Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.D01101 Eucalyptus grandis HOM05D007669 ORTHO05D009624 1.6e-132 476.1 237 100.0
Eucgr.D01099 Eucalyptus grandis HOM05D007669 ORTHO05D009624 1.3e-107 393.3 210 92.9
Eucgr.D01111 Eucalyptus grandis HOM05D007669 ORTHO05D009624 2.2e-70 269.6 205 71.2
PGR044G0001 Punica granatum HOM05D007669 ORTHO05D009624 1.7e-54 216.9 196 56.1
QL11p009976 Quercus lobata HOM05D007669 ORTHO05D009624 8.0e-52 208.0 201 54.7
Cfa013482 Carpinus fangiana HOM05D007669 ORTHO05D009624 3.0e-51 206.1 202 54.5
Oeu025206.1 Olea europaea HOM05D007669 ORTHO05D009624 2.0e-50 203.4 211 50.2
CiPaw.08G030700 Carya illinoinensis HOM05D007669 ORTHO05D009624 7.5e-50 201.4 200 54.0
VMungo1215G2771 Vigna mungo HOM05D007669 ORTHO05D009624 3.5e-47 192.6 206 48.1
Glyma.17G056500 Glycine max HOM05D007669 ORTHO05D009624 7.8e-47 191.4 198 49.5
Dinv25484 Davidia involucrata HOM05D007669 ORTHO05D009624 1.0e-46 191.0 209 53.6
arahy.Tifrunner.gnm1.ann1.YI9GDS Arachis hypogaea HOM05D007669 ORTHO05D009624 2.9e-46 189.5 198 48.5
arahy.Tifrunner.gnm1.ann1.BQQL35 Arachis hypogaea HOM05D007669 ORTHO05D009624 6.6e-46 188.3 198 48.0
Ca_21270_v3 Cicer arietinum L. HOM05D007669 ORTHO05D009624 1.5e-45 187.2 198 48.0
Cpa.g.sc115.51 Carica papaya HOM05D007669 ORTHO05D009624 1.9e-45 186.8 209 46.9
MD13G1236300 Malus domestica HOM05D007669 ORTHO05D009624 1.9e-45 186.8 202 48.0
Manes.14G174400 Manihot esculenta HOM05D007669 ORTHO05D009624 2.5e-45 186.4 202 46.5
Hma1.2p1_0726F.1_g208990 Hydrangea macrophylla HOM05D007669 ORTHO05D009624 5.6e-45 185.3 209 52.6
Lj4g0015120 Lotus japonicus HOM05D007669 ORTHO05D009624 5.6e-45 185.3 198 48.5
Psat4g013920 Pisum sativum HOM05D007669 ORTHO05D009624 5.6e-45 185.3 198 48.5
TPR.G5403 Trifolium pratense HOM05D007669 ORTHO05D009624 9.5e-45 184.5 198 47.5
Phvul.003G138500 Phaseolus vulgaris HOM05D007669 ORTHO05D009624 1.2e-44 184.1 198 48.0
TWI34G1867 Tripterygium wilfordii HOM05D007669 ORTHO05D009624 1.6e-44 183.7 199 49.7
ClCG06G013870 Citrullus lanatus HOM05D007669 ORTHO05D009624 1.0e-43 181.0 207 44.9
Ciclev10007518m.g Citrus clementina HOM05D007669 ORTHO05D009624 3.1e-43 179.5 198 47.0
FvH4_4g06530 Fragaria vesca HOM05D007669 ORTHO05D009624 6.8e-43 178.3 201 48.3
RcHm_v2.0_Chr4g0398451 Rosa chinensis HOM05D007669 ORTHO05D009624 6.8e-43 178.3 201 48.3
Prupe.1G068100 Prunus persica HOM05D007669 ORTHO05D009624 1.2e-42 177.6 202 45.0
MELO3C017409.2 Cucumis melo HOM05D007669 ORTHO05D009624 3.4e-42 176.0 210 42.9
FAN22G2123 Fragaria x ananassa HOM05D007669 ORTHO05D009624 5.8e-42 175.3 201 47.3
Lj2g0020468 Lotus japonicus HOM05D007669 ORTHO05D009624 7.5e-42 174.9 198 46.5
Medtr4g126780 Medicago truncatula HOM05D007669 ORTHO05D009624 1.3e-41 174.1 198 46.5
Sabra18G0113000 Salix brachista HOM05D007669 ORTHO05D009624 1.3e-41 174.1 206 46.6
Potri.018G133300 Populus trichocarpa HOM05D007669 ORTHO05D009624 2.2e-41 173.3 211 46.9
CsaV3_1G032070 Cucumis sativus L. HOM05D007669 ORTHO05D009624 2.9e-41 172.9 210 42.9
FAN07G2841 Fragaria x ananassa HOM05D007669 ORTHO05D009624 2.9e-41 172.9 201 46.8
Rhsim01G0007900 Rhododendron simsii HOM05D007669 ORTHO05D009624 4.9e-41 172.2 199 49.2
FAN17G0559 Fragaria x ananassa HOM05D007669 ORTHO05D009624 6.4e-41 171.8 200 49.0
GSVIVG01029262001 Vitis vinifera HOM05D007669 ORTHO05D009624 1.1e-40 171.0 199 48.7
PSO170G1866 Papaver somniferum HOM05D007669 ORTHO05D009624 3.2e-40 169.5 225 44.4
