Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.D00641 Eucalyptus grandis HOM05D006332 ORTHO05D008421 2.7e-247 858.2 441 100.0
PGR004G2698 Punica granatum HOM05D006332 ORTHO05D008421 1.5e-192 676.4 441 78.2
GSVIVG01002030001 Vitis vinifera HOM05D006332 ORTHO05D008421 1.3e-185 653.3 438 75.6
Manes.16G025600 Manihot esculenta HOM05D006332 ORTHO05D008421 3.0e-185 652.1 441 75.1
Gohir.D06G130900 Gossypium hirsutum HOM05D006332 ORTHO05D008421 6.7e-185 651.0 439 75.2
Cpa.g.sc27.66 Carica papaya HOM05D006332 ORTHO05D008421 1.1e-184 650.2 435 75.9
Actinidia01892 Actinidia chinensis HOM05D006332 ORTHO05D008421 3.3e-184 648.7 438 74.7
Thecc.06G190700 Theobroma cacao HOM05D006332 ORTHO05D008421 7.4e-184 647.5 439 74.7
FAN16G1437 Fragaria x ananassa HOM05D006332 ORTHO05D008421 4.8e-183 644.8 435 74.5
CiPaw.09G057500 Carya illinoinensis HOM05D006332 ORTHO05D008421 3.1e-182 642.1 440 74.1
Duzib235G1125 Durio zibethinus HOM05D006332 ORTHO05D008421 4.0e-182 641.7 440 74.8
TAR629G2846 Trochodendron aralioides HOM05D006332 ORTHO05D008421 9.0e-182 640.6 438 73.5
FvH4_3g04870 Fragaria vesca HOM05D006332 ORTHO05D008421 1.2e-181 640.2 437 73.5
Gohir.A06G126100 Gossypium hirsutum HOM05D006332 ORTHO05D008421 1.2e-181 640.2 441 74.1
COL.COLO4_31500 Corchorus olitorius HOM05D006332 ORTHO05D008421 3.4e-181 638.6 462 72.5
Dinv07538 Davidia involucrata HOM05D006332 ORTHO05D008421 9.9e-181 637.1 438 73.7
MD10G1296600 Malus domestica HOM05D006332 ORTHO05D008421 9.9e-181 637.1 446 72.6
Duzib160G0593 Durio zibethinus HOM05D006332 ORTHO05D008421 1.3e-180 636.7 436 74.8
RcHm_v2.0_Chr5g0008031 Rosa chinensis HOM05D006332 ORTHO05D008421 1.7e-180 636.3 435 72.4
FAN11G2101 Fragaria x ananassa HOM05D003523 ORTHO05D004493 2.2e-180 636.0 437 72.8
Prupe.4G044000 Prunus persica HOM05D006332 ORTHO05D008421 2.9e-180 635.6 441 72.3
FAN21G2488 Fragaria x ananassa HOM05D003523 ORTHO05D004493 1.1e-179 633.6 430 73.5
Gorai.010G152800 Gossypium raimondii HOM05D006332 ORTHO05D008421 2.5e-179 632.5 429 75.3
Glyma.13G181100 Glycine max HOM05D006332 ORTHO05D008421 3.2e-179 632.1 434 74.2
Ca_18532_v3 Cicer arietinum L. HOM05D006332 ORTHO05D008421 4.2e-179 631.7 438 73.3
Potri.004G040500 Populus trichocarpa HOM05D006332 ORTHO05D008421 4.2e-179 631.7 440 72.3
Lj1C1207T6 Lonicera japonica HOM05D006332 ORTHO05D008421 7.1e-179 630.9 435 72.6
CsaV3_1G012160 Cucumis sativus L. HOM05D006332 ORTHO05D008421 1.2e-178 630.2 443 72.0
MELO3C002589.2 Cucumis melo HOM05D006332 ORTHO05D008421 2.7e-178 629.0 443 71.8
Sed0003237 Sechium edule HOM05D006332 ORTHO05D008421 4.6e-178 628.2 442 70.8
Solyc10g008990.4 Solanum lycopersicum HOM05D006332 ORTHO05D008421 2.3e-177 625.9 442 72.2
Haze_06500 Corylus avellana HOM05D006332 ORTHO05D008421 3.0e-177 625.5 446 71.7
