Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.D01080 Eucalyptus grandis HOM05D006927 ORTHO05D009065 1.1e-177 626.7 362 100.0
GSVIVG01019324001 Vitis vinifera HOM05D006927 ORTHO05D009065 7.2e-137 491.1 283 79.5
PGR083G0610 Punica granatum HOM05D006927 ORTHO05D009065 8.8e-135 484.2 286 78.3
QL04p053394 Quercus lobata HOM05D006927 ORTHO05D009065 2.6e-134 482.6 280 81.8
Dinv43961 Davidia involucrata HOM05D006927 ORTHO05D009065 5.7e-134 481.5 281 80.1
Manes.09G133500 Manihot esculenta HOM05D006927 ORTHO05D009065 3.7e-133 478.8 283 78.4
Prupe.2G106800 Prunus persica HOM05D006927 ORTHO05D009065 4.9e-133 478.4 279 78.9
FAN03G0521 Fragaria x ananassa HOM05D006927 ORTHO05D009065 8.3e-133 477.6 281 78.3
Potri.013G070700 Populus trichocarpa HOM05D006927 ORTHO05D009065 1.1e-132 477.2 281 78.6
FvH4_7g08340 Fragaria vesca HOM05D006927 ORTHO05D009065 4.1e-132 475.3 281 77.6
RcHm_v2.0_Chr1g0340711 Rosa chinensis HOM05D006927 ORTHO05D009065 1.2e-131 473.8 281 77.6
Duzib177G0162 Durio zibethinus HOM05D006927 ORTHO05D009065 4.5e-131 471.9 281 77.6
Thecc.05G234500 Theobroma cacao HOM05D006927 ORTHO05D009065 4.5e-131 471.9 281 77.9
Gorai.007G250200 Gossypium raimondii HOM05D006927 ORTHO05D009065 7.8e-131 471.1 281 76.9
Cpa.g.sc73.27 Carica papaya HOM05D006927 ORTHO05D009065 1.7e-130 469.9 280 77.5
FAN10G1940 Fragaria x ananassa HOM05D006927 ORTHO05D009065 5.0e-130 468.4 289 75.4
CSS0044270 Camellia sinensis var. sinensis HOM05D006927 ORTHO05D009065 4.3e-129 465.3 279 77.1
Gohir.A11G224222 Gossypium hirsutum HOM05D006927 ORTHO05D009065 4.3e-129 465.3 281 76.2
Ciclev10032190m.g Citrus clementina HOM05D006927 ORTHO05D009065 5.6e-129 464.9 281 76.9
FAN06G3009 Fragaria x ananassa HOM05D006927 ORTHO05D009065 2.8e-128 462.6 299 72.6
Lsat_1_v5_gn_1_89341 Lactuca sativa HOM05D006927 ORTHO05D009065 2.8e-128 462.6 281 77.9
CSS0031880 Camellia sinensis var. sinensis HOM05D006927 ORTHO05D009065 3.6e-128 462.2 279 76.7
TAR629G3441 Trochodendron aralioides HOM05D006927 ORTHO05D009065 3.6e-128 462.2 277 76.9
Haze_15787 Corylus avellana HOM05D006927 ORTHO05D009065 8.0e-128 461.1 282 78.7
DCAR_001906 Daucus carota HOM05D006927 ORTHO05D009065 4.0e-127 458.8 280 76.4
MD07G1081500 Malus domestica HOM05D006927 ORTHO05D009065 4.0e-127 458.8 285 75.1
Aqoxy1G00986 Aquilegia oxysepala HOM05D006927 ORTHO05D009065 4.4e-126 455.3 300 71.7
Rhsim07G0047700 Rhododendron simsii HOM05D006927 ORTHO05D009065 5.7e-126 454.9 302 72.8
Cc02_g26470 Coffea canephora HOM05D006927 ORTHO05D009065 1.3e-125 453.8 281 75.4
