Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.D01076 Eucalyptus grandis HOM05D000294 ORTHO05D000177 1.2e-103 379.8 179 100.0
Potri.013G078500 Populus trichocarpa HOM05D000294 ORTHO05D000177 1.4e-11 73.9 162 28.4
Os01g0518000 Oryza sativa ssp. japonica HOM05D000294 ORTHO05D000177 2.3e-11 73.2 159 30.2
CAN.G298.19 Capsicum annuum HOM05D000294 ORTHO05D000177 3.0e-11 72.8 164 28.0
BcaC06g34355 Brassica carinata HOM05D000294 ORTHO05D000177 4.0e-11 72.4 171 30.4
A09p22500 Brassica napus HOM05D000294 ORTHO05D000177 4.0e-11 72.4 154 29.9
BraA09t37852Z Brassica rapa HOM05D000294 ORTHO05D000177 4.0e-11 72.4 154 29.9
Aa31LG9G6170 Aethionema arabicum HOM05D000294 ORTHO05D000177 5.2e-11 72.0 151 27.8
CAN.G474.6 Capsicum annuum HOM05D000294 ORTHO05D000177 6.8e-11 71.6 166 26.5
Sopen08g001120 Solanum pennellii HOM05D000294 ORTHO05D000177 1.2e-10 70.9 163 28.2
PGSC0003DMG400017518 Solanum tuberosum HOM05D000294 ORTHO05D000177 1.2e-10 70.9 165 27.3
C07p29990 Brassica napus HOM05D000294 ORTHO05D000177 2.0e-10 70.1 163 30.1
C09p28800 Brassica napus HOM05D000294 ORTHO05D000177 2.0e-10 70.1 162 28.4
BolC7t43541H Brassica oleracea HOM05D000294 ORTHO05D000177 2.0e-10 70.1 163 30.1
BolC9t55742H Brassica oleracea HOM05D000294 ORTHO05D000177 2.0e-10 70.1 162 28.4
Potri.001G141500 Populus trichocarpa HOM05D000294 ORTHO05D000177 2.6e-10 69.7 159 28.3
Peaxi162Scf00236g00013 Petunia axillaris HOM05D000294 ORTHO05D000177 3.4e-10 69.3 159 27.0
Potri.003G092800 Populus trichocarpa HOM05D000294 ORTHO05D000177 3.4e-10 69.3 159 27.7
BcaB07g30825 Brassica carinata HOM05D000294 ORTHO05D000177 4.4e-10 68.9 164 26.8
Thhalv10001013m.g Eutrema salsugineum HOM05D000294 ORTHO05D000177 4.4e-10 68.9 157 28.0
Solyc08g076860.3 Solanum lycopersicum HOM05D000294 ORTHO05D000177 4.4e-10 68.9 158 27.8
Sopen08g025390 Solanum pennellii HOM05D000294 ORTHO05D000177 4.4e-10 68.9 158 27.8
Cfa004239 Carpinus fangiana HOM05D000294 ORTHO05D000177 5.7e-10 68.6 149 24.8
Nitab4.5_0008743g0010 Nicotiana tabacum HOM05D000294 ORTHO05D000177 5.7e-10 68.6 166 26.5
BcaC06g31454 Brassica carinata HOM05D000294 ORTHO05D000177 7.5e-10 68.2 149 28.9
Peaxi162Scf00185g00039 Petunia axillaris HOM05D000294 ORTHO05D000177 7.5e-10 68.2 161 28.0
THA.LOC104827756 Tarenaya hassleriana HOM05D000294 ORTHO05D000177 7.5e-10 68.2 159 27.0
A06p45740 Brassica napus HOM05D000294 ORTHO05D000177 9.8e-10 67.8 148 29.1
BraA06t27444Z Brassica rapa HOM05D000294 ORTHO05D000177 1.3e-09 67.4 148 29.1
Solyc08g005100.3 Solanum lycopersicum HOM05D000294 ORTHO05D000177 1.3e-09 67.4 163 27.6
Sp2g11520 Schrenkiella parvula HOM05D000294 ORTHO05D000177 1.7e-09 67.0 164 27.4
SpUn0036_0090 Schrenkiella parvula HOM05D000294 ORTHO05D000177 1.7e-09 67.0 164 27.4
BcaC04g21689 Brassica carinata HOM05D000294 ORTHO05D000177 2.8e-09 66.2 150 26.7
Os01g0517800 Oryza sativa ssp. japonica HOM05D000294 ORTHO05D000177 3.7e-09 65.9 150 29.3
CiPaw.05G214400 Carya illinoinensis HOM05D000294 ORTHO05D000177 4.9e-09 65.5 163 26.4
Migut.E00943 Erythranthe guttata HOM05D000294 ORTHO05D000177 6.3e-09 65.1 165 26.1
Peaxi162Scf00045g00127 Petunia axillaris HOM05D000294 ORTHO05D000177 6.3e-09 65.1 158 28.5
MSTRG.12163 Avicennia marina HOM05D000294 ORTHO05D000177 8.3e-09 64.7 165 26.1
AL8G11640 Arabidopsis lyrata HOM05D000294 ORTHO05D000177 1.1e-08 64.3 156 27.6
BraA02t08039Z Brassica rapa HOM05D000294 ORTHO05D000177 1.1e-08 64.3 151 27.8
LjContig00222g0024611 Lotus japonicus HOM05D000294 ORTHO05D000177 1.1e-08 64.3 153 28.1
