Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.D01109 Eucalyptus grandis HOM05D005161 ORTHO05D006816 0.0e+00 1155.2 581 100.0
Eucgr.D01108 Eucalyptus grandis HOM05D005161 ORTHO05D006816 4.7e-279 964.1 609 83.9
Eucgr.D01501 Eucalyptus grandis HOM05D005161 ORTHO05D006816 2.0e-253 879.0 657 72.1
Eucgr.D01500 Eucalyptus grandis HOM05D005161 ORTHO05D006816 3.3e-240 835.1 657 70.2
Eucgr.D01507 Eucalyptus grandis HOM05D005161 ORTHO05D006816 5.6e-240 834.3 656 70.1
Eucgr.D01504 Eucalyptus grandis HOM05D005161 ORTHO05D006816 1.8e-177 626.7 449 74.2
Eucgr.D01511 Eucalyptus grandis HOM05D005161 ORTHO05D006816 4.2e-171 605.5 536 63.2
Eucgr.L00332 Eucalyptus grandis HOM05D005161 ORTHO05D006816 2.7e-141 506.5 650 47.2
Eucgr.D01493 Eucalyptus grandis HOM05D005161 ORTHO05D006816 8.6e-140 501.5 654 46.5
Eucgr.L00330 Eucalyptus grandis HOM05D005161 ORTHO05D006816 2.3e-137 493.4 654 45.7
Eucgr.L00328 Eucalyptus grandis HOM05D005161 ORTHO05D006816 1.2e-133 481.1 653 46.7
Eucgr.D01495 Eucalyptus grandis HOM05D005161 ORTHO05D006816 3.5e-133 479.6 626 46.8
Eucgr.D01492 Eucalyptus grandis HOM05D005161 ORTHO05D006816 4.3e-131 472.6 631 46.1
Eucgr.D01490 Eucalyptus grandis HOM05D005161 ORTHO05D006816 3.2e-118 429.9 651 43.6
Eucgr.D01291 Eucalyptus grandis HOM05D005161 ORTHO05D006816 1.6e-117 427.6 673 41.2
Eucgr.D01497 Eucalyptus grandis HOM05D005161 ORTHO05D006816 4.3e-115 419.5 630 44.0
Eucgr.D00810 Eucalyptus grandis HOM05D005161 ORTHO05D006816 6.9e-113 412.1 677 39.9
Eucgr.D00811 Eucalyptus grandis HOM05D005161 ORTHO05D006816 9.0e-113 411.8 659 40.8
QL93p0073_0706 Quercus lobata HOM05D005161 ORTHO05D006816 2.1e-101 374.0 643 38.6
Cfa000273 Carpinus fangiana HOM05D005161 ORTHO05D006816 6.9e-97 359.0 643 37.2
TWI81G0680 Tripterygium wilfordii HOM05D005161 ORTHO05D006816 9.0e-97 358.6 648 37.3
QL05p075077 Quercus lobata HOM05D005161 ORTHO05D006816 1.9e-94 350.9 670 37.3
QL04p088669 Quercus lobata HOM05D005161 ORTHO05D006816 5.5e-94 349.4 659 38.5
Eucgr.L02157 Eucalyptus grandis HOM05D005161 ORTHO05D006816 1.0e-92 345.1 444 44.8
Eucgr.D00807 Eucalyptus grandis HOM05D005161 ORTHO05D006816 3.9e-92 343.2 428 46.7
Eucgr.D01478 Eucalyptus grandis HOM05D005161 ORTHO05D006816 1.9e-91 340.9 401 49.9
Eucgr.D00371 Eucalyptus grandis HOM05D005161 ORTHO05D006816 1.0e-87 328.6 662 35.6
COL.COLO4_31730 Corchorus olitorius HOM05D005161 ORTHO05D006816 1.7e-87 327.8 652 36.5
Eucgr.D00809 Eucalyptus grandis HOM05D005161 ORTHO05D006816 2.9e-87 327.0 441 44.0
Eucgr.D00808 Eucalyptus grandis HOM05D005161 ORTHO05D006816 3.8e-87 326.6 435 44.8