TWI34G1327 Tripterygium wilfordii HOM05D006927 ORTHO05D009065 8.3e-125 451.1 279 74.2
ECA248G1152 Erigeron canadensis HOM05D006927 ORTHO05D009065 1.1e-124 450.7 277 74.4
Atru.chr2.1634 Acer truncatum HOM05D006927 ORTHO05D009065 1.4e-124 450.3 307 70.4
CsaV3_6G006390 Cucumis sativus L. HOM05D006927 ORTHO05D009065 1.4e-124 450.3 282 73.8
THA.LOC104820815 Tarenaya hassleriana HOM05D006927 ORTHO05D009065 2.4e-124 449.5 281 74.4
MELO3C022480.2 Cucumis melo HOM05D006927 ORTHO05D009065 3.2e-124 449.1 282 73.8
Lj1g0006598 Lotus japonicus HOM05D006927 ORTHO05D009065 3.2e-124 449.1 282 75.2
Nitab4.5_0006785g0060 Nicotiana tabacum HOM05D006927 ORTHO05D009065 4.1e-124 448.7 283 76.0
Solyc01g081480.3 Solanum lycopersicum HOM05D006927 ORTHO05D009065 4.1e-124 448.7 282 74.8
Sopen01g033040 Solanum pennellii HOM05D006927 ORTHO05D009065 5.4e-124 448.4 282 74.8
A02p04400 Brassica napus HOM05D006927 ORTHO05D009065 1.2e-123 447.2 285 73.7
HanXRQChr01g0018481 Helianthus annuus HOM05D006927 ORTHO05D009065 1.2e-123 447.2 285 73.7
SalBow5G1207 Salvia bowleyana HOM05D006927 ORTHO05D009065 1.6e-123 446.8 281 74.4
AT5G17670 Arabidopsis thaliana HOM05D006927 ORTHO05D009065 2.0e-123 446.4 281 75.1
Lj9A617T58 Lonicera japonica HOM05D006927 ORTHO05D009065 2.0e-123 446.4 272 77.6
PGSC0003DMG400031110 Solanum tuberosum HOM05D006927 ORTHO05D009065 2.0e-123 446.4 282 74.5
BcaC03g13532 Brassica carinata HOM05D006927 ORTHO05D009065 3.5e-123 445.7 279 73.8
Thhalv10014137m.g Eutrema salsugineum HOM05D006927 ORTHO05D009065 4.6e-123 445.3 283 74.6
AL6G28760 Arabidopsis lyrata HOM05D006927 ORTHO05D009065 5.9e-123 444.9 281 74.4
Peaxi162Scf00907g00025 Petunia axillaris HOM05D006927 ORTHO05D009065 2.3e-122 443.0 283 73.9
CAN.G992.25 Capsicum annuum HOM05D006927 ORTHO05D009065 3.9e-122 442.2 283 73.5
Sp6g26550 Schrenkiella parvula HOM05D006927 ORTHO05D009065 3.9e-122 442.2 283 73.1
C02p09230 Brassica napus HOM05D006927 ORTHO05D009065 3.3e-121 439.1 283 72.8
Sc11g0005590 Simmondsia chinensis HOM05D006927 ORTHO05D009065 5.6e-121 438.3 282 72.0
Nitab4.5_0000792g0130 Nicotiana tabacum HOM05D006927 ORTHO05D009065 7.3e-121 438.0 281 74.0
Carub.0006s1591 Capsella rubella HOM05D006927 ORTHO05D009065 9.5e-121 437.6 283 72.8
VMungo0251G3349 Vigna mungo HOM05D006927 ORTHO05D009065 2.1e-120 436.4 283 73.1
Migut.B01420 Erythranthe guttata HOM05D006927 ORTHO05D009065 2.8e-120 436.0 281 71.9
MBI04_g06278_MAGBIO Magnolia biondii HOM05D006927 ORTHO05D009065 2.8e-120 436.0 275 73.8
