Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.D00619 Eucalyptus grandis HOM05D005994 ORTHO05D007322 5.9e-55 217.2 105 100.0
Haze_06972 Corylus avellana HOM05D005994 ORTHO05D007322 1.2e-47 193.0 99 92.9
Ah.06g181210 Amaranthus hybridus HOM05D005994 ORTHO05D007322 1.0e-46 189.9 99 90.9
arahy.Tifrunner.gnm1.ann1.CR688Y Arachis hypogaea HOM05D005994 ORTHO05D007322 3.8e-46 188.0 99 87.9
arahy.Tifrunner.gnm1.ann1.R43TP7 Arachis hypogaea HOM05D005994 ORTHO05D007322 3.8e-46 188.0 99 87.9
Sc03g0008000 Simmondsia chinensis HOM05D005994 ORTHO05D007322 3.8e-46 188.0 95 92.6
EL10Ac4g07614 Beta vulgaris HOM05D005994 ORTHO05D007322 5.0e-46 187.6 99 89.9
ClCG01G010630 Citrullus lanatus HOM05D005994 ORTHO05D007322 6.5e-46 187.2 99 88.9
COL.COLO4_07784 Corchorus olitorius HOM05D005994 ORTHO05D007322 6.5e-46 187.2 99 88.9
Lj6g0002817 Lotus japonicus HOM05D005994 ORTHO05D007322 6.5e-46 187.2 98 89.8
PGR004G2260 Punica granatum HOM05D005994 ORTHO05D007322 6.5e-46 187.2 99 87.9
Sed0000308 Sechium edule HOM05D005994 ORTHO05D007322 6.5e-46 187.2 99 88.9
Thecc.06G236600 Theobroma cacao HOM05D005994 ORTHO05D007322 6.5e-46 187.2 99 87.9
Duzib235G0800 Durio zibethinus HOM05D005994 ORTHO05D007322 8.5e-46 186.8 99 88.9
VMungo0540G2179 Vigna mungo HOM05D005994 ORTHO05D007322 1.1e-45 186.4 95 91.6
CANSAT56G3985 Cannabis sativa HOM05D005994 ORTHO05D007322 1.4e-45 186.0 95 92.6
MELO3C025540.2 Cucumis melo HOM05D005994 ORTHO05D007322 1.4e-45 186.0 99 87.9
FAN25G0933 Fragaria x ananassa HOM05D005994 ORTHO05D007322 1.4e-45 186.0 99 88.9
Hund23128 Selenicereus undatus HOM05D005994 ORTHO05D007322 1.4e-45 186.0 99 87.9
Cc05_g14690 Coffea canephora HOM05D005994 ORTHO05D007322 1.9e-45 185.7 99 87.9
FvH4_3g00660 Fragaria vesca HOM05D005994 ORTHO05D007322 1.9e-45 185.7 98 90.8
Glyma.09G011900 Glycine max HOM05D005994 ORTHO05D007322 1.9e-45 185.7 95 90.5
Glyma.15G116500 Glycine max HOM05D005994 ORTHO05D007322 1.9e-45 185.7 95 90.5
Gohir.A06G204600 Gossypium hirsutum HOM05D005994 ORTHO05D007322 1.9e-45 185.7 99 86.9
Gorai.010G249300 Gossypium raimondii HOM05D005994 ORTHO05D007322 1.9e-45 185.7 99 86.9
RcHm_v2.0_Chr5g0000881 Rosa chinensis HOM05D005994 ORTHO05D007322 1.9e-45 185.7 99 88.9
Ah.04g166430 Amaranthus hybridus HOM05D000063 ORTHO05D000906 2.5e-45 185.3 94 93.6
AUR62017059 Chenopodium quinoa HOM05D005994 ORTHO05D007322 2.5e-45 185.3 99 87.9
Gohir.D06G216900 Gossypium hirsutum HOM05D005994 ORTHO05D007322 2.5e-45 185.3 99 86.9
Phvul.006G141600 Phaseolus vulgaris HOM05D005994 ORTHO05D007322 2.5e-45 185.3 95 90.5
Duzib192G0253 Durio zibethinus HOM05D005994 ORTHO05D007322 3.2e-45 184.9 99 87.9
Sed0000190 Sechium edule HOM05D005994 ORTHO05D007322 3.2e-45 184.9 99 87.9
Cfa000074 Carpinus fangiana HOM05D005994 ORTHO05D007322 4.2e-45 184.5 99 88.9
