Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.D01099 Eucalyptus grandis HOM05D007669 ORTHO05D009624 0.0e+00 1091.6 536 100.0
Eucgr.L01386 Eucalyptus grandis HOM05D007669 ORTHO05D009624 4.6e-188 661.8 403 82.9
Eucgr.D01111 Eucalyptus grandis HOM05D007669 ORTHO05D009624 3.9e-179 632.1 536 65.1
PGR044G0001 Punica granatum HOM05D007669 ORTHO05D009624 8.1e-161 571.2 519 57.2
Dinv25484 Davidia involucrata HOM05D007669 ORTHO05D009624 2.8e-145 519.6 535 51.8
Cfa013482 Carpinus fangiana HOM05D007669 ORTHO05D009624 8.2e-145 518.1 523 51.6
QL11p009976 Quercus lobata HOM05D007669 ORTHO05D009624 1.0e-142 511.1 522 51.7
RcHm_v2.0_Chr4g0398451 Rosa chinensis HOM05D007669 ORTHO05D009624 6.5e-142 508.4 526 50.4
MD13G1236300 Malus domestica HOM05D007669 ORTHO05D009624 5.5e-141 505.4 527 49.7
Prupe.1G068100 Prunus persica HOM05D007669 ORTHO05D009624 4.6e-140 502.3 527 49.9
Ciclev10007518m.g Citrus clementina HOM05D007669 ORTHO05D009624 2.6e-138 496.5 521 48.6
Manes.14G174400 Manihot esculenta HOM05D007669 ORTHO05D009624 9.7e-138 494.6 525 48.2
FvH4_4g06530 Fragaria vesca HOM05D007669 ORTHO05D009624 1.7e-137 493.8 525 49.0
TWI34G1867 Tripterygium wilfordii HOM05D007669 ORTHO05D009624 5.3e-136 488.8 529 48.8
FAN17G0559 Fragaria x ananassa HOM05D007669 ORTHO05D009624 9.1e-136 488.0 525 48.8
FAN22G2123 Fragaria x ananassa HOM05D007669 ORTHO05D009624 1.5e-135 487.3 525 48.6
GSVIVG01029262001 Vitis vinifera HOM05D007669 ORTHO05D009624 1.0e-134 484.6 524 50.8
FAN07G2841 Fragaria x ananassa HOM05D007669 ORTHO05D009624 2.9e-134 483.0 525 48.2
Gorai.009G262500 Gossypium raimondii HOM05D007669 ORTHO05D009624 2.9e-134 483.0 524 48.5
Oeu025206.1 Olea europaea HOM05D007669 ORTHO05D009624 6.5e-134 481.9 537 47.9
Gohir.D05G246300 Gossypium hirsutum HOM05D007669 ORTHO05D009624 1.1e-133 481.1 524 48.5
Potri.018G133300 Populus trichocarpa HOM05D007669 ORTHO05D009624 3.2e-133 479.6 539 48.1
Gohir.A05G248100 Gossypium hirsutum HOM05D007669 ORTHO05D009624 5.5e-133 478.8 528 48.9
arahy.Tifrunner.gnm1.ann1.BQQL35 Arachis hypogaea HOM05D007669 ORTHO05D009624 2.7e-132 476.5 524 48.3
arahy.Tifrunner.gnm1.ann1.YI9GDS Arachis hypogaea HOM05D007669 ORTHO05D009624 4.7e-132 475.7 527 48.0
Phvul.003G138500 Phaseolus vulgaris HOM05D007669 ORTHO05D009624 6.1e-132 475.3 523 48.6
TPR.G5403 Trifolium pratense HOM05D007669 ORTHO05D009624 1.8e-131 473.8 530 47.7
Sabra18G0113000 Salix brachista HOM05D007669 ORTHO05D009624 2.6e-130 469.9 536 46.8
Rhsim01G0007900 Rhododendron simsii HOM05D007669 ORTHO05D009624 9.7e-130 468.0 525 49.0
Lj4g0015120 Lotus japonicus HOM05D007669 ORTHO05D009624 1.3e-129 467.6 524 48.1
