Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.D00710 Eucalyptus grandis HOM05D006902 ORTHO05D008468 9.3e-81 303.9 184 100.0
Eucgr.L03594 Eucalyptus grandis HOM05D006902 ORTHO05D008468 5.9e-75 284.6 179 96.6
Ciclev10016776m.g Citrus clementina HOM05D006902 ORTHO05D008468 5.5e-33 145.2 179 62.6
Thecc.06G198400 Theobroma cacao HOM05D006902 ORTHO05D008468 1.4e-31 140.6 181 61.3
Prupe.4G036300 Prunus persica HOM05D006902 ORTHO05D008468 1.2e-30 137.5 172 59.3
QL03p053069 Quercus lobata HOM05D006902 ORTHO05D008468 5.7e-30 135.2 166 60.8
Atru.chr10.2001 Acer truncatum HOM05D006902 ORTHO05D008468 3.7e-29 132.5 184 47.3
Dinv40499 Davidia involucrata HOM05D006902 ORTHO05D008468 3.7e-29 132.5 167 54.5
Potri.011G043400 Populus trichocarpa HOM05D006902 ORTHO05D008468 6.3e-29 131.7 180 46.7
Nn8g40519 Nelumbo nucifera HOM05D006902 ORTHO05D008468 8.3e-29 131.3 181 43.6
Actinidia24062 Actinidia chinensis HOM05D006902 ORTHO05D008468 2.4e-28 129.8 186 53.2
TWI38G1087 Tripterygium wilfordii HOM05D006902 ORTHO05D008468 2.4e-28 129.8 173 56.6
Hma1.2p1_0144F.1_g064740 Hydrangea macrophylla HOM05D006902 ORTHO05D008468 5.4e-28 128.6 183 51.9
Manes.16G021000 Manihot esculenta HOM05D006902 ORTHO05D008468 2.0e-27 126.7 173 59.0
Gohir.D05G168200 Gossypium hirsutum HOM05D006902 ORTHO05D008468 3.5e-27 125.9 184 54.9
RcHm_v2.0_Chr5g0006551 Rosa chinensis HOM05D006902 ORTHO05D008468 7.8e-27 124.8 182 49.5
FvH4_1g04320 Fragaria vesca HOM05D006902 ORTHO05D008468 1.7e-26 123.6 184 50.0
Sed0006938 Sechium edule HOM05D006902 ORTHO05D008468 2.3e-26 123.2 165 52.1
Gorai.009G173300 Gossypium raimondii HOM05D006902 ORTHO05D008468 3.8e-26 122.5 184 54.3
CiPaw.09G158500 Carya illinoinensis HOM05D006902 ORTHO05D008468 6.6e-26 121.7 182 57.7
CsaV3_4G028920 Cucumis sativus L. HOM05D006902 ORTHO05D008468 4.3e-25 119.0 168 50.6
PSO063G2673 Papaver somniferum HOM05D006902 ORTHO05D008468 5.6e-25 118.6 165 52.1
Sabra11G0030000 Salix brachista HOM05D006902 ORTHO05D008468 7.3e-25 118.2 184 44.0
FAN28G0433 Fragaria x ananassa HOM05D006902 ORTHO05D008468 9.5e-25 117.9 184 47.3
Potri.004G035200 Populus trichocarpa HOM05D006902 ORTHO05D008468 9.5e-25 117.9 171 43.9
Rhsim02G0120100 Rhododendron simsii HOM05D006902 ORTHO05D008468 9.5e-25 117.9 184 44.0
Migut.H01513 Erythranthe guttata HOM05D006902 ORTHO05D008468 1.2e-24 117.5 181 51.4
Gohir.A05G165200 Gossypium hirsutum HOM05D006902 ORTHO05D008468 1.2e-24 117.5 187 53.5
Lj4g0003242 Lotus japonicus HOM05D006902 ORTHO05D008468 2.8e-24 116.3 170 61.2
PSO782G4966 Papaver somniferum HOM05D006902 ORTHO05D008468 3.6e-24 115.9 165 51.5
FvH4_3g04070 Fragaria vesca HOM05D006902 ORTHO05D008468 8.0e-24 114.8 179 44.1
Medtr4g090910 Medicago truncatula HOM05D006902 ORTHO05D008468 1.4e-23 114.0 169 57.4
MD10G1302800 Malus domestica HOM05D006902 ORTHO05D008468 4.0e-23 112.5 190 42.6
QL05p081948 Quercus lobata HOM05D006902 ORTHO05D008468 5.2e-23 112.1 166 61.4
PGSC0003DMG402010824 Solanum tuberosum HOM05D006902 ORTHO05D008468 5.2e-23 112.1 164 43.3