QL05p039635 Quercus lobata HOM05D006332 ORTHO05D008421 3.0e-177 625.5 446 71.7
PGSC0003DMG400022831 Solanum tuberosum HOM05D006332 ORTHO05D008421 3.9e-177 625.2 445 72.1
Cc02_g13080 Coffea canephora HOM05D006332 ORTHO05D008421 5.1e-177 624.8 438 71.9
Lj4g0020818 Lotus japonicus HOM05D006332 ORTHO05D008421 5.1e-177 624.8 434 73.3
arahy.Tifrunner.gnm1.ann1.5TP18E Arachis hypogaea HOM05D006332 ORTHO05D008421 4.3e-176 621.7 430 73.3
MD05G1316100 Malus domestica HOM05D006332 ORTHO05D008421 4.3e-176 621.7 446 70.4
arahy.Tifrunner.gnm1.ann1.I941VF Arachis hypogaea HOM05D006332 ORTHO05D008421 9.6e-176 620.5 429 73.4
ClCG03G005920 Citrullus lanatus HOM05D006332 ORTHO05D008421 9.6e-176 620.5 437 72.1
CANSAT35G2021 Cannabis sativa HOM05D006332 ORTHO05D008421 2.1e-175 619.4 437 73.0
Psat7g112800 Pisum sativum HOM05D006332 ORTHO05D008421 2.1e-175 619.4 440 73.2
Phvul.002G227700 Phaseolus vulgaris HOM05D006332 ORTHO05D008421 3.7e-175 618.6 432 73.8
THA.LOC104817534 Tarenaya hassleriana HOM05D006332 ORTHO05D008421 4.8e-175 618.2 442 72.2
TWI38G1702 Tripterygium wilfordii HOM05D006332 ORTHO05D008421 2.4e-174 615.9 442 71.5
TPR.G12057 Trifolium pratense HOM05D006332 ORTHO05D008421 1.2e-173 613.6 431 72.6
Glyma.07G195200 Glycine max HOM05D006332 ORTHO05D008421 1.5e-173 613.2 434 73.5
CSS0022240 Camellia sinensis var. sinensis HOM05D006332 ORTHO05D008421 2.6e-173 612.5 438 71.7
Medtr4g088960 Medicago truncatula HOM05D006332 ORTHO05D008421 7.6e-173 610.9 432 72.0
Hma1.2p1_0881F.1_g231970 Hydrangea macrophylla HOM05D006332 ORTHO05D008421 2.2e-172 609.4 438 71.5
PSO063G3883 Papaver somniferum HOM05D006332 ORTHO05D008421 1.1e-171 607.1 441 68.9
Thhalv10018568m.g Eutrema salsugineum HOM05D006332 ORTHO05D008421 5.5e-171 604.7 442 68.8
VMungo0251G1219 Vigna mungo HOM05D006332 ORTHO05D008421 9.3e-171 604.0 428 72.0
MSTRG.13186 Avicennia marina HOM05D006332 ORTHO05D008421 4.6e-170 601.7 438 71.2
Gorai.011G026200 Gossypium raimondii HOM05D006332 ORTHO05D008421 4.6e-170 601.7 436 70.9
Oeu053924.1 Olea europaea HOM05D006332 ORTHO05D008421 4.6e-170 601.7 437 70.9
Lalb_Chr16g0383661 Lupinus albus HOM05D006332 ORTHO05D008421 7.9e-170 600.9 437 71.2
Gohir.A10G024200 Gossypium hirsutum HOM05D006332 ORTHO05D008421 1.8e-169 599.7 439 70.2
Gohir.D10G024900 Gossypium hirsutum HOM05D006332 ORTHO05D008421 1.8e-169 599.7 435 70.8
Aqoxy1G02544 Aquilegia oxysepala HOM05D006332 ORTHO05D008421 3.0e-169 599.0 435 68.0
Migut.H01511 Erythranthe guttata HOM05D006332 ORTHO05D008421 8.7e-169 597.4 438 69.6
PSO782G1256 Papaver somniferum HOM05D006332 ORTHO05D008421 1.1e-168 597.0 441 68.0
HanXRQChr04g0124141 Helianthus annuus HOM05D006332 ORTHO05D008421 3.3e-168 595.5 438 69.2
AL4G47550 Arabidopsis lyrata HOM05D006332 ORTHO05D008421 1.3e-167 593.6 440 68.0
AT2G47960 Arabidopsis thaliana HOM05D006332 ORTHO05D008421 2.2e-167 592.8 437 68.4
