Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.D00820 Eucalyptus grandis HOM05D002065 ORTHO05D002050 1.4e-60 236.1 119 100.0
FvH4_3g02720 Fragaria vesca HOM05D002065 ORTHO05D002050 1.6e-24 116.3 107 53.3
FAN21G3944 Fragaria x ananassa HOM05D002065 ORTHO05D002050 3.5e-24 115.2 107 53.3
CiPaw.09G086400 Carya illinoinensis HOM05D002065 ORTHO05D002050 1.8e-23 112.8 110 57.3
CiPaw.09G085400 Carya illinoinensis HOM05D002065 ORTHO05D002050 2.3e-23 112.5 110 57.3
QL05p075313 Quercus lobata HOM05D002065 ORTHO05D002050 2.3e-23 112.5 111 53.2
Thecc.06G213400 Theobroma cacao HOM05D002065 ORTHO05D002050 3.0e-23 112.1 109 53.2
MD05G1340600 Malus domestica HOM05D002065 ORTHO05D002050 5.1e-23 111.3 107 55.1
Prupe.4G027000 Prunus persica HOM05D002065 ORTHO05D002050 8.7e-23 110.5 113 50.4
FAN25G0723 Fragaria x ananassa HOM05D002065 ORTHO05D002050 1.1e-22 110.2 107 51.4
Gorai.011G017400 Gossypium raimondii HOM05D002065 ORTHO05D002050 1.5e-22 109.8 109 52.3
Duzib235G0538 Durio zibethinus HOM05D002065 ORTHO05D002050 2.5e-22 109.0 109 52.3
Gohir.D10G015700 Gossypium hirsutum HOM05D002065 ORTHO05D002050 2.5e-22 109.0 109 52.3
Manes.17G029300 Manihot esculenta HOM05D002065 ORTHO05D002050 2.5e-22 109.0 105 52.4
MD10G1314100 Malus domestica HOM05D002065 ORTHO05D002050 7.4e-22 107.5 107 52.3
Gohir.A10G015700 Gossypium hirsutum HOM05D002065 ORTHO05D002050 9.7e-22 107.1 109 52.3
Hma1.2p1_0729F.1_g209610 Hydrangea macrophylla HOM05D002065 ORTHO05D002050 1.6e-21 106.3 107 50.5
COL.COLO4_31720 Corchorus olitorius HOM05D004864 ORTHO05D005393 2.8e-21 105.5 114 45.6
Rhsim13G0158100 Rhododendron simsii HOM05D002065 ORTHO05D002050 2.8e-21 105.5 102 50.0
MBI18_g06812_MAGBIO Magnolia biondii HOM05D004864 ORTHO05D002050 3.7e-21 105.1 107 55.1
TAR629G2849 Trochodendron aralioides HOM05D002065 ORTHO05D002050 4.8e-21 104.8 107 53.3
CSS0011359 Camellia sinensis var. sinensis HOM05D002065 ORTHO05D002050 1.4e-20 103.2 111 49.5
MBI18_g40467_MAGBIO Magnolia biondii HOM05D002065 ORTHO05D002050 5.3e-20 101.3 107 54.2
Dinv18891 Davidia involucrata HOM05D002065 ORTHO05D002050 6.9e-20 100.9 92 48.9
Prupe.4G026900 Prunus persica HOM05D002065 ORTHO05D002050 1.5e-19 99.8 107 46.7
Duzib192G0918 Durio zibethinus HOM05D002065 ORTHO05D002050 2.0e-19 99.4 109 45.9
PGR004G0337 Punica granatum HOM05D002065 ORTHO05D002050 2.0e-19 99.4 108 46.3
Dinv20008 Davidia involucrata HOM05D002065 ORTHO05D002050 3.4e-19 98.6 91 48.4
Cfa021640 Carpinus fangiana HOM05D002065 ORTHO05D002050 7.7e-19 97.4 108 49.1
TWI38G0471 Tripterygium wilfordii HOM05D002065 ORTHO05D002050 2.2e-18 95.9 113 48.7
Cpa.g.sc81.25 Carica papaya HOM05D002065 ORTHO05D002050 2.9e-18 95.5 97 48.5
Nn1g07008 Nelumbo nucifera HOM05D002065 ORTHO05D002050 5.0e-18 94.7 120 43.3
RcHm_v2.0_Chr5g0004121 Rosa chinensis HOM05D002065 ORTHO05D002050 6.5e-18 94.4 108 46.3