MSTRG.14679 Avicennia marina HOM05D006902 ORTHO05D008468 6.8e-23 111.7 179 53.1
VMungo0251G2276 Vigna mungo HOM05D006902 ORTHO05D008468 6.8e-23 111.7 165 61.8
PGR004G1238 Punica granatum HOM05D006902 ORTHO05D008468 1.2e-22 110.9 173 58.4
DCAR_008067 Daucus carota HOM05D006902 ORTHO05D008468 4.4e-22 109.0 172 51.7
TPR.G32415 Trifolium pratense HOM05D006902 ORTHO05D008468 4.4e-22 109.0 168 56.5
Sc05g0008060 Simmondsia chinensis HOM05D006902 ORTHO05D008468 7.5e-22 108.2 176 57.4
Sc05g0010000 Simmondsia chinensis HOM05D006902 ORTHO05D008468 7.5e-22 108.2 176 57.4
Duzib235G0611 Durio zibethinus HOM05D000306 ORTHO05D000410 9.8e-22 107.8 152 53.9
Sopen10g004990 Solanum pennellii HOM05D006902 ORTHO05D008468 9.8e-22 107.8 163 42.3
arahy.Tifrunner.gnm1.ann1.EL94R1 Arachis hypogaea HOM05D006902 ORTHO05D008468 2.2e-21 106.7 169 56.8
ATR0580G203 Amborella trichopoda HOM05D006902 ORTHO05D008468 4.9e-21 105.5 172 40.7
Oeu038228.1 Olea europaea HOM05D006902 ORTHO05D008468 8.3e-21 104.8 204 36.3
Glyma.07G190800 Glycine max HOM05D006902 ORTHO05D008468 1.1e-20 104.4 164 59.1
arahy.Tifrunner.gnm1.ann1.G41NRI Arachis hypogaea HOM05D006902 ORTHO05D008468 1.4e-20 104.0 170 57.6
Sabra04G0021000 Salix brachista HOM05D006902 ORTHO05D008468 1.4e-20 104.0 177 40.1
ClCG04G003630 Citrullus lanatus HOM05D006902 ORTHO05D008468 2.0e-19 100.1 180 41.1
Lsat_1_v5_gn_4_57121 Lactuca sativa HOM05D006902 ORTHO05D008468 4.6e-19 99.0 178 45.5
Lalb_Chr16g0383411 Lupinus albus HOM05D006902 ORTHO05D008468 4.6e-19 99.0 173 56.6
Ca_18489_v3 Cicer arietinum L. HOM05D006902 ORTHO05D008468 6.0e-19 98.6 167 56.3
Ca_29542_v3 Cicer arietinum L. HOM05D006902 ORTHO05D008468 6.0e-19 98.6 167 56.3
Phvul.002G222700 Phaseolus vulgaris HOM05D006902 ORTHO05D008468 6.0e-19 98.6 165 58.2
EL10Ac8g20614 Beta vulgaris HOM05D006902 ORTHO05D008468 1.3e-18 97.4 169 57.4
CANSAT56G2140 Cannabis sativa HOM05D006902 ORTHO05D008468 8.6e-18 94.7 171 39.8
vmacro15868 Vaccinium macrocarpon HOM05D006902 ORTHO05D008468 8.6e-18 94.7 238 37.0
Psat7g109600 Pisum sativum HOM05D006902 ORTHO05D008468 1.1e-17 94.4 169 50.3
Glyma.08G058500 Glycine max HOM05D006902 ORTHO05D008468 1.5e-17 94.0 165 55.8
AUR62014725 Chenopodium quinoa HOM05D006902 ORTHO05D008468 2.5e-17 93.2 184 54.9
AUR62016906 Chenopodium quinoa HOM05D006902 ORTHO05D008468 5.6e-17 92.0 192 53.6
Ah.09g236070 Amaranthus hybridus HOM05D006902 ORTHO05D008468 1.2e-16 90.9 172 55.2
Ah.14g088940 Amaranthus hybridus HOM05D006902 ORTHO05D008468 1.6e-16 90.5 186 52.2
Aqoxy7G03119 Aquilegia oxysepala HOM05D006902 ORTHO05D008468 2.8e-16 89.7 167 41.3
BcaNung04470 Brassica carinata HOM05D006902 ORTHO05D008468 1.4e-15 87.4 172 52.3
CARHR011470 Cardamine hirsuta HOM05D006902 ORTHO05D008468 1.4e-15 87.4 181 51.9
COL.COLO4_31574 Corchorus olitorius HOM05D000306 ORTHO05D000410 1.4e-15 87.4 177 52.0
Nitab4.5_0003223g0030 Nicotiana tabacum HOM05D006902 ORTHO05D008468 1.4e-15 87.4 178 51.1