Sed0018978 Sechium edule HOM05D006927 ORTHO05D009065 1.8e-119 433.3 283 70.7
Ah.16g104050 Amaranthus hybridus HOM05D006927 ORTHO05D009065 6.8e-119 431.4 279 73.1
Os02g0129900 Oryza sativa ssp. japonica HOM05D006927 ORTHO05D009065 2.9e-117 426.0 283 71.7
vmacro13598 Vaccinium macrocarpon HOM05D006927 ORTHO05D009065 2.4e-116 422.9 384 56.8
Zm00001eb208940 Zea mays HOM05D006927 ORTHO05D009065 3.2e-116 422.5 291 69.8
Medtr3g118320 Medicago truncatula HOM05D006927 ORTHO05D009065 1.2e-115 420.6 283 70.0
ATR0568G108 Amborella trichopoda HOM05D006927 ORTHO05D009065 2.0e-115 419.9 280 70.4
Glyma.06G001500 Glycine max HOM05D006927 ORTHO05D009065 2.0e-115 419.9 286 71.3
COL.COLO4_21417 Corchorus olitorius HOM05D006927 ORTHO05D009065 6.0e-115 418.3 274 73.4
ClCG06G000620 Citrullus lanatus HOM05D006927 ORTHO05D009065 1.3e-114 417.2 309 65.4
CANSAT25G2771 Cannabis sativa HOM05D006927 ORTHO05D009065 3.9e-114 415.6 279 69.9
TPR.G38566 Trifolium pratense HOM05D006927 ORTHO05D009065 1.1e-113 414.1 287 70.4
arahy.Tifrunner.gnm1.ann1.DTN3WJ Arachis hypogaea HOM05D006927 ORTHO05D009065 3.3e-113 412.5 285 70.5
Phvul.002G317100 Phaseolus vulgaris HOM05D006927 ORTHO05D009065 7.3e-113 411.4 286 68.2
Aa31LG11G11960 Aethionema arabicum HOM05D006927 ORTHO05D009065 2.8e-112 409.5 314 64.6
arahy.Tifrunner.gnm1.ann1.A7PVHI Arachis hypogaea HOM05D006927 ORTHO05D009065 2.8e-112 409.5 283 70.3
PSO675G5316 Papaver somniferum HOM05D006927 ORTHO05D009065 6.8e-111 404.8 298 66.8
Ca_15418_v3 Cicer arietinum L. HOM05D006927 ORTHO05D009065 2.9e-109 399.4 273 70.7
SGA_v2.0_scaffold98G29375 Striga asiatica HOM05D006927 ORTHO05D009065 5.4e-108 395.2 277 70.0
FAN01G0804 Fragaria x ananassa HOM05D006927 ORTHO05D009065 3.9e-106 389.0 275 68.4
CDE02G0279 Ceratophyllum demersum HOM05D006927 ORTHO05D009065 5.4e-100 368.6 283 62.2
MD02G1231900 Malus domestica HOM05D006927 ORTHO05D009065 7.8e-99 364.8 249 70.7
Sabra13G0061600 Salix brachista HOM05D006927 ORTHO05D009065 1.3e-98 364.0 319 58.9
AagrBONN_evm.TU.Sc2ySwM_228.4179 Anthoceros agrestis HOM05D006927 ORTHO05D009065 4.3e-97 359.0 293 57.3
Lalb_Chr08g0246751 Lupinus albus HOM05D006927 ORTHO05D009065 1.4e-95 354.0 285 59.6
Mapoly0110s0034 Marchantia polymorpha HOM05D006927 ORTHO05D009065 5.8e-94 348.6 288 59.0
Pp3c20_10810 Physcomitrium patens HOM05D006927 ORTHO05D009065 7.6e-94 348.2 294 55.4
SMO141G0137 Selaginella moellendorffii HOM05D006927 ORTHO05D009065 4.9e-85 318.9 275 54.9
