Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.D00856 Eucalyptus grandis HOM05D006759 ORTHO05D008633 2.0e-166 589.0 286 100.0
PGR004G2806 Punica granatum HOM05D006759 ORTHO05D008633 4.5e-142 508.1 287 84.3
MD10G1311200 Malus domestica HOM05D006759 ORTHO05D008633 2.9e-141 505.4 287 83.6
CSS0000245 Camellia sinensis var. sinensis HOM05D006759 ORTHO05D008633 6.5e-141 504.2 287 82.2
Cfa016405 Carpinus fangiana HOM05D006759 ORTHO05D008633 8.5e-141 503.8 285 81.8
CANSAT56G4156 Cannabis sativa HOM05D006759 ORTHO05D008633 1.1e-140 503.4 287 81.2
CSS0002106 Camellia sinensis var. sinensis HOM05D006759 ORTHO05D008633 2.5e-140 502.3 287 81.9
QL05p077196 Quercus lobata HOM05D006759 ORTHO05D008633 4.2e-140 501.5 286 81.1
QL93p0073_1304 Quercus lobata HOM05D006759 ORTHO05D008633 1.6e-139 499.6 286 80.8
CiPaw.09G080000 Carya illinoinensis HOM05D006759 ORTHO05D008633 2.1e-139 499.2 287 79.8
Haze_06682 Corylus avellana HOM05D006759 ORTHO05D008633 8.0e-139 497.3 287 80.8
Rhsim02G0115500 Rhododendron simsii HOM05D006759 ORTHO05D008633 1.0e-138 496.9 285 81.1
MSTRG.15955 Avicennia marina HOM05D006759 ORTHO05D008633 2.6e-137 492.3 287 80.5
vmacro15843 Vaccinium macrocarpon HOM05D006759 ORTHO05D008633 4.4e-137 491.5 287 79.4
Gorai.011G019000 Gossypium raimondii HOM05D006759 ORTHO05D008633 2.8e-136 488.8 284 79.9
RcHm_v2.0_Chr5g0004601 Rosa chinensis HOM05D006759 ORTHO05D008633 6.3e-136 487.6 287 79.8
Duzib160G0398 Durio zibethinus HOM05D006759 ORTHO05D008633 8.3e-136 487.3 284 79.9
Gohir.A10G017000 Gossypium hirsutum HOM05D006759 ORTHO05D008633 1.4e-135 486.5 284 79.6
FAN21G1217 Fragaria x ananassa HOM05D006759 ORTHO05D008633 2.4e-135 485.7 287 80.1
FAN21G3610 Fragaria x ananassa HOM05D006759 ORTHO05D008633 2.4e-135 485.7 287 80.1
MELO3C002513.2 Cucumis melo HOM05D006759 ORTHO05D008633 3.1e-135 485.3 284 78.5
FvH4_3g02960 Fragaria vesca HOM05D006759 ORTHO05D008633 3.1e-135 485.3 287 80.1
SGA_v2.0_scaffold7G03895 Striga asiatica HOM05D006759 ORTHO05D008633 3.1e-135 485.3 287 79.1
FAN25G0528 Fragaria x ananassa HOM05D006759 ORTHO05D008633 4.1e-135 485.0 287 79.8
TWI38G2336 Tripterygium wilfordii HOM05D006759 ORTHO05D008633 9.1e-135 483.8 287 77.4
Gohir.D10G017100 Gossypium hirsutum HOM05D006759 ORTHO05D008633 1.2e-134 483.4 284 79.2
Atru.chr10.2043 Acer truncatum HOM05D006759 ORTHO05D008633 4.5e-134 481.5 284 79.2
COL.COLO4_31683 Corchorus olitorius HOM05D006759 ORTHO05D008633 1.0e-133 480.3 284 77.5
CsaV3_1G011360 Cucumis sativus L. HOM05D006759 ORTHO05D008633 1.7e-133 479.6 284 77.8