C05p09500 Brassica napus HOM05D006902 ORTHO05D008468 1.8e-15 87.0 174 52.3
Sp1g09900 Schrenkiella parvula HOM05D006902 ORTHO05D008468 1.8e-15 87.0 181 48.1
AT1G11240 Arabidopsis thaliana HOM05D006902 ORTHO05D008468 3.1e-15 86.3 179 44.7
SalBow7G0974 Salvia bowleyana HOM05D006902 ORTHO05D008468 4.0e-15 85.9 161 47.2
HanXRQChr17g0551071 Helianthus annuus HOM05D006902 ORTHO05D008468 5.2e-15 85.5 167 45.5
A06p07900 Brassica napus HOM05D006902 ORTHO05D008468 6.8e-15 85.1 174 50.6
BraA06t23989Z Brassica rapa HOM05D006902 ORTHO05D008468 6.8e-15 85.1 174 50.6
Aa31LG1G3550 Aethionema arabicum HOM05D006902 ORTHO05D008468 8.9e-15 84.7 168 53.0
BolC5t29692H Brassica oleracea HOM05D006902 ORTHO05D008468 8.9e-15 84.7 174 51.7
Thhalv10008794m.g Eutrema salsugineum HOM05D006902 ORTHO05D008468 2.0e-14 83.6 180 51.7
Cc02_g12510 Coffea canephora HOM05D006902 ORTHO05D008468 4.4e-14 82.4 184 51.1
ECA234G0685 Erigeron canadensis HOM05D006902 ORTHO05D008468 7.5e-14 81.6 146 45.9
Hund23624 Selenicereus undatus HOM05D006902 ORTHO05D008468 9.8e-14 81.3 105 57.1
THA.LOC104809549 Tarenaya hassleriana HOM05D006902 ORTHO05D008468 1.3e-13 80.9 168 47.6
AL1G22260 Arabidopsis lyrata HOM05D006902 ORTHO05D008468 2.9e-13 79.7 179 42.5
Nitab4.5_0005936g0020 Nicotiana tabacum HOM05D006902 ORTHO05D008468 4.9e-13 79.0 181 50.3
SGA_v2.0_scaffold159G37666 Striga asiatica HOM05D006902 ORTHO05D008468 4.9e-13 79.0 168 50.6
BolC8t49055H Brassica oleracea HOM05D006902 ORTHO05D008468 6.4e-13 78.6 182 48.9
Carub.0001s1082 Capsella rubella HOM05D006902 ORTHO05D008468 8.3e-13 78.2 173 43.4
Cpa.g.sc27.115 Carica papaya HOM05D006902 ORTHO05D008468 1.1e-12 77.8 109 47.7
Os03g0353500 Oryza sativa ssp. japonica HOM05D006902 ORTHO05D008468 1.4e-12 77.4 196 38.8
FAN25G0692 Fragaria x ananassa HOM05D006902 ORTHO05D008468 3.2e-12 76.3 148 39.9
Peaxi162Scf00371g01024 Petunia axillaris HOM05D006902 ORTHO05D008468 4.1e-12 75.9 140 42.1
FAN11G0740 Fragaria x ananassa HOM05D000306 ORTHO05D000410 1.2e-11 74.3 97 45.4
Cpa.g.c36644 Carica papaya HOM05D006902 ORTHO05D008468 3.5e-11 72.8 44 77.3
FAN23G2525 Fragaria x ananassa HOM05D006902 ORTHO05D008468 1.3e-10 70.9 109 45.0
BcaC07g38645 Brassica carinata HOM05D006902 ORTHO05D008468 8.6e-10 68.2 181 47.0
FAN26G1405 Fragaria x ananassa HOM05D006902 ORTHO05D008468 8.6e-10 68.2 108 43.5
FAN19G2227 Fragaria x ananassa HOM05D006902 ORTHO05D008468 1.1e-09 67.8 109 44.0
SEGI_26187 Sequoiadendron giganteum HOM05D006902 ORTHO05D008468 2.5e-09 66.6 168 43.5
unitig_8.g3353 Utricularia gibba HOM05D006902 ORTHO05D008468 7.3e-09 65.1 107 56.1
BcaC05g24999 Brassica carinata HOM05D006902 ORTHO05D008468 1.2e-08 64.3 106 60.4
Zm00001eb394590 Zea mays HOM05D006902 ORTHO05D008468 6.2e-08 62.0 171 41.5
MD05G1325000 Malus domestica HOM05D006902 ORTHO05D008468 1.2e-06 57.8 35 77.1
TAR636G2458 Trochodendron aralioides HOM05D006902 ORTHO05D008468 9.9e-06 54.7 100 39.0


User provided reference genes

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