FAN21G1761 Fragaria x ananassa HOM05D005994 ORTHO05D007322 5.5e-45 184.1 99 87.9
TWI63G1647 Tripterygium wilfordii HOM05D005994 ORTHO05D007322 5.5e-45 184.1 99 86.9
CiPaw.10G079600 Carya illinoinensis HOM05D005994 ORTHO05D007322 9.4e-45 183.3 95 90.5
HanXRQChr08g0213481 Helianthus annuus HOM05D005994 ORTHO05D007322 9.4e-45 183.3 99 84.8
CsaV3_1G017030 Cucumis sativus L. HOM05D005994 ORTHO05D007322 1.2e-44 183.0 94 91.5
CsaV3_UNG053450 Cucumis sativus L. HOM05D005994 ORTHO05D007322 1.2e-44 183.0 94 91.5
Lalb_Chr19g0129971 Lupinus albus HOM05D005994 ORTHO05D007322 1.2e-44 183.0 99 87.9
Sabra06G0011700 Salix brachista HOM05D005994 ORTHO05D007322 1.2e-44 183.0 99 85.9
CARHR222840 Cardamine hirsuta HOM05D005994 ORTHO05D007322 1.6e-44 182.6 99 87.9
MD00G1058600 Malus domestica HOM05D005994 ORTHO05D007322 1.6e-44 182.6 99 85.9
Potri.006G016300 Populus trichocarpa HOM05D005994 ORTHO05D007322 1.6e-44 182.6 99 85.9
QL05p068624 Quercus lobata HOM05D005994 ORTHO05D007322 1.6e-44 182.6 99 86.9
QL05p068978 Quercus lobata HOM05D005994 ORTHO05D007322 1.6e-44 182.6 99 86.9
GSVIVG01037779001 Vitis vinifera HOM05D005994 ORTHO05D007322 1.6e-44 182.6 99 85.9
Prupe.4G007400 Prunus persica HOM05D005994 ORTHO05D007322 2.1e-44 182.2 99 85.9
AUR62040659 Chenopodium quinoa HOM05D005994 ORTHO05D007322 2.7e-44 181.8 99 86.9
Sabra16G0013400 Salix brachista HOM05D005994 ORTHO05D007322 2.7e-44 181.8 95 88.4
Sopen07g033490 Solanum pennellii HOM05D005994 ORTHO05D007322 2.7e-44 181.8 99 85.9
Aqoxy4G02214 Aquilegia oxysepala HOM05D005994 ORTHO05D007322 4.6e-44 181.0 99 83.8
MD10G1336200 Malus domestica HOM05D005994 ORTHO05D007322 4.6e-44 181.0 99 85.9
Manes.09G081660 Manihot esculenta HOM05D005994 ORTHO05D007322 4.6e-44 181.0 99 85.9
Psat1g178480 Pisum sativum HOM05D005994 ORTHO05D007322 4.6e-44 181.0 95 89.5
Solyc07g065275.1 Solanum lycopersicum HOM05D005994 ORTHO05D007322 4.6e-44 181.0 95 88.4
PGSC0003DMG400022186 Solanum tuberosum HOM05D005994 ORTHO05D007322 4.6e-44 181.0 99 85.9
MSTRG.14470 Avicennia marina HOM05D005994 ORTHO05D007322 6.1e-44 180.6 99 84.8
Lalb_Chr03g0035721 Lupinus albus HOM05D005994 ORTHO05D007322 6.1e-44 180.6 99 84.8
BcaNung00192 Brassica carinata HOM05D005994 ORTHO05D007322 7.9e-44 180.3 99 85.9
A01p21090 Brassica napus HOM05D005994 ORTHO05D007322 7.9e-44 180.3 99 85.9
C01p26360 Brassica napus HOM05D005994 ORTHO05D007322 7.9e-44 180.3 99 85.9
THA.LOC104810390 Tarenaya hassleriana HOM05D005994 ORTHO05D007322 7.9e-44 180.3 95 88.4
TPR.G10599 Trifolium pratense HOM05D005994 ORTHO05D007322 7.9e-44 180.3 95 88.4
BcaC06g33480 Brassica carinata HOM05D005994 ORTHO05D007322 1.4e-43 179.5 95 89.5
MSTRG.13010 Avicennia marina HOM05D005994 ORTHO05D007322 1.8e-43 179.1 99 83.8
A03p49850 Brassica napus HOM05D005994 ORTHO05D007322 1.8e-43 179.1 95 89.5
C07p47910 Brassica napus HOM05D005994 ORTHO05D007322 1.8e-43 179.1 95 89.5