Medtr4g126780 Medicago truncatula HOM05D007669 ORTHO05D009624 8.2e-129 464.9 523 47.4
Lalb_Chr07g0180781 Lupinus albus HOM05D007669 ORTHO05D009624 1.4e-128 464.2 519 47.8
Sed0018351 Sechium edule HOM05D007669 ORTHO05D009624 2.4e-128 463.4 533 47.3
CANSAT11G2077 Cannabis sativa HOM05D007669 ORTHO05D009624 1.3e-126 457.6 531 48.4
ClCG06G013870 Citrullus lanatus HOM05D007669 ORTHO05D009624 3.8e-126 456.1 530 46.2
Duzib177G0349 Durio zibethinus HOM05D007669 ORTHO05D009624 9.4e-125 451.4 489 48.7
Cc06_g12900 Coffea canephora HOM05D007669 ORTHO05D009624 1.2e-124 451.1 526 47.9
Ca_21270_v3 Cicer arietinum L. HOM05D007669 ORTHO05D009624 1.4e-123 447.6 588 42.7
Ah.09g232160 Amaranthus hybridus HOM05D007669 ORTHO05D009624 9.7e-122 441.4 522 45.8
PSO170G1866 Papaver somniferum HOM05D007669 ORTHO05D009624 1.7e-121 440.7 535 46.5
SalBow1G4073 Salvia bowleyana HOM05D007669 ORTHO05D009624 2.8e-121 439.9 544 44.7
Aqoxy7G02932 Aquilegia oxysepala HOM05D007669 ORTHO05D009624 6.3e-121 438.7 561 45.5
PSO063G2993 Papaver somniferum HOM05D007669 ORTHO05D009624 7.0e-120 435.3 535 46.0
Nn8g40420 Nelumbo nucifera HOM05D007669 ORTHO05D009624 1.2e-119 434.5 542 44.8
HanXRQChr09g0244441 Helianthus annuus HOM05D007669 ORTHO05D009624 3.5e-119 433.0 528 44.7
Hund06703 Selenicereus undatus HOM05D007669 ORTHO05D009624 2.2e-118 430.3 523 46.1
EL10Ac8g19326 Beta vulgaris HOM05D007669 ORTHO05D009624 1.9e-117 427.2 529 43.1
Migut.K00227 Erythranthe guttata HOM05D007669 ORTHO05D009624 1.3e-113 414.5 528 43.8
Lj2g0020468 Lotus japonicus HOM05D007669 ORTHO05D009624 3.1e-112 409.8 523 44.4
Cpa.g.sc115.51 Carica papaya HOM05D007669 ORTHO05D009624 1.2e-111 407.9 467 46.7
AUR62031310 Chenopodium quinoa HOM05D007669 ORTHO05D009624 1.6e-111 407.5 522 43.1
SGA_v2.0_scaffold17G07944 Striga asiatica HOM05D007669 ORTHO05D009624 3.5e-111 406.4 525 43.2
ATR0580G240 Amborella trichopoda HOM05D007669 ORTHO05D009624 2.1e-108 397.1 555 42.3
Eucgr.D01101 Eucalyptus grandis HOM05D007669 ORTHO05D009624 2.3e-107 393.7 210 92.9
Lsat_1_v5_gn_7_54021 Lactuca sativa HOM05D007669 ORTHO05D009624 2.4e-104 383.6 494 43.9
vmacro13101 Vaccinium macrocarpon HOM05D007669 ORTHO05D009624 4.5e-103 379.4 538 41.6
VMungo1215G2771 Vigna mungo HOM05D007669 ORTHO05D009624 6.6e-102 375.6 699 34.6
HPP92_010780 Vanilla planifolia HOM05D007669 ORTHO05D009624 3.3e-101 373.2 494 43.3
MELO3C017409.2 Cucumis melo HOM05D007669 ORTHO05D009624 1.8e-99 367.5 492 42.5
CiPaw.08G030700 Carya illinoinensis HOM05D007669 ORTHO05D009624 8.9e-99 365.2 323 57.3
Sc13g0008100 Simmondsia chinensis HOM05D007669 ORTHO05D009624 2.6e-98 363.6 524 40.3