TWI63G0153 Tripterygium wilfordii HOM05D005161 ORTHO05D006816 2.5e-86 323.9 639 37.2
Eucgr.D00375 Eucalyptus grandis HOM05D005161 ORTHO05D006816 2.7e-85 320.5 645 36.0
Haze_06742 Corylus avellana HOM05D005161 ORTHO05D006816 4.6e-85 319.7 603 37.3
Eucgr.D00396 Eucalyptus grandis HOM05D005161 ORTHO05D006816 1.8e-84 317.8 638 35.0
Eucgr.D00362 Eucalyptus grandis HOM05D005161 ORTHO05D006816 3.3e-83 313.5 675 35.0
Eucgr.D00388 Eucalyptus grandis HOM05D005161 ORTHO05D006816 9.7e-83 312.0 575 36.5
Eucgr.D00806 Eucalyptus grandis HOM05D005161 ORTHO05D006816 1.3e-82 311.6 426 44.6
Eucgr.D00400 Eucalyptus grandis HOM05D005161 ORTHO05D006816 1.6e-82 311.2 633 36.0
Eucgr.D00403 Eucalyptus grandis HOM05D005161 ORTHO05D006816 8.2e-82 308.9 627 34.9
MBI18_g06807_MAGBIO Magnolia biondii HOM05D005161 ORTHO05D006816 1.4e-81 308.1 680 34.3
Cfa000271 Carpinus fangiana HOM05D005161 ORTHO05D006816 1.2e-80 305.1 657 34.4
Eucgr.D00394 Eucalyptus grandis HOM05D005161 ORTHO05D006816 1.2e-80 305.1 639 34.3
Eucgr.D00381 Eucalyptus grandis HOM05D005161 ORTHO05D006816 5.0e-79 299.7 673 33.4
Manes.16G012100 Manihot esculenta HOM05D005161 ORTHO05D006816 6.5e-79 299.3 405 43.2
Eucgr.D00377 Eucalyptus grandis HOM05D005161 ORTHO05D006816 1.1e-78 298.5 628 35.4
Eucgr.D00361 Eucalyptus grandis HOM05D005161 ORTHO05D006816 3.2e-78 297.0 621 34.1
Eucgr.D00366 Eucalyptus grandis HOM05D005161 ORTHO05D006816 3.2e-78 297.0 638 35.3
Eucgr.D00386 Eucalyptus grandis HOM05D005161 ORTHO05D006816 5.5e-78 296.2 655 34.4
Eucgr.D00365 Eucalyptus grandis HOM05D005161 ORTHO05D006816 7.2e-78 295.8 646 33.9
Eucgr.D01245 Eucalyptus grandis HOM05D005161 ORTHO05D006816 7.2e-78 295.8 639 35.5
Eucgr.D00380 Eucalyptus grandis HOM05D005161 ORTHO05D006816 6.1e-77 292.7 669 33.0
Eucgr.D00378 Eucalyptus grandis HOM05D005161 ORTHO05D006816 2.5e-75 287.3 582 34.7
TWI38G1862 Tripterygium wilfordii HOM05D005161 ORTHO05D006816 5.7e-75 286.2 667 33.1
Eucgr.D00385 Eucalyptus grandis HOM05D005161 ORTHO05D006816 9.7e-75 285.4 644 34.6
MBI18_g32337_MAGBIO Magnolia biondii HOM05D005161 ORTHO05D006816 9.7e-75 285.4 695 32.7
Eucgr.L00335 Eucalyptus grandis HOM05D005161 ORTHO05D006816 6.3e-74 282.7 492 40.0
Eucgr.D00363 Eucalyptus grandis HOM05D005161 ORTHO05D006816 2.4e-73 280.8 643 32.8
Eucgr.D00397 Eucalyptus grandis HOM05D005161 ORTHO05D006816 1.9e-70 271.2 534 36.5
TWI38G0750 Tripterygium wilfordii HOM05D005161 ORTHO05D006816 1.2e-69 268.5 666 33.0
Eucgr.D00117 Eucalyptus grandis HOM05D005161 ORTHO05D006816 1.0e-68 265.4 602 32.1