BolC7t45314H Brassica oleracea HOM05D005994 ORTHO05D007322 1.8e-43 179.1 95 89.5
BraA03t14080Z Brassica rapa HOM05D005994 ORTHO05D007322 1.8e-43 179.1 95 89.5
Ca_00743_v3 Cicer arietinum L. HOM05D005994 ORTHO05D007322 1.8e-43 179.1 98 87.8
Sp7g15010 Schrenkiella parvula HOM05D005994 ORTHO05D007322 1.8e-43 179.1 95 89.5
Thhalv10026636m.g Eutrema salsugineum HOM05D005994 ORTHO05D007322 2.3e-43 178.7 99 84.8
BcaC09g50351 Brassica carinata HOM05D005994 ORTHO05D007322 3.0e-43 178.3 99 84.8
BolC1t02582H Brassica oleracea HOM05D005994 ORTHO05D007322 3.0e-43 178.3 99 84.8
Migut.M01676 Erythranthe guttata HOM05D005994 ORTHO05D007322 3.0e-43 178.3 99 83.8
PSO063G2191 Papaver somniferum HOM05D005994 ORTHO05D007322 3.0e-43 178.3 99 82.8
Peaxi162Scf00955g00216 Petunia axillaris HOM05D005994 ORTHO05D007322 3.0e-43 178.3 99 82.8
CSS0045306 Camellia sinensis var. sinensis HOM05D005994 ORTHO05D007322 3.9e-43 177.9 99 83.8
unitig_747.g21642 Utricularia gibba HOM05D005994 ORTHO05D007322 3.9e-43 177.9 99 83.8
vmacro11561 Vaccinium macrocarpon HOM05D005994 ORTHO05D007322 3.9e-43 177.9 99 83.8
AL7G38530 Arabidopsis lyrata HOM05D005994 ORTHO05D007322 5.1e-43 177.6 99 83.8
Carub.0007s2505 Capsella rubella HOM05D005994 ORTHO05D007322 5.1e-43 177.6 99 83.8
ECA246G1213 Erigeron canadensis HOM05D005994 ORTHO05D007322 6.7e-43 177.2 99 81.8
Medtr2g026500 Medicago truncatula HOM05D005994 ORTHO05D007322 6.7e-43 177.2 95 86.3
Nitab4.5_0000163g0320 Nicotiana tabacum HOM05D005994 ORTHO05D007322 6.7e-43 177.2 99 81.8
Nitab4.5_0001750g0060 Nicotiana tabacum HOM05D005994 ORTHO05D007322 6.7e-43 177.2 99 81.8
Rhsim06G0226700 Rhododendron simsii HOM05D005994 ORTHO05D007322 6.7e-43 177.2 99 83.8
Oeu005493.1 Olea europaea HOM05D005994 ORTHO05D007322 8.8e-43 176.8 99 82.8
Oeu005968.1 Olea europaea HOM05D005994 ORTHO05D007322 8.8e-43 176.8 99 83.8
SGA_v2.0_scaffold168G38531 Striga asiatica HOM05D005994 ORTHO05D007322 8.8e-43 176.8 99 83.8
ATR0564G257 Amborella trichopoda HOM05D005994 ORTHO05D007322 1.1e-42 176.4 99 82.8
Nitab4.5_0000461g0100 Nicotiana tabacum HOM05D005994 ORTHO05D007322 1.1e-42 176.4 99 81.8
Actinidia00094 Actinidia chinensis HOM05D005994 ORTHO05D007322 1.5e-42 176.0 99 82.8
Actinidia05033 Actinidia chinensis HOM05D005994 ORTHO05D007322 1.5e-42 176.0 99 81.8
Aa31LG2G12530 Aethionema arabicum HOM05D005994 ORTHO05D007322 1.5e-42 176.0 99 82.8
Os08g0431500 Oryza sativa ssp. japonica HOM05D005994 ORTHO05D007322 1.5e-42 176.0 99 82.8
PSO832G1566 Papaver somniferum HOM05D005994 ORTHO05D007322 2.5e-42 175.3 99 81.8
vmacro09668 Vaccinium macrocarpon HOM05D005994 ORTHO05D007322 2.5e-42 175.3 99 80.8
CAN.G337.28 Capsicum annuum HOM05D005994 ORTHO05D007322 3.3e-42 174.9 99 82.8
AT4G16450 Arabidopsis thaliana HOM05D005994 ORTHO05D007322 4.3e-42 174.5 99 82.8