BcaC02g12534 Brassica carinata HOM05D006332 ORTHO05D008421 2.8e-167 592.4 444 68.5
Sp4g29880 Schrenkiella parvula HOM05D006332 ORTHO05D008421 2.8e-167 592.4 442 67.0
TWI63G1670 Tripterygium wilfordii HOM05D006332 ORTHO05D008421 4.8e-167 591.7 461 67.9
Nitab4.5_0003942g0020 Nicotiana tabacum HOM05D006332 ORTHO05D008421 1.4e-166 590.1 446 69.1
C04p00010 Brassica napus HOM05D004682 ORTHO05D006197 2.0e-165 586.3 440 68.4
BolC4t21648H Brassica oleracea HOM05D004682 ORTHO05D006197 2.0e-165 586.3 440 68.4
A05p00090 Brassica napus HOM05D004682 ORTHO05D006197 4.5e-165 585.1 441 68.3
BraA05t19005Z Brassica rapa HOM05D004682 ORTHO05D006197 4.5e-165 585.1 441 68.3
Carub.0004s3069 Capsella rubella HOM05D006332 ORTHO05D008421 4.5e-165 585.1 439 67.7
Peaxi162Scf00530g00823 Petunia axillaris HOM05D006332 ORTHO05D008421 7.7e-165 584.3 441 68.7
Nn6g34413 Nelumbo nucifera HOM05D006332 ORTHO05D008421 2.2e-164 582.8 440 66.6
BcaB02g08727 Brassica carinata HOM05D006332 ORTHO05D008421 5.0e-164 581.6 446 67.3
Ciclev10015324m.g Citrus clementina HOM05D006332 ORTHO05D008421 6.5e-164 581.3 446 68.6
ATR0680G340 Amborella trichopoda HOM05D006332 ORTHO05D008421 7.2e-163 577.8 435 69.4
HanXRQChr01g0003951 Helianthus annuus HOM05D006332 ORTHO05D008421 2.3e-161 572.8 431 67.7
EL10Ac8g20347 Beta vulgaris HOM05D006332 ORTHO05D008421 1.1e-160 570.5 428 68.7
Sabra04G0025000 Salix brachista HOM05D006332 ORTHO05D008421 2.2e-159 566.2 500 61.6
ECA236G3091 Erigeron canadensis HOM05D006332 ORTHO05D008421 4.5e-157 558.5 450 64.4
CDE08G0172 Ceratophyllum demersum HOM05D006332 ORTHO05D008421 1.0e-156 557.4 439 65.1
AUR62016979 Chenopodium quinoa HOM05D006332 ORTHO05D008421 7.2e-155 551.2 431 67.3
Aa31LG1G29380 Aethionema arabicum HOM05D006332 ORTHO05D008421 3.6e-154 548.9 442 65.2
HPP92_001753 Vanilla planifolia HOM05D006332 ORTHO05D008421 1.0e-153 547.4 437 64.8
Zm00001eb044550 Zea mays HOM05D006332 ORTHO05D008421 1.0e-153 547.4 444 65.1
ECA248G3961 Erigeron canadensis HOM05D006332 ORTHO05D008421 2.0e-152 543.1 432 64.4
Nn1g04020 Nelumbo nucifera HOM05D006332 ORTHO05D008421 9.1e-150 534.3 372 71.5
CARHR143350 Cardamine hirsuta HOM05D006332 ORTHO05D008421 7.7e-149 531.2 387 70.3
AUR62014792 Chenopodium quinoa HOM05D006332 ORTHO05D008421 1.3e-148 530.4 446 64.6
Hma1.2p1_0126F.1_g059220 Hydrangea macrophylla HOM05D006332 ORTHO05D008421 5.0e-148 528.5 451 62.7
SGA_v2.0_scaffold49G18281 Striga asiatica HOM05D006332 ORTHO05D008421 8.8e-145 517.7 449 61.7
Lsat_1_v5_gn_7_19001 Lactuca sativa HOM05D006332 ORTHO05D008421 4.8e-143 511.9 434 63.4
Cfa000416 Carpinus fangiana HOM05D006332 ORTHO05D008421 8.2e-143 511.1 341 75.1
MBI17_g03748_MAGBIO Magnolia biondii HOM05D006332 ORTHO05D008421 8.2e-143 511.1 439 63.8
DCAR_004087 Daucus carota HOM05D006332 ORTHO05D008421 1.8e-137 493.4 355 71.5