Haze_06727 Corylus avellana HOM05D004864 ORTHO05D005393 2.5e-17 92.4 101 51.5
Haze_06730 Corylus avellana HOM05D004864 ORTHO05D005393 2.5e-17 92.4 101 51.5
Gohir.D06G151332 Gossypium hirsutum HOM05D002065 ORTHO05D002050 7.2e-17 90.9 100 45.0
Gorai.010G176400 Gossypium raimondii HOM05D002065 ORTHO05D002050 7.2e-17 90.9 100 45.0
Ciclev10016810m.g Citrus clementina HOM05D002065 ORTHO05D002050 1.6e-16 89.7 117 45.3
Lj1g0010741 Lotus japonicus HOM05D002065 ORTHO05D002050 1.6e-16 89.7 116 43.1
Actinidia05537 Actinidia chinensis HOM05D002065 ORTHO05D002050 2.7e-16 89.0 92 43.5
Potri.004G023400 Populus trichocarpa HOM05D002065 ORTHO05D002050 4.6e-16 88.2 104 42.3
Sabra04G0012800 Salix brachista HOM05D004864 ORTHO05D005393 4.6e-16 88.2 104 42.3
Gohir.A06G144950 Gossypium hirsutum HOM05D002065 ORTHO05D002050 6.1e-16 87.8 100 44.0
Gohir.D10G015750 Gossypium hirsutum HOM05D002065 ORTHO05D002050 6.1e-16 87.8 112 41.1
Gorai.011G017500 Gossypium raimondii HOM05D002065 ORTHO05D002050 6.1e-16 87.8 112 41.1
Medtr7g109260 Medicago truncatula HOM05D002065 ORTHO05D002050 5.1e-15 84.7 116 43.1
Actinidia26952 Actinidia chinensis HOM05D002065 ORTHO05D002050 6.7e-15 84.3 97 40.2
Glyma.11G003000 Glycine max HOM05D002065 ORTHO05D002050 6.7e-15 84.3 117 43.6
PSO675G3505 Papaver somniferum HOM05D002065 ORTHO05D002050 2.0e-14 82.8 109 43.1
VMungo1215G2268 Vigna mungo HOM05D002065 ORTHO05D002050 2.5e-14 82.4 117 42.7
Gohir.A10G015750 Gossypium hirsutum HOM05D002065 ORTHO05D002050 1.3e-13 80.1 112 39.3
Psat3g020720 Pisum sativum HOM05D002065 ORTHO05D002050 2.2e-13 79.3 116 44.8
CSS0043809 Camellia sinensis var. sinensis HOM05D002065 ORTHO05D002050 6.3e-13 77.8 102 41.2
TPR.G20296 Trifolium pratense HOM05D002065 ORTHO05D002050 1.4e-12 76.6 90 46.7
TPR.G20274 Trifolium pratense HOM05D002065 ORTHO05D002050 2.4e-12 75.9 116 41.4
Aqoxy4G02006 Aquilegia oxysepala HOM05D002065 ORTHO05D002050 1.5e-11 73.2 102 40.2
RcHm_v2.0_Chr5g0004101 Rosa chinensis HOM05D002065 ORTHO05D002050 5.9e-11 71.2 60 55.0
ATR0794G057 Amborella trichopoda HOM05D002065 ORTHO05D002050 2.3e-07 59.3 101 32.7
QL05p075311 Quercus lobata HOM05D002065 ORTHO05D002050 3.9e-07 58.5 111 36.0
Nn1g03650 Nelumbo nucifera HOM05D002065 ORTHO05D002050 5.1e-07 58.2 99 36.4
TAR626G1859 Trochodendron aralioides HOM05D002065 ORTHO05D002050 8.8e-07 57.4 89 41.6
ATR0794G125 Amborella trichopoda HOM05D002065 ORTHO05D002050 1.5e-06 56.6 101 32.7
CiPaw.09G086500 Carya illinoinensis HOM05D002065 ORTHO05D002050 4.4e-06 55.1 105 35.2
Ciclev10017718m.g Citrus clementina HOM05D002065 ORTHO05D002050 5.7e-06 54.7 111 31.5
AUR62012636 Chenopodium quinoa HOM05D002065 ORTHO05D002050 7.4e-06 54.3 83 38.6
MBI18_g44237_MAGBIO Magnolia biondii HOM05D002065 ORTHO05D002050 9.7e-06 53.9 115 31.3


User provided reference genes

Program Settings