ECA240G0205 Erigeron canadensis HOM05D007669 ORTHO05D009624 3.4e-98 363.2 429 47.1
Zm00001eb432590 Zea mays HOM05D007669 ORTHO05D009624 1.2e-95 354.8 552 40.8
Glyma.17G056500 Glycine max HOM05D007669 ORTHO05D009624 4.6e-95 352.8 321 54.5
AUR62027394 Chenopodium quinoa HOM05D007669 ORTHO05D009624 1.1e-93 348.2 434 43.1
Psat4g013920 Pisum sativum HOM05D007669 ORTHO05D009624 5.2e-91 339.3 320 53.8
Hma1.2p1_0726F.1_g208990 Hydrangea macrophylla HOM05D007669 ORTHO05D009624 3.2e-88 330.1 335 54.6
CsaV3_1G032070 Cucumis sativus L. HOM05D007669 ORTHO05D009624 9.5e-85 318.5 333 48.9
Glyma.13G102601 Glycine max HOM05D007669 ORTHO05D009624 4.7e-84 316.2 456 41.9
SEGI_13081 Sequoiadendron giganteum HOM05D007669 ORTHO05D009624 8.9e-83 312.0 604 34.6
MBI16_g09333_MAGBIO Magnolia biondii HOM05D007669 ORTHO05D009624 3.3e-77 293.5 334 49.1
CDE02G1706 Ceratophyllum demersum HOM05D007669 ORTHO05D009624 1.8e-67 261.2 465 37.8
AagrBONN_evm.TU.Sc2ySwM_117.3295 Anthoceros agrestis HOM05D007669 ORTHO05D009624 1.1e-64 251.9 525 34.1
Pp3c9_5530 Physcomitrium patens HOM05D007669 ORTHO05D009624 4.3e-61 240.0 502 33.1
SEGI_05703 Sequoiadendron giganteum HOM05D007669 ORTHO05D009624 2.4e-59 234.2 301 43.5
SMO356G0293 Selaginella moellendorffii HOM05D007669 ORTHO05D009624 4.0e-59 233.4 413 37.5
FAN12G2799 Fragaria x ananassa HOM05D007669 ORTHO05D009624 3.0e-54 217.2 251 44.2
DCAR_017992 Daucus carota HOM05D007669 ORTHO05D009624 3.3e-53 213.8 167 61.7
Mapoly0147s0035 Marchantia polymorpha HOM05D007669 ORTHO05D009624 1.3e-52 211.8 621 27.9
Haze_22064 Corylus avellana HOM05D007669 ORTHO05D009624 7.4e-37 159.5 200 43.0
Psat7g062600 Pisum sativum HOM05D007669 ORTHO05D009624 2.8e-36 157.5 139 54.0
COL.COLO4_25058 Corchorus olitorius HOM05D007669 ORTHO05D009624 3.0e-30 137.5 166 42.8
DCAR_017991 Daucus carota HOM05D007669 ORTHO05D009624 3.6e-23 114.0 203 33.5
MCO10G383 Micromonas commoda HOM05D024043 ORTHO05D009624 3.3e-13 80.9 129 38.8
Mapoly0004s0046 Marchantia polymorpha HOM05D024043 ORTHO05D031244 1.3e-12 79.0 126 37.3
Psat4g139360 Pisum sativum HOM05D007669 ORTHO05D009624 1.7e-12 78.6 138 34.8
Pp3c25_1540 Physcomitrium patens HOM05D024043 ORTHO05D031244 6.3e-12 76.6 145 32.4
PRCOL_00001814 Prasinoderma coloniale HOM05D007669 ORTHO05D009624 7.0e-11 73.2 141 33.3
Cre07.g356600 Chlamydomonas reinhardtii HOM05D007669 ORTHO05D009624 4.5e-10 70.5 128 35.9
PRCOL_00006584 Prasinoderma coloniale HOM05D024043 ORTHO05D009624 8.5e-09 66.2 142 33.1
AagrBONN_evm.TU.Sc2ySwM_369.230 Anthoceros agrestis HOM05D024043 ORTHO05D031244 4.2e-08 63.9 110 30.9


User provided reference genes

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