.4
HPP92_007269 Vanilla planifolia HOM05D007737 ORTHO05D009754 1.1e-10 70.9 67 47.8
Aqoxy3G02490 Aquilegia oxysepala HOM05D007737 ORTHO05D009754 6.1e-09 65.1 96 47.9
vmacro13551 Vaccinium macrocarpon HOM05D007737 ORTHO05D009754 1.8e-08 63.5 61 45.9
A01p36650 Brassica napus HOM05D007737 ORTHO05D009754 9.8e-07 57.8 69 39.1
MELO3C022466.2 Cucumis melo HOM05D007737 ORTHO05D009754 2.2e-06 56.6 158 32.3


User provided reference genes

Program Settings