MBI18_g01406_MAGBIO Magnolia biondii HOM05D005161 ORTHO05D006816 6.7e-68 262.7 615 33.0
Eucgr.D00357 Eucalyptus grandis HOM05D005161 ORTHO05D006816 5.3e-65 253.1 451 35.9
MBI18_g25250_MAGBIO Magnolia biondii HOM05D005161 ORTHO05D006816 5.0e-63 246.5 689 32.4
MBI18_g42473_MAGBIO Magnolia biondii HOM05D005161 ORTHO05D006816 7.2e-62 242.7 717 30.7
MBI18_g18530_MAGBIO Magnolia biondii HOM05D005161 ORTHO05D006816 2.1e-61 241.1 685 31.4
Eucgr.D01512 Eucalyptus grandis HOM05D005161 ORTHO05D006816 4.7e-61 240.0 592 32.1
MBI18_g03709_MAGBIO Magnolia biondii HOM05D005161 ORTHO05D006816 1.3e-58 231.9 500 35.2
Eucgr.D00368 Eucalyptus grandis HOM05D005161 ORTHO05D006816 3.1e-57 227.3 470 35.3
MBI18_g01412_MAGBIO Magnolia biondii HOM05D005161 ORTHO05D006816 7.0e-57 226.1 642 31.2
Eucgr.D00364 Eucalyptus grandis HOM05D005161 ORTHO05D006816 5.9e-56 223.0 384 39.1
MBI18_g01409_MAGBIO Magnolia biondii HOM05D005161 ORTHO05D006816 2.2e-55 221.1 405 37.0
MBI18_g03708_MAGBIO Magnolia biondii HOM05D005161 ORTHO05D006816 4.0e-52 210.3 625 29.9
MBI18_g12380_MAGBIO Magnolia biondii HOM05D005161 ORTHO05D006816 2.7e-48 197.6 499 31.3
Os02g0297200 Oryza sativa ssp. japonica HOM05D005161 ORTHO05D006816 1.0e-47 195.7 685 27.3
Eucgr.L01591 Eucalyptus grandis HOM05D005161 ORTHO05D006816 1.7e-47 194.9 249 44.6
Zm00001eb283300 Zea mays HOM05D005161 ORTHO05D006816 1.5e-43 181.8 655 29.0
Eucgr.D00360 Eucalyptus grandis HOM05D005161 ORTHO05D006816 3.4e-43 180.6 281 37.7
Os05g0508500 Oryza sativa ssp. japonica HOM05D005161 ORTHO05D006816 7.5e-43 179.5 657 28.8
Eucgr.D01505 Eucalyptus grandis HOM05D005161 ORTHO05D006816 1.7e-39 168.3 126 66.7
Zm00001eb352900 Zea mays HOM05D005161 ORTHO05D006816 6.6e-39 166.4 621 27.9
Eucgr.D00383 Eucalyptus grandis HOM05D005161 ORTHO05D006816 9.8e-35 152.5 295 34.9
Eucgr.D00392 Eucalyptus grandis HOM05D005161 ORTHO05D006816 4.9e-34 150.2 308 35.4
Zm00001eb369570 Zea mays HOM05D005161 ORTHO05D006816 3.2e-33 147.5 398 30.4
Os03g0141800 Oryza sativa ssp. japonica HOM05D005161 ORTHO05D006816 5.4e-33 146.7 373 31.4
Os01g0143400 Oryza sativa ssp. japonica HOM05D005161 ORTHO05D006816 9.2e-33 146.0 488 26.2
Zm00001eb341380 Zea mays HOM05D005161 ORTHO05D006816 7.8e-32 142.9 470 27.4
Os10g0450400 Oryza sativa ssp. japonica HOM05D005161 ORTHO05D006816 9.5e-30 136.0 469 26.9
Os11g0617700 Oryza sativa ssp. japonica HOM05D005161 ORTHO05D006816 1.6e-29 135.2 478 27.6
Zm00001eb118070 Zea mays HOM05D005161 ORTHO05D006816 2.8e-29 134.4 702 24.5
Eucgr.D00804 Eucalyptus grandis HOM05D005161 ORTHO05D006816 1.4e-28 132.1 271 34.3