Thecc.06G208000 Theobroma cacao HOM05D006759 ORTHO05D008633 1.7e-133 479.6 284 77.8
Dinv17853 Davidia involucrata HOM05D006759 ORTHO05D008633 2.9e-133 478.8 272 82.4
Lalb_Chr05g0218011 Lupinus albus HOM05D006759 ORTHO05D008633 6.5e-133 477.6 287 75.6
Carub.0007s2012 Capsella rubella HOM05D006759 ORTHO05D008633 1.1e-132 476.9 286 78.0
ClCG03G005150 Citrullus lanatus HOM05D006759 ORTHO05D008633 1.1e-132 476.9 298 75.5
BolC7t45615H Brassica oleracea HOM05D006759 ORTHO05D008633 2.5e-132 475.7 285 77.5
AT4G21320 Arabidopsis thaliana HOM05D006759 ORTHO05D008633 3.2e-132 475.3 286 77.6
Cc02_g11810 Coffea canephora HOM05D006759 ORTHO05D008633 3.2e-132 475.3 294 75.9
Migut.M01261 Erythranthe guttata HOM05D006759 ORTHO05D008633 4.2e-132 474.9 287 76.3
THA.LOC104812582 Tarenaya hassleriana HOM05D006759 ORTHO05D008633 4.2e-132 474.9 287 77.7
CARHR227890 Cardamine hirsuta HOM05D006759 ORTHO05D008633 5.5e-132 474.6 286 77.3
AL7G32800 Arabidopsis lyrata HOM05D006759 ORTHO05D008633 9.4e-132 473.8 286 76.9
A03p52720 Brassica napus HOM05D006759 ORTHO05D008633 1.6e-131 473.0 285 77.5
Prupe.4G029700 Prunus persica HOM05D006759 ORTHO05D008633 4.7e-131 471.5 271 81.2
Oeu058167.4 Olea europaea HOM05D006759 ORTHO05D008633 1.0e-130 470.3 309 73.1
SalBow8G2756 Salvia bowleyana HOM05D006759 ORTHO05D008633 1.0e-130 470.3 287 76.0
Sc05g0008410 Simmondsia chinensis HOM05D006759 ORTHO05D008633 1.0e-130 470.3 283 76.0
Medtr4g092110 Medicago truncatula HOM05D006759 ORTHO05D008633 1.8e-130 469.5 287 74.9
Nitab4.5_0006475g0040 Nicotiana tabacum HOM05D006759 ORTHO05D008633 1.8e-130 469.5 288 75.0
Ciclev10016144m.g Citrus clementina HOM05D006759 ORTHO05D008633 3.0e-130 468.8 285 78.2
Cpa.g.sc81.5 Carica papaya HOM05D006759 ORTHO05D008633 6.8e-130 467.6 282 77.3
Thhalv10025914m.g Eutrema salsugineum HOM05D006759 ORTHO05D008633 2.6e-129 465.7 284 76.1
Ca_18449_v3 Cicer arietinum L. HOM05D006759 ORTHO05D008633 3.4e-129 465.3 287 73.5
Nitab4.5_0002345g0080 Nicotiana tabacum HOM05D006759 ORTHO05D008633 3.4e-129 465.3 288 74.3
arahy.Tifrunner.gnm1.ann1.13LU1X Arachis hypogaea HOM05D006759 ORTHO05D008633 4.4e-129 464.9 288 76.0
CAN.G424.100 Capsicum annuum HOM05D006759 ORTHO05D008633 7.5e-129 464.2 287 73.5
Lj4g0006967 Lotus japonicus HOM05D006759 ORTHO05D008633 7.5e-129 464.2 287 73.2
TAR626G1069 Trochodendron aralioides HOM05D006759 ORTHO05D008633 1.3e-128 463.4 287 76.7
Aa31LG6G3340 Aethionema arabicum HOM05D006759 ORTHO05D008633 1.7e-128 463.0 286 75.5
BcaC06g30660 Brassica carinata HOM05D006759 ORTHO05D008633 1.7e-128 463.0 285 76.5
Psat7g105480 Pisum sativum HOM05D006759 ORTHO05D008633 1.7e-128 463.0 287 73.2