Hma1.2p1_0881F.1_g231960 Hydrangea macrophylla HOM05D006332 ORTHO05D008421 5.2e-137 491.9 349 72.2
Lsat_1_v5_gn_1_127821 Lactuca sativa HOM05D006332 ORTHO05D008421 5.3e-134 481.9 440 59.1
Duzib192G0908 Durio zibethinus HOM05D006332 ORTHO05D008421 1.9e-131 473.4 358 69.8
Hund21245 Selenicereus undatus HOM05D006332 ORTHO05D008421 1.6e-130 470.3 433 59.6
Nitab4.5_0009738g0010 Nicotiana tabacum HOM05D006332 ORTHO05D008421 4.4e-128 462.2 359 67.1
unitig_8.g3355 Utricularia gibba HOM05D006332 ORTHO05D008421 1.3e-127 460.7 449 57.9
Mapoly0122s0006 Marchantia polymorpha HOM05D006332 ORTHO05D008421 4.0e-121 439.1 440 50.7
CAN.G413.15 Capsicum annuum HOM05D006332 ORTHO05D008421 8.9e-121 438.0 328 68.6
AagrBONN_evm.TU.Sc2ySwM_344.1820 Anthoceros agrestis HOM05D006332 ORTHO05D008421 2.8e-119 433.0 438 50.5
Atru.chr10.1934 Acer truncatum HOM05D006332 ORTHO05D008421 3.2e-118 429.5 290 74.8
Sc24g0000810 Simmondsia chinensis HOM05D006332 ORTHO05D008421 3.2e-118 429.5 305 71.5
Pp3c1_28670 Physcomitrium patens HOM05D006332 ORTHO05D008421 2.8e-114 416.4 434 49.8
SMO364G0571 Selaginella moellendorffii HOM05D006332 ORTHO05D008421 1.0e-113 414.5 429 49.7
CBR_g24248 Chara braunii HOM05D006332 ORTHO05D008421 2.6e-88 330.1 451 43.0
SMO364G0067 Selaginella moellendorffii HOM05D006332 ORTHO05D008421 1.2e-85 321.2 314 51.9
Gohir.A10G024325 Gossypium hirsutum HOM05D006332 ORTHO05D008421 3.3e-83 313.2 209 77.5
SHI01800 Sapria himalayana HOM05D006332 ORTHO05D008421 7.1e-78 295.4 278 60.4
Nitab4.5_0009738g0020 Nicotiana tabacum HOM05D006332 ORTHO05D008421 1.4e-73 281.2 330 49.1
Sopen10g004770 Solanum pennellii HOM05D006332 ORTHO05D008421 7.1e-70 268.9 212 62.7
Gohir.A10G024350 Gossypium hirsutum HOM05D006332 ORTHO05D008421 2.3e-44 184.1 157 59.9
PRCOL_00003805 Prasinoderma coloniale HOM05D006332 ORTHO05D008421 3.4e-40 170.2 493 30.0
SHI01798 Sapria himalayana HOM05D000002 ORTHO05D000001 2.0e-35 154.5 205 44.9
Ciclev10009862m.g Citrus clementina HOM05D006332 ORTHO05D008421 1.9e-30 137.9 102 67.6
Atru.chr10.1933 Acer truncatum HOM05D006332 ORTHO05D008421 1.6e-29 134.8 116 55.2
PSO017G7020 Papaver somniferum HOM05D006332 ORTHO05D000676 2.3e-20 104.4 110 43.6
TPR.G24681 Trifolium pratense HOM05D006332 ORTHO05D001923 4.4e-19 100.1 62 75.8
PSO170G5489 Papaver somniferum HOM05D006332 ORTHO05D008421 2.8e-18 97.4 95 46.3
Nitab4.5_0009738g0030 Nicotiana tabacum HOM05D006332 ORTHO05D008421 6.5e-15 86.3 91 52.7
Os10g0498800 Oryza sativa ssp. japonica HOM05D006332 ORTHO05D008421 2.0e-11 74.7 64 56.2
CDE02G4141 Ceratophyllum demersum HOM05D006332 ORTHO05D008421 1.1e-09 68.9 144 33.3
TPR.G32042 Trifolium pratense HOM05D006332 ORTHO05D034078 5.0e-07 60.1 38 76.3


User provided reference genes

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