Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.D00692 Eucalyptus grandis HOM05D007183 ORTHO05D008829 3.8e-162 574.7 273 100.0
PGR004G0270 Punica granatum HOM05D007183 ORTHO05D008829 3.3e-73 279.3 368 42.7
Eucgr.D00687 Eucalyptus grandis HOM05D007183 ORTHO05D008829 6.4e-69 265.0 380 41.6
MD05G1322500 Malus domestica HOM05D007183 ORTHO05D008829 3.0e-66 256.1 365 40.3
MD10G1300400 Malus domestica HOM05D007183 ORTHO05D008829 5.6e-65 251.9 365 39.7
Ciclev10017704m.g Citrus clementina HOM05D007183 ORTHO05D008829 1.2e-64 250.8 362 39.0
PGR042G2243 Punica granatum HOM05D007183 ORTHO05D008829 8.0e-64 248.1 367 40.3
TAR629G0430 Trochodendron aralioides HOM05D007183 ORTHO05D008829 1.4e-63 247.3 363 39.7
GSVIVG01006947001 Vitis vinifera HOM05D007183 ORTHO05D008829 5.2e-63 245.4 325 41.5
TWI63G1715 Tripterygium wilfordii HOM05D007183 ORTHO05D008829 1.2e-62 244.2 364 38.7
Eucgr.E03363 Eucalyptus grandis HOM05D007183 ORTHO05D008829 1.1e-60 237.7 332 41.6
GSVIVG01030561001 Vitis vinifera HOM05D007183 ORTHO05D008829 1.4e-60 237.3 359 38.7
TWI38G0385 Tripterygium wilfordii HOM05D007183 ORTHO05D008829 1.2e-59 234.2 364 38.5
FvH4_3g27971 Fragaria vesca HOM05D007183 ORTHO05D008829 1.6e-59 233.8 365 36.7
Potri.004G037400 Populus trichocarpa HOM05D007183 ORTHO05D008829 2.1e-59 233.4 344 39.2
Manes.16G023400 Manihot esculenta HOM05D007183 ORTHO05D008829 4.6e-59 232.3 348 39.9
Prupe.4G040300 Prunus persica HOM05D007183 ORTHO05D008829 6.0e-59 231.9 369 37.9
VMungo0540G0277 Vigna mungo HOM05D007183 ORTHO05D008829 7.8e-59 231.5 363 38.8
Cc05_g06690 Coffea canephora HOM05D007183 ORTHO05D008829 1.0e-58 231.1 356 37.9
Phvul.006G189500 Phaseolus vulgaris HOM05D007183 ORTHO05D008829 1.7e-58 230.3 363 38.0
RcHm_v2.0_Chr5g0007471 Rosa chinensis HOM05D007183 ORTHO05D008829 1.7e-58 230.3 365 36.7
Lj6g0020427 Lotus japonicus HOM05D007183 ORTHO05D008829 3.0e-58 229.6 356 38.8
Potri.011G046100 Populus trichocarpa HOM05D007183 ORTHO05D008829 3.3e-57 226.1 343 38.5
Dinv03840 Davidia involucrata HOM05D007183 ORTHO05D008829 1.6e-56 223.8 337 38.0
Glyma.13G243900 Glycine max HOM05D007183 ORTHO05D008829 2.8e-56 223.0 366 37.2
arahy.Tifrunner.gnm1.ann1.R2A86L Arachis hypogaea HOM05D007183 ORTHO05D008829 3.1e-55 219.5 353 38.5
arahy.Tifrunner.gnm1.ann1.CVYZ1N Arachis hypogaea HOM05D007183 ORTHO05D008829 8.9e-55 218.0 351 39.0
Manes.13G149600 Manihot esculenta HOM05D007183 ORTHO05D008829 1.2e-54 217.6 337 39.5
Psat1g207000 Pisum sativum HOM05D007183 ORTHO05D008829 5.8e-54 215.3 335 37.0
Haze_13111 Corylus avellana HOM05D007183 ORTHO05D008829 3.7e-53 212.6 344 37.5
Thecc.02G174600 Theobroma cacao HOM05D007183 ORTHO05D008829 1.1e-52 211.1 358 37.4
Thecc.06G194600 Theobroma cacao HOM05D007183 ORTHO05D008829 5.4e-52 208.8 365 36.7
Medtr2g012790 Medicago truncatula HOM05D007183 ORTHO05D008829 3.0e-50 203.0 335 36.4
Ca_00299_v3 Cicer arietinum L. HOM05D007183 ORTHO05D008829 3.9e-50 202.6 335 36.1
Hma1.2p1_0191F.1_g083390 Hydrangea macrophylla HOM05D007183 ORTHO05D008829 5.1e-50 202.2 339 36.0
