Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.D01072 Eucalyptus grandis HOM05D008698 ORTHO05D010072 1.3e-56 223.4 163 100.0
Eucgr.L01353 Eucalyptus grandis HOM05D008698 ORTHO05D010072 2.6e-54 215.7 163 96.3
Eucgr.L01355 Eucalyptus grandis HOM05D008698 ORTHO05D010072 2.5e-20 102.8 131 75.6
PGR083G1635 Punica granatum HOM05D008698 ORTHO05D010072 7.5e-17 91.3 74 77.0
Rhsim03G0068200 Rhododendron simsii HOM05D008698 ORTHO05D010072 1.1e-12 77.4 77 74.0
vmacro21117 Vaccinium macrocarpon HOM05D008698 ORTHO05D010072 2.1e-11 73.2 77 71.4
Dinv43522 Davidia involucrata HOM05D008698 ORTHO05D010072 1.1e-10 70.9 80 68.8
GSVIVG01019304001 Vitis vinifera HOM05D008698 ORTHO05D010072 4.0e-10 68.9 83 57.8
Carub.0006s1589 Capsella rubella HOM05D010517 ORTHO05D010072 5.2e-10 68.6 85 60.0
Thecc.05G234300 Theobroma cacao HOM05D008698 ORTHO05D010072 6.8e-10 68.2 79 65.8
Oeu054159.1 Olea europaea HOM05D008698 ORTHO05D010072 1.2e-09 67.4 78 66.7
Eucgr.D01077 Eucalyptus grandis HOM05D008698 ORTHO05D010072 1.5e-09 67.0 82 62.2
CiPaw.02G047000 Carya illinoinensis HOM05D008698 ORTHO05D010072 3.4e-09 65.9 80 62.5
Dinv43963 Davidia involucrata HOM05D008698 ORTHO05D010072 3.4e-09 65.9 77 63.6
BcaB08g36755 Brassica carinata HOM05D010517 ORTHO05D010072 5.8e-09 65.1 77 66.2
Duzib128G0528 Durio zibethinus HOM05D008698 ORTHO05D010072 5.8e-09 65.1 79 58.2
Ah.05g177120 Amaranthus hybridus HOM05D008698 ORTHO05D010072 6.4e-08 61.6 66 59.1
AL6G28740 Arabidopsis lyrata HOM05D010517 ORTHO05D010072 8.3e-08 61.2 74 66.2
Gohir.A11G224226 Gossypium hirsutum HOM05D008698 ORTHO05D010072 1.1e-07 60.8 78 59.0
Glyma.07G122400 Glycine max HOM05D015382 ORTHO05D019009 1.4e-07 60.5 75 52.0
Nn1g09348 Nelumbo nucifera HOM05D008698 ORTHO05D010072 1.9e-07 60.1 79 63.3
Actinidia31735 Actinidia chinensis HOM05D008698 ORTHO05D010072 2.4e-07 59.7 58 70.7
Actinidia20018 Actinidia chinensis HOM05D020756 ORTHO05D010072 3.2e-07 59.3 75 66.7
HanXRQChr07g0198711 Helianthus annuus HOM05D013051 ORTHO05D010071 5.4e-07 58.5 85 48.2
BcaC04g18771 Brassica carinata HOM05D010517 ORTHO05D010072 7.1e-07 58.2 76 56.6
Sed0010525 Sechium edule HOM05D023437 ORTHO05D010072 7.1e-07 58.2 67 55.2
BraA10t44236Z Brassica rapa HOM05D010517 ORTHO05D010072 9.2e-07 57.8 86 48.8
CANSAT25G0609 Cannabis sativa HOM05D015382 ORTHO05D010072 9.2e-07 57.8 67 62.7
TAR375G0911 Trochodendron aralioides HOM05D008698 ORTHO05D010072 9.2e-07 57.8 61 68.9
A10p21750 Brassica napus HOM05D010517 ORTHO05D010072 1.6e-06 57.0 76 64.5
CSS0001446 Camellia sinensis var. sinensis HOM05D020756 ORTHO05D010072 3.5e-06 55.8 74 67.6
HanXRQChr04g0117701 Helianthus annuus HOM05D018323 ORTHO05D010072 4.6e-06 55.5 68 61.8
QL04p053348 Quercus lobata HOM05D008698 ORTHO05D010072 6.0e-06 55.1 79 55.7
Actinidia01252 Actinidia chinensis HOM05D016621 ORTHO05D010071 7.8e-06 54.7 91 44.0


User provided reference genes

Program Settings