Psat5g000960 Pisum sativum HOM05D006927 ORTHO05D009065 1.9e-84 317.0 222 70.3
Dinv43521 Davidia involucrata HOM05D006927 ORTHO05D009065 3.4e-78 296.2 165 82.4
Nn1g09344 Nelumbo nucifera HOM05D006927 ORTHO05D009065 2.9e-77 293.1 165 78.8
BraA02t05404Z Brassica rapa HOM05D006927 ORTHO05D009065 6.4e-77 292.0 162 82.7
BolC2t06832H Brassica oleracea HOM05D006927 ORTHO05D009065 1.4e-76 290.8 162 82.1
Oeu034881.1 Olea europaea HOM05D006927 ORTHO05D009065 2.4e-76 290.0 165 79.4
Actinidia31733 Actinidia chinensis HOM05D006927 ORTHO05D009065 6.7e-74 282.0 180 74.4
CiPaw.02G047300 Carya illinoinensis HOM05D006927 ORTHO05D009065 5.6e-73 278.9 162 79.6
Aqoxy116s007 Aquilegia oxysepala HOM05D006927 ORTHO05D009065 2.2e-69 266.9 270 53.3
MCO09G674 Micromonas commoda HOM05D006927 ORTHO05D009065 1.6e-67 260.8 279 44.8
Cre07.g313550 Chlamydomonas reinhardtii HOM05D006927 ORTHO05D009065 2.1e-67 260.4 286 44.1
HPP92_025548 Vanilla planifolia HOM05D006927 ORTHO05D009065 3.1e-63 246.5 179 64.2
PRCOL_00002784 Prasinoderma coloniale HOM05D006927 ORTHO05D009065 5.5e-60 235.7 290 43.4
CARHR195510 Cardamine hirsuta HOM05D006927 ORTHO05D009065 6.7e-58 228.8 162 68.5
Gohir.D11G237100 Gossypium hirsutum HOM05D006927 ORTHO05D009065 1.4e-52 211.1 117 81.2
unitig_26.g8847 Utricularia gibba HOM05D006927 ORTHO05D009065 2.6e-49 200.3 119 77.3
unitig_26.g8846 Utricularia gibba HOM05D006927 ORTHO05D009065 5.7e-33 146.0 79 75.9
MCO02G275 Micromonas commoda HOM05D006927 ORTHO05D044296 1.6e-30 137.9 323 31.3
PRCOL_00000683 Prasinoderma coloniale HOM05D006927 ORTHO05D009065 2.0e-30 137.5 276 34.8
Actinidia34774 Actinidia chinensis HOM05D006927 ORTHO05D009065 3.5e-30 136.7 81 72.8
Thecc.05G234900 Theobroma cacao HOM05D006927 ORTHO05D009065 7.2e-28 129.0 62 91.9
SEGI_38351 Sequoiadendron giganteum HOM05D006927 ORTHO05D009065 1.0e-26 125.2 78 70.5
Cre01.g025150 Chlamydomonas reinhardtii HOM05D006927 ORTHO05D044296 8.8e-26 122.1 332 28.0
BcaB08g36753 Brassica carinata HOM05D006927 ORTHO05D009065 1.0e-21 108.6 134 44.8
HPP92_025520 Vanilla planifolia HOM05D006927 ORTHO05D009065 1.8e-18 97.8 156 41.0
AagrBONN_evm.TU.Sc2ySwM_368.1936 Anthoceros agrestis HOM05D006927 ORTHO05D071668 1.6e-14 84.7 235 27.2
PRCOL_00002844 Prasinoderma coloniale HOM05D006927 ORTHO05D049054 1.7e-13 81.3 131 38.9
CBR_g4745 Chara braunii HOM05D000019 ORTHO05D000002 1.8e-10 71.2 68 44.1
C09p59490 Brassica napus HOM05D000005 ORTHO05D040849 2.4e-07 60.8 168 29.2


User provided reference genes

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