Gohir.A10G022800 Gossypium hirsutum HOM05D007183 ORTHO05D008829 1.9e-49 200.3 334 36.5
Gohir.D10G023600 Gossypium hirsutum HOM05D007183 ORTHO05D008829 3.3e-49 199.5 353 36.3
Gohir.D02G181900 Gossypium hirsutum HOM05D007183 ORTHO05D008829 5.6e-49 198.7 354 35.9
Gorai.005G204400 Gossypium raimondii HOM05D007183 ORTHO05D008829 5.6e-49 198.7 354 35.9
Gorai.011G024700 Gossypium raimondii HOM05D007183 ORTHO05D008829 5.6e-49 198.7 332 36.7
Duzib235G0436 Durio zibethinus HOM05D007183 ORTHO05D008829 7.3e-49 198.4 368 35.1
Gorai.009G171300 Gossypium raimondii HOM05D007183 ORTHO05D008829 9.6e-49 198.0 344 35.8
TPR.G36730 Trifolium pratense HOM05D007183 ORTHO05D008829 9.6e-49 198.0 345 36.2
ClCG02G001190 Citrullus lanatus HOM05D007183 ORTHO05D008829 4.7e-48 195.7 322 38.5
arahy.Tifrunner.gnm1.ann1.B6W742 Arachis hypogaea HOM05D007183 ORTHO05D008829 8.1e-48 194.9 363 35.0
Sed0021459 Sechium edule HOM05D007183 ORTHO05D008829 1.4e-47 194.1 319 35.7
Gohir.D05G166200 Gossypium hirsutum HOM05D007183 ORTHO05D008829 1.8e-47 193.7 344 35.2
Aqoxy1G02644 Aquilegia oxysepala HOM05D007183 ORTHO05D008829 5.2e-47 192.2 345 35.1
CsaV3_7G004260 Cucumis sativus L. HOM05D007183 ORTHO05D008829 6.8e-47 191.8 322 37.6
COL.COLO4_35412 Corchorus olitorius HOM05D007183 ORTHO05D008829 8.9e-47 191.4 325 36.9
PSO541G4014 Papaver somniferum HOM05D007183 ORTHO05D008829 1.5e-46 190.7 324 36.1
Actinidia09880 Actinidia chinensis HOM05D007183 ORTHO05D008829 2.0e-46 190.3 329 35.6
arahy.Tifrunner.gnm1.ann1.EK8XNT Arachis hypogaea HOM05D007183 ORTHO05D008829 9.9e-46 188.0 282 40.1
PSO675G2267 Papaver somniferum HOM05D007183 ORTHO05D008829 9.9e-46 188.0 324 35.8
Nitab4.5_0007319g0020 Nicotiana tabacum HOM05D007183 ORTHO05D008829 2.2e-45 186.8 342 35.4
Gohir.A03G158800 Gossypium hirsutum HOM05D007183 ORTHO05D008829 2.9e-45 186.4 283 39.2
Nitab4.5_0001871g0020 Nicotiana tabacum HOM05D007183 ORTHO05D008829 1.1e-44 184.5 359 34.3
ATR0693G416 Amborella trichopoda HOM05D007183 ORTHO05D008829 1.4e-44 184.1 333 35.1
PGSC0003DMG400045796 Solanum tuberosum HOM05D007183 ORTHO05D008829 1.4e-44 184.1 344 35.5
Actinidia39436 Actinidia chinensis HOM05D007183 ORTHO05D008829 2.4e-44 183.3 311 37.0
Sed0026806 Sechium edule HOM05D007183 ORTHO05D008829 9.3e-44 181.4 318 37.1
Gohir.A05G163250 Gossypium hirsutum HOM05D007183 ORTHO05D008829 1.6e-43 180.6 328 34.1
TPR.G36795 Trifolium pratense HOM05D007183 ORTHO05D008829 1.3e-42 177.6 336 33.6
GSVIVG01006336001 Vitis vinifera HOM05D007183 ORTHO05D008829 1.7e-42 177.2 276 38.4
Nitab4.5_0002370g0040 Nicotiana tabacum HOM05D007183 ORTHO05D008829 3.9e-42 176.0 341 33.7
Peaxi162Scf00007g00283 Petunia axillaris HOM05D007183 ORTHO05D008829 5.1e-42 175.6 321 33.3
Dinv40521 Davidia involucrata HOM05D007183 ORTHO05D008829 6.6e-42 175.3 304 35.9
ECA234G1429 Erigeron canadensis HOM05D007183 ORTHO05D000476 6.6e-42 175.3 271 36.5
Sopen02g023560 Solanum pennellii HOM05D007183 ORTHO05D008829 1.1e-41 174.5 344 34.0
HanXRQChr05g0140521 Helianthus annuus HOM05D007183 ORTHO05D008829 2.5e-41 173.3 340 32.6