BcaC03g16873 Brassica carinata HOM05D000294 ORTHO05D000177 2.4e-08 63.2 147 27.2
C02p47750 Brassica napus HOM05D000294 ORTHO05D000177 2.4e-08 63.2 147 27.2
BolC2t10811H Brassica oleracea HOM05D000294 ORTHO05D000177 2.4e-08 63.2 147 27.2
Sabra13G0076800 Salix brachista HOM05D000294 ORTHO05D000177 2.4e-08 63.2 159 28.3
PGSC0003DMG400017849 Solanum tuberosum HOM05D000294 ORTHO05D000177 2.4e-08 63.2 157 27.4
SGA_v2.0_scaffold198G41094 Striga asiatica HOM05D000294 ORTHO05D000177 2.4e-08 63.2 170 26.5
THA.LOC104806714 Tarenaya hassleriana HOM05D000294 ORTHO05D000177 2.4e-08 63.2 166 26.5
BcaC03g16879 Brassica carinata HOM05D000294 ORTHO05D000177 3.1e-08 62.8 161 25.5
A02p30270 Brassica napus HOM05D000294 ORTHO05D000177 3.1e-08 62.8 162 25.3
BcaC05g27298 Brassica carinata HOM05D000294 ORTHO05D000177 4.1e-08 62.4 167 24.6
BcaNung06202 Brassica carinata HOM05D000294 ORTHO05D000177 4.1e-08 62.4 162 27.2
A01p09950 Brassica napus HOM05D000294 ORTHO05D000177 4.1e-08 62.4 172 26.2
unitig_744.g24310 Utricularia gibba HOM05D000294 ORTHO05D000177 4.1e-08 62.4 165 26.1
Zm00001eb387830 Zea mays HOM05D000294 ORTHO05D000177 4.1e-08 62.4 160 28.8
Lj6g0009382 Lotus japonicus HOM05D000294 ORTHO05D000177 5.4e-08 62.0 164 25.6
Sp7g16210 Schrenkiella parvula HOM05D000294 ORTHO05D000177 5.4e-08 62.0 172 26.2
SGA_v2.0_scaffold224G42917 Striga asiatica HOM05D000294 ORTHO05D000177 5.4e-08 62.0 144 28.5
A02p30230 Brassica napus HOM05D000294 ORTHO05D000177 7.0e-08 61.6 151 27.2
BraA02t08042Z Brassica rapa HOM05D000294 ORTHO05D000177 9.1e-08 61.2 162 24.7
Ciclev10032089m.g Citrus clementina HOM05D000294 ORTHO05D000177 9.1e-08 61.2 156 26.9
Thhalv10026159m.g Eutrema salsugineum HOM05D000294 ORTHO05D000177 9.1e-08 61.2 172 25.6
Zm00001eb341550 Zea mays HOM05D000294 ORTHO05D000177 9.1e-08 61.2 166 25.3
AUR62031495 Chenopodium quinoa HOM05D000294 ORTHO05D000177 1.2e-07 60.8 148 27.7
C07p49230 Brassica napus HOM05D000294 ORTHO05D000177 1.6e-07 60.5 150 27.3
A08p13430 Brassica napus HOM05D000294 ORTHO05D000177 2.0e-07 60.1 172 26.2
BolC8t48531H Brassica oleracea HOM05D000294 ORTHO05D000177 2.0e-07 60.1 172 25.6
BraA08t33320Z Brassica rapa HOM05D000294 ORTHO05D000177 2.0e-07 60.1 172 26.2
AUR62012367 Chenopodium quinoa HOM05D000294 ORTHO05D000177 2.0e-07 60.1 167 26.9
arahy.Tifrunner.gnm1.ann1.C1JFDB Arachis hypogaea HOM05D000294 ORTHO05D000177 2.7e-07 59.7 136 29.4
A09p33610 Brassica napus HOM05D000294 ORTHO05D000177 2.7e-07 59.7 167 24.0
BcaC07g38108 Brassica carinata HOM05D000294 ORTHO05D000177 3.5e-07 59.3 172 25.6
CARHR174790 Cardamine hirsuta HOM05D000294 ORTHO05D000177 3.5e-07 59.3 164 26.2
AT5G46710 Arabidopsis thaliana HOM05D000294 ORTHO05D000177 4.5e-07 58.9 154 27.3
arahy.Tifrunner.gnm1.ann1.N49JF0 Arachis hypogaea HOM05D000294 ORTHO05D000177 5.9e-07 58.5 136 28.7
BcaB04g18450 Brassica carinata HOM05D000294 ORTHO05D000177 7.7e-07 58.2 172 26.2
C02p47790 Brassica napus HOM05D000294 ORTHO05D000177 1.3e-06 57.4 164 25.0
C05p32120 Brassica napus HOM05D000294 ORTHO05D000177 1.3e-06 57.4 154 26.0
BolC2t10814H Brassica oleracea HOM05D000294 ORTHO05D000177 1.3e-06 57.4 164 25.0
CARHR032090 Cardamine hirsuta HOM05D000294 ORTHO05D000177 1.3e-06 57.4 154 26.0
Migut.F01355 Erythranthe guttata HOM05D000294 ORTHO05D000177 1.3e-06 57.4 129 26.4
arahy.Tifrunner.gnm1.ann1.NBZU38 Arachis hypogaea HOM05D000294 ORTHO05D000177 1.7e-06 57.0 139 30.9
Rhsim11G0018100 Rhododendron simsii HOM05D000294 ORTHO05D000177 3.8e-06 55.8 152 27.6


User provided reference genes

Program Settings