Zm00001eb299590 Zea mays HOM05D005161 ORTHO05D006816 1.2e-27 129.0 655 25.0
Os07g0115700 Oryza sativa ssp. japonica HOM05D005161 ORTHO05D006816 3.4e-27 127.5 486 26.1
Zm00001eb131210 Zea mays HOM05D005161 ORTHO05D037202 5.4e-25 120.2 572 25.7
Zm00001eb298730 Zea mays HOM05D005161 ORTHO05D006816 1.6e-24 118.6 617 24.0
Eucgr.D00387 Eucalyptus grandis HOM05D005161 ORTHO05D006816 2.7e-24 117.9 211 38.9
Os01g0373500 Oryza sativa ssp. japonica HOM05D005161 ORTHO05D006816 3.9e-23 114.0 678 24.5
Zm00001eb128430 Zea mays HOM05D005161 ORTHO05D037202 7.3e-22 109.8 573 25.1
Os11g0171100 Oryza sativa ssp. japonica HOM05D005161 ORTHO05D006816 4.7e-21 107.1 405 27.9
Zm00001eb112890 Zea mays HOM05D005161 ORTHO05D006816 7.5e-19 99.8 533 25.1
Zm00001eb269260 Zea mays HOM05D005161 ORTHO05D020953 7.5e-19 99.8 492 25.0
Zm00001eb299120 Zea mays HOM05D005161 ORTHO05D006816 7.5e-19 99.8 437 24.0
Os06g0119300 Oryza sativa ssp. japonica HOM05D005161 ORTHO05D020953 2.9e-18 97.8 475 24.6
Os11g0619500 Oryza sativa ssp. japonica HOM05D005161 ORTHO05D006816 3.7e-18 97.4 341 26.1
Zm00001eb299610 Zea mays HOM05D005161 ORTHO05D006816 1.9e-17 95.1 444 25.2
Os06g0119100 Oryza sativa ssp. japonica HOM05D005161 ORTHO05D020953 2.1e-16 91.7 512 24.6
Os11g0618700 Oryza sativa ssp. japonica HOM05D005161 ORTHO05D006816 4.6e-16 90.5 659 23.8
Zm00001eb112870 Zea mays HOM05D005161 ORTHO05D006816 4.6e-16 90.5 498 25.5
Zm00001eb117790 Zea mays HOM05D005161 ORTHO05D006816 6.0e-16 90.1 501 24.2
Zm00001eb299110 Zea mays HOM05D005161 ORTHO05D006816 1.7e-15 88.6 600 25.0
Zm00001eb440760 Zea mays HOM05D005161 ORTHO05D006816 1.5e-14 85.5 411 26.8
Os01g0333600 Oryza sativa ssp. japonica HOM05D005161 ORTHO05D037202 9.5e-14 82.8 536 22.6
Os06g0120200 Oryza sativa ssp. japonica HOM05D005161 ORTHO05D020953 9.5e-14 82.8 452 24.6
Zm00001eb299560 Zea mays HOM05D005161 ORTHO05D006816 4.7e-13 80.5 661 22.7
EL10Ac1g01915 Beta vulgaris HOM05D000432 ORTHO05D000320 4.0e-12 77.4 611 21.4
Os06g0124300 Oryza sativa ssp. japonica HOM05D005161 ORTHO05D020953 8.9e-12 76.3 481 23.5
PGR102G2712 Punica granatum HOM05D000432 ORTHO05D000320 8.9e-12 76.3 555 23.8
Os10g0482200 Oryza sativa ssp. japonica HOM05D005161 ORTHO05D300363 1.5e-11 75.5 486 22.6
AUR62044086 Chenopodium quinoa HOM05D000432 ORTHO05D000320 2.6e-11 74.7 641 21.1
MBI18_g01408_MAGBIO Magnolia biondii HOM05D005161 ORTHO05D006816 3.4e-11 74.3 163 33.7
MBI18_g41152_MAGBIO Magnolia biondii HOM05D005161 ORTHO05D006816 4.4e-11 73.9 81 43.2
Aqoxy1G04206 Aquilegia oxysepala HOM05D000432 ORTHO05D000320 1.3e-10 72.4 579 22.5