Solyc02g078710.1 Solanum lycopersicum HOM05D007183 ORTHO05D008829 9.6e-41 171.4 344 33.7
CANSAT35G0251 Cannabis sativa HOM05D007183 ORTHO05D008829 1.6e-40 170.6 331 34.4
Solyc07g054570.1 Solanum lycopersicum HOM05D007183 ORTHO05D008829 2.8e-40 169.9 338 31.4
CiPaw.09G053400 Carya illinoinensis HOM05D007183 ORTHO05D008829 3.6e-40 169.5 360 34.7
Nitab4.5_0001820g0090 Nicotiana tabacum HOM05D007183 ORTHO05D008829 3.6e-40 169.5 311 33.8
HanXRQChr16g0517841 Helianthus annuus HOM05D007183 ORTHO05D008829 8.1e-40 168.3 329 32.8
CAN.G168.28 Capsicum annuum HOM05D007183 ORTHO05D008829 3.1e-39 166.4 263 37.3
Haze_06540 Corylus avellana HOM05D007183 ORTHO05D008829 9.0e-39 164.9 342 33.3
Solyc10g008530.1 Solanum lycopersicum HOM05D007183 ORTHO05D008829 2.0e-38 163.7 330 33.9
Eucgr.L02005 Eucalyptus grandis HOM05D007183 ORTHO05D008829 3.8e-37 159.5 264 37.9
Migut.H01046 Erythranthe guttata HOM05D007183 ORTHO05D008829 4.9e-37 159.1 339 32.4
Cfa000386 Carpinus fangiana HOM05D007183 ORTHO05D008829 6.4e-37 158.7 325 32.3
Oeu038241.1 Olea europaea HOM05D007183 ORTHO05D008829 1.6e-35 154.1 334 31.4
SEGI_07341 Sequoiadendron giganteum HOM05D007183 ORTHO05D008829 3.9e-34 149.4 324 32.7
Cpa.g.sc34.121 Carica papaya HOM05D007183 ORTHO05D008829 5.1e-34 149.1 231 38.5
Migut.M01164 Erythranthe guttata HOM05D007183 ORTHO05D008829 1.1e-33 147.9 348 30.7
Lj8A115T58 Lonicera japonica HOM05D007183 ORTHO05D008829 1.1e-33 147.9 245 38.0
Glyma.15G069800 Glycine max HOM05D007183 ORTHO05D008829 1.8e-31 140.6 231 36.4
Lj2P283T62 Lonicera japonica HOM05D007183 ORTHO05D008829 2.0e-30 137.1 258 33.3
MELO3C018752.2 Cucumis melo HOM05D007183 ORTHO05D008829 2.2e-29 133.7 274 35.0
MBI02_g37921_MAGBIO Magnolia biondii HOM05D007183 ORTHO05D008829 2.9e-29 133.3 286 31.5
COL.COLO4_31536 Corchorus olitorius HOM05D007183 ORTHO05D008829 1.1e-28 131.3 292 33.6
PGSC0003DMG400042494 Solanum tuberosum HOM05D007183 ORTHO05D008829 3.2e-28 129.8 288 31.2
AagrBONN_evm.TU.Sc2ySwM_117.2587 Anthoceros agrestis HOM05D006800 ORTHO05D008478 4.6e-27 125.9 267 31.5
CAN.G996.14 Capsicum annuum HOM05D007183 ORTHO05D008829 2.3e-26 123.6 286 31.5
AagrBONN_evm.TU.Sc2ySwM_117.3060 Anthoceros agrestis HOM05D007183 ORTHO05D008829 9.6e-25 118.2 256 29.7
SMO358G0266 Selaginella moellendorffii HOM05D007183 ORTHO05D008829 2.8e-24 116.7 260 31.2
Zm00001eb258250 Zea mays HOM05D007183 ORTHO05D008829 2.8e-24 116.7 246 30.9
Solyc08g068470.1 Solanum lycopersicum HOM05D007183 ORTHO05D008829 1.1e-23 114.8 289 28.7
Cc00_g11490 Coffea canephora HOM05D007183 ORTHO05D008829 7.6e-22 108.6 245 31.4
Peaxi162Scf00812g00041 Petunia axillaris HOM05D007183 ORTHO05D008829 5.1e-18 95.9 138 38.4
DCAR_021231 Daucus carota HOM05D007183 ORTHO05D008829 6.9e-15 85.5 152 29.6
SMO343G0007 Selaginella moellendorffii HOM05D000667 ORTHO05D008829 3.9e-10 69.7 171 31.0
Peaxi162Scf00608g00919 Petunia axillaris HOM05D007183 ORTHO05D008829 2.2e-08 63.9 152 27.0
Aqoxy5G02870 Aquilegia oxysepala HOM05D000667 ORTHO05D003095 1.2e-06 58.2 180 27.8


User provided reference genes

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