Lalb_Chr07g0180781 Lupinus albus HOM05D007669 ORTHO05D009624 7.0e-40 168.3 198 44.4
PSO063G2993 Papaver somniferum HOM05D007669 ORTHO05D009624 9.2e-40 167.9 225 43.6
Sed0018351 Sechium edule HOM05D007669 ORTHO05D009624 9.2e-40 167.9 212 42.5
vmacro13101 Vaccinium macrocarpon HOM05D007669 ORTHO05D009624 1.6e-39 167.2 212 48.1
Hund06703 Selenicereus undatus HOM05D007669 ORTHO05D009624 2.7e-39 166.4 200 46.5
CANSAT11G2077 Cannabis sativa HOM05D007669 ORTHO05D009624 1.0e-38 164.5 207 47.3
Gorai.009G262500 Gossypium raimondii HOM05D007669 ORTHO05D009624 3.9e-38 162.5 199 44.7
EL10Ac8g19326 Beta vulgaris HOM05D007669 ORTHO05D009624 8.6e-38 161.4 207 41.5
Gohir.A05G248100 Gossypium hirsutum HOM05D007669 ORTHO05D009624 1.1e-37 161.0 199 44.7
Cc06_g12900 Coffea canephora HOM05D007669 ORTHO05D009624 1.5e-37 160.6 198 45.5
Gohir.D05G246300 Gossypium hirsutum HOM05D007669 ORTHO05D009624 1.5e-37 160.6 199 44.2
Duzib177G0349 Durio zibethinus HOM05D007669 ORTHO05D009624 3.3e-37 159.5 199 43.7
SalBow1G4073 Salvia bowleyana HOM05D007669 ORTHO05D009624 4.3e-37 159.1 211 41.2
Aqoxy7G02932 Aquilegia oxysepala HOM05D007669 ORTHO05D009624 2.8e-36 156.4 218 42.7
Nn8g40420 Nelumbo nucifera HOM05D007669 ORTHO05D009624 3.6e-36 156.0 214 42.1
HanXRQChr09g0244441 Helianthus annuus HOM05D007669 ORTHO05D009624 6.2e-36 155.2 202 43.6
AUR62031310 Chenopodium quinoa HOM05D007669 ORTHO05D009624 6.8e-35 151.8 198 40.9
Ah.09g232160 Amaranthus hybridus HOM05D007669 ORTHO05D009624 4.4e-34 149.1 199 39.7
ATR0580G240 Amborella trichopoda HOM05D007669 ORTHO05D009624 9.8e-34 147.9 220 40.0
Lsat_1_v5_gn_7_54021 Lactuca sativa HOM05D007669 ORTHO05D009624 9.8e-34 147.9 198 44.4
SGA_v2.0_scaffold17G07944 Striga asiatica HOM05D007669 ORTHO05D009624 1.7e-33 147.1 199 42.2
MBI16_g09333_MAGBIO Magnolia biondii HOM05D007669 ORTHO05D009624 4.9e-33 145.6 204 41.7
Migut.K00227 Erythranthe guttata HOM05D007669 ORTHO05D009624 6.4e-33 145.2 199 40.7
AUR62027394 Chenopodium quinoa HOM05D007669 ORTHO05D009624 2.3e-30 136.7 173 39.9
Glyma.13G102601 Glycine max HOM05D007669 ORTHO05D009624 1.1e-27 127.9 130 49.2
Zm00001eb432590 Zea mays HOM05D007669 ORTHO05D009624 8.9e-27 124.8 217 36.4
SEGI_05703 Sequoiadendron giganteum HOM05D007669 ORTHO05D009624 4.6e-23 112.5 211 34.1
Sc13g0008100 Simmondsia chinensis HOM05D007669 ORTHO05D009624 6.0e-23 112.1 196 36.2
SEGI_13081 Sequoiadendron giganteum HOM05D007669 ORTHO05D009624 1.9e-21 107.1 194 34.0
HPP92_010780 Vanilla planifolia HOM05D007669 ORTHO05D009624 9.6e-21 104.8 163 38.7
ECA240G0205 Erigeron canadensis HOM05D007669 ORTHO05D009624 3.8e-17 92.8 102 52.9
SMO356G0293 Selaginella moellendorffii HOM05D007669 ORTHO05D009624 2.1e-15 87.0 177 32.2
CDE02G1706 Ceratophyllum demersum HOM05D007669 ORTHO05D009624 7.8e-15 85.1 135 36.3
Eucgr.L01386 Eucalyptus grandis HOM05D007669 ORTHO05D009624 3.9e-14 82.8 77 62.3
AagrBONN_evm.TU.Sc2ySwM_117.3295 Anthoceros agrestis HOM05D007669 ORTHO05D009624 1.5e-13 80.9 166 32.5
Pp3c9_5530 Physcomitrium patens HOM05D007669 ORTHO05D009624 3.6e-12 76.3 165 31.5
Psat7g062600 Pisum sativum HOM05D007669 ORTHO05D009624 4.8e-12 75.9 78 48.7
DCAR_017992 Daucus carota HOM05D007669 ORTHO05D009624 2.0e-10 70.5 45 66.7
Mapoly0147s0035 Marchantia polymorpha HOM05D007669 ORTHO05D009624 4.9e-09 65.9 176 28.4


User provided reference genes

Program Settings