Lsat_1_v5_gn_5_8041 Lactuca sativa HOM05D000063 ORTHO05D000906 4.3e-42 174.5 94 85.1
DCAR_013214 Daucus carota HOM05D005994 ORTHO05D007322 5.7e-42 174.1 99 80.8
THA.LOC104815483 Tarenaya hassleriana HOM05D005994 ORTHO05D007322 1.3e-41 172.9 100 82.0
CDE12G0176 Ceratophyllum demersum HOM05D005994 ORTHO05D007322 1.7e-41 172.6 99 79.8
MBI04_g07210_MAGBIO Magnolia biondii HOM05D005994 ORTHO05D007322 2.8e-41 171.8 94 85.1
Zm00001eb179550 Zea mays HOM05D005994 ORTHO05D007322 3.7e-41 171.4 99 80.8
Potri.016G009600 Populus trichocarpa HOM05D005994 ORTHO05D007322 4.8e-41 171.0 99 80.8
HPP92_013264 Vanilla planifolia HOM05D005994 ORTHO05D007322 8.2e-41 170.2 99 78.8
CDE01G0018 Ceratophyllum demersum HOM05D005994 ORTHO05D007322 4.1e-40 167.9 99 78.8
Ciclev10016738m.g Citrus clementina HOM05D005994 ORTHO05D007322 4.5e-39 164.5 123 67.5
Peaxi162Scf00285g00824 Petunia axillaris HOM05D005994 ORTHO05D007322 3.0e-35 151.8 95 76.8
Atru.chr1.2350 Acer truncatum HOM05D005994 ORTHO05D007322 2.2e-30 135.6 95 71.6
MBI04_g36325_MAGBIO Magnolia biondii HOM05D005994 ORTHO05D007322 3.8e-30 134.8 99 68.7
SEGI_25373 Sequoiadendron giganteum HOM05D005994 ORTHO05D007322 2.1e-28 129.0 78 75.6
Pp3c6_28950 Physcomitrium patens HOM05D005994 ORTHO05D007322 4.5e-23 111.3 86 58.1
Mapoly0008s0024 Marchantia polymorpha HOM05D005994 ORTHO05D007322 3.8e-22 108.2 90 56.7
SEGI_29999 Sequoiadendron giganteum HOM05D005994 ORTHO05D007322 5.0e-22 107.8 90 54.4
CBR_g41406 Chara braunii HOM05D005994 ORTHO05D007322 2.7e-20 102.1 86 53.5
AagrBONN_evm.TU.Sc2ySwM_368.698 Anthoceros agrestis HOM05D005994 ORTHO05D007322 4.7e-20 101.3 85 51.8
Medtr2g097750 Medicago truncatula HOM05D005994 ORTHO05D007322 1.4e-19 99.8 59 78.0
AagrBONN_evm.TU.Sc2ySwM_117.3129 Anthoceros agrestis HOM05D005994 ORTHO05D007322 3.0e-19 98.6 90 51.1
Nn5g27130 Nelumbo nucifera HOM05D005994 ORTHO05D007322 8.8e-19 97.1 52 82.7
MCO11G626 Micromonas commoda HOM05D005994 ORTHO05D007322 1.2e-18 96.7 87 55.2
TAR626G0394 Trochodendron aralioides HOM05D005994 ORTHO05D007322 1.5e-18 96.3 51 86.3
Cpa.g.sc3096.1 Carica papaya HOM05D005994 ORTHO05D007322 2.4e-16 89.0 58 69.0
SMO223G0003 Selaginella moellendorffii HOM05D005994 ORTHO05D007322 5.4e-16 87.8 85 49.4
Dinv10313 Davidia involucrata HOM05D005994 ORTHO05D007322 9.1e-16 87.0 94 54.3
Nitab4.5_0000607g0040 Nicotiana tabacum HOM05D006135 ORTHO05D007533 1.7e-14 82.8 51 72.5
HanXRQChr17g0564261 Helianthus annuus HOM05D005994 ORTHO05D007322 5.0e-14 81.3 48 75.0
Nitab4.5_0005540g0030 Nicotiana tabacum HOM05D005994 ORTHO05D007322 1.1e-13 80.1 52 73.1
Zm00001eb041720 Zea mays HOM05D005994 ORTHO05D007322 4.7e-12 74.7 55 63.6
TAR627G0003 Trochodendron aralioides HOM05D005994 ORTHO05D007322 2.3e-11 72.4 43 81.4


User provided reference genes

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