arahy.Tifrunner.gnm1.ann1.6345FV Arachis hypogaea HOM05D006759 ORTHO05D008633 2.8e-128 462.2 286 75.9
Sp7g19390 Schrenkiella parvula HOM05D006759 ORTHO05D008633 4.9e-128 461.5 287 75.3
Potri.011G031600 Populus trichocarpa HOM05D006759 ORTHO05D008633 6.3e-128 461.1 285 74.7
Sabra11G0019100 Salix brachista HOM05D006759 ORTHO05D008633 1.4e-127 459.9 285 75.4
PGSC0003DMG400021726 Solanum tuberosum HOM05D006759 ORTHO05D008633 2.4e-127 459.1 287 72.8
Lsat_1_v5_gn_7_18360 Lactuca sativa HOM05D006759 ORTHO05D008633 5.4e-127 458.0 286 74.1
Peaxi162Scf00082g01114 Petunia axillaris HOM05D006759 ORTHO05D008633 5.4e-127 458.0 278 75.5
Nn1g03732 Nelumbo nucifera HOM05D006759 ORTHO05D008633 1.2e-126 456.8 285 75.1
Sabra11G0024900 Salix brachista HOM05D006759 ORTHO05D008633 1.2e-126 456.8 285 75.4
Glyma.08G062300 Glycine max HOM05D006759 ORTHO05D008633 1.6e-126 456.4 287 74.6
PSO170G0831 Papaver somniferum HOM05D006759 ORTHO05D008633 1.6e-126 456.4 290 74.5
HanXRQChr05g0130811 Helianthus annuus HOM05D006759 ORTHO05D008633 4.5e-126 454.9 286 74.8
Sopen02g024680 Solanum pennellii HOM05D006759 ORTHO05D008633 5.9e-126 454.5 287 72.8
Manes.16G016600 Manihot esculenta HOM05D006759 ORTHO05D008633 5.0e-125 451.4 281 74.4
BcaNung00862 Brassica carinata HOM05D006759 ORTHO05D008633 1.1e-124 450.3 269 77.3
C07p51160 Brassica napus HOM05D006759 ORTHO05D008633 1.1e-124 450.3 269 77.3
Solyc02g079930.3 Solanum lycopersicum HOM05D006759 ORTHO05D008633 2.5e-124 449.1 287 72.1
BraA03t14346Z Brassica rapa HOM05D006759 ORTHO05D008633 4.3e-124 448.4 269 77.3
ECA236G1815 Erigeron canadensis HOM05D006759 ORTHO05D008633 5.6e-124 448.0 282 74.1
MBI02_g02472_MAGBIO Magnolia biondii HOM05D006759 ORTHO05D008633 5.6e-124 448.0 325 67.1
AUR62014623 Chenopodium quinoa HOM05D006759 ORTHO05D008633 9.5e-124 447.2 286 70.6
AUR62012578 Chenopodium quinoa HOM05D006759 ORTHO05D008633 6.1e-123 444.5 286 70.3
Ah.14g088500 Amaranthus hybridus HOM05D006759 ORTHO05D008633 1.3e-120 436.8 277 71.8
TPR.G13912 Trifolium pratense HOM05D006759 ORTHO05D008633 1.3e-120 436.8 288 70.8
EL10As6g23697 Beta vulgaris HOM05D006759 ORTHO05D008633 2.2e-120 436.0 286 70.6
unitig_37.g12139 Utricularia gibba HOM05D006759 ORTHO05D008633 1.6e-118 429.9 282 68.8
DCAR_028150 Daucus carota HOM05D006759 ORTHO05D008633 9.5e-116 420.6 269 70.6
ATR0073G021 Amborella trichopoda HOM05D006759 ORTHO05D008633 6.8e-114 414.5 268 73.1
CDE05G1382 Ceratophyllum demersum HOM05D006759 ORTHO05D008633 8.3e-112 407.5 285 65.6
Sed0013464 Sechium edule HOM05D006759 ORTHO05D008633 2.4e-111 406.0 246 77.2