Zm00001eb299570 Zea mays HOM05D005161 ORTHO05D006816 1.3e-10 72.4 301 24.9
Os07g0116300 Oryza sativa ssp. japonica HOM05D005161 ORTHO05D006816 2.2e-10 71.6 439 22.3
Os06g0121200 Oryza sativa ssp. japonica HOM05D005161 ORTHO05D020953 8.3e-10 69.7 514 23.9
TAR371G0238 Trochodendron aralioides HOM05D000432 ORTHO05D000320 8.3e-10 69.7 652 21.6
Os06g0122200 Oryza sativa ssp. japonica HOM05D005161 ORTHO05D020953 1.9e-09 68.6 478 22.2
Os07g0222200 Oryza sativa ssp. japonica HOM05D005161 ORTHO05D299467 1.9e-09 68.6 383 25.1
QL05p003685 Quercus lobata HOM05D000432 ORTHO05D000320 1.9e-09 68.6 554 20.2
Lj4C9T6 Lonicera japonica HOM05D000432 ORTHO05D000320 5.4e-09 67.0 374 22.5
Nn5g27715 Nelumbo nucifera HOM05D000432 ORTHO05D000320 2.1e-08 65.1 573 22.0
QL05p075122 Quercus lobata HOM05D005161 ORTHO05D006816 3.5e-08 64.3 125 36.8
FvH4_6g34780 Fragaria vesca HOM05D000432 ORTHO05D000320 6.0e-08 63.5 324 24.1
SEGI_18601 Sequoiadendron giganteum HOM05D000432 ORTHO05D000320 7.8e-08 63.2 433 23.1
Eucgr.J02347 Eucalyptus grandis HOM05D000432 ORTHO05D000320 1.3e-07 62.4 585 21.7
Os11g0618500 Oryza sativa ssp. japonica HOM05D005161 ORTHO05D006816 1.3e-07 62.4 278 25.9
Os11g0618850 Oryza sativa ssp. japonica HOM05D005161 ORTHO05D006816 1.3e-07 62.4 292 25.0
CANSAT80G0338 Cannabis sativa HOM05D000432 ORTHO05D000320 1.7e-07 62.0 605 22.5
Eucgr.F02459 Eucalyptus grandis HOM05D000432 ORTHO05D000320 1.7e-07 62.0 632 20.7
CSS0017354 Camellia sinensis var. sinensis HOM05D000432 ORTHO05D000320 3.9e-07 60.8 541 21.1
CANSAT80G1474 Cannabis sativa HOM05D000432 ORTHO05D000320 8.6e-07 59.7 642 22.1
Rhsim10G0143000 Rhododendron simsii HOM05D000432 ORTHO05D000320 1.5e-06 58.9 487 21.4
arahy.Tifrunner.gnm1.ann1.D9Q7RX Arachis hypogaea HOM05D000432 ORTHO05D000320 1.9e-06 58.5 633 20.2
Sc15g0004340 Simmondsia chinensis HOM05D000432 ORTHO05D000320 1.9e-06 58.5 367 22.9
TAR623G1425 Trochodendron aralioides HOM05D000432 ORTHO05D000320 2.5e-06 58.2 617 21.9
Os07g0115720 Oryza sativa ssp. japonica HOM05D005161 ORTHO05D006816 3.3e-06 57.8 65 43.1
Prupe.3G041600 Prunus persica HOM05D000432 ORTHO05D000320 4.3e-06 57.4 652 21.8
Solyc12g094650.3 Solanum lycopersicum HOM05D000432 ORTHO05D000320 4.3e-06 57.4 663 22.8
QL05p004286 Quercus lobata HOM05D000432 ORTHO05D000320 5.6e-06 57.0 436 23.4
arahy.Tifrunner.gnm1.ann1.15ZADL Arachis hypogaea HOM05D000432 ORTHO05D000320 9.6e-06 56.2 616 20.5
arahy.Tifrunner.gnm1.ann1.5AK9GB Arachis hypogaea HOM05D000432 ORTHO05D000320 9.6e-06 56.2 622 19.5


User provided reference genes

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