Os06g0682900 Oryza sativa ssp. japonica HOM05D006759 ORTHO05D008633 4.1e-111 405.2 280 70.0
Hund21315 Selenicereus undatus HOM05D006759 ORTHO05D008633 4.1e-111 405.2 262 72.1
Zm00001eb225360 Zea mays HOM05D006759 ORTHO05D008633 1.3e-109 400.2 280 68.6
Phvul.002G218300 Phaseolus vulgaris HOM05D006759 ORTHO05D008633 1.5e-108 396.7 283 66.1
HPP92_027153 Vanilla planifolia HOM05D006759 ORTHO05D008633 1.2e-105 387.1 246 72.8
VMungo0251G0437 Vigna mungo HOM05D006759 ORTHO05D008633 2.0e-105 386.3 285 64.9
Lj1C1222T1 Lonicera japonica HOM05D006759 ORTHO05D008633 3.5e-102 375.6 239 74.1
GSVIVG01004352001 Vitis vinifera HOM05D006759 ORTHO05D008633 2.6e-97 359.4 213 78.4
SEGI_30514 Sequoiadendron giganteum HOM05D006759 ORTHO05D008633 4.0e-90 335.5 263 61.2
Actinidia36908 Actinidia chinensis HOM05D006759 ORTHO05D008633 3.4e-81 305.8 175 78.9
AagrBONN_evm.TU.Sc2ySwM_117.529 Anthoceros agrestis HOM05D006759 ORTHO05D008633 2.1e-75 286.6 260 52.7
Mapoly0122s0010 Marchantia polymorpha HOM05D006759 ORTHO05D008633 4.6e-70 268.9 259 51.7
Pp3c22_820 Physcomitrium patens HOM05D006759 ORTHO05D008633 1.3e-69 267.3 253 53.0
Pp3c18_19780 Physcomitrium patens HOM05D006759 ORTHO05D008633 6.2e-67 258.5 258 49.6
Nn2g12529 Nelumbo nucifera HOM05D006759 ORTHO05D008633 3.0e-53 213.0 152 65.1
SMO327G0040 Selaginella moellendorffii HOM05D006759 ORTHO05D008633 4.5e-49 199.1 253 41.1
GSVIVG01002901001 Vitis vinifera HOM05D006759 ORTHO05D008633 1.1e-47 194.5 110 85.5
Hund21313 Selenicereus undatus HOM05D006759 ORTHO05D008633 5.1e-45 185.7 304 41.8
CANSAT21G1109 Cannabis sativa HOM05D006759 ORTHO05D008633 3.3e-44 183.0 105 76.2
Potri.004G031100 Populus trichocarpa HOM05D006759 ORTHO05D008633 1.7e-43 180.6 194 49.5
RcHm_v2.0_Chr5g0004571 Rosa chinensis HOM05D006759 ORTHO05D008633 4.5e-41 172.6 163 56.4
Glyma.07G186901 Glycine max HOM05D006759 ORTHO05D008633 2.6e-33 146.7 94 69.1
Nn7g36203 Nelumbo nucifera HOM05D006759 ORTHO05D008633 1.3e-32 144.4 95 67.4
GSVIVG01004471001 Vitis vinifera HOM05D006759 ORTHO05D008633 1.1e-31 141.4 77 84.4
Aqoxy1G03825 Aquilegia oxysepala HOM05D006759 ORTHO05D008633 8.0e-30 135.2 88 71.6
COL.COLO4_11824 Corchorus olitorius HOM05D000068 ORTHO05D000084 2.3e-21 107.1 69 68.1
COL.COLO4_37489 Corchorus olitorius HOM05D006759 ORTHO05D161314 2.3e-21 107.1 72 65.3
Hund21314 Selenicereus undatus HOM05D006759 ORTHO05D381616 6.8e-13 79.0 41 82.9
Nn1g06940 Nelumbo nucifera HOM05D006759 ORTHO05D008633 4.3e-07 59.7 48 62.5


User provided reference genes

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