Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.D00273 Eucalyptus grandis HOM05D006325 ORTHO05D007878 2.0e-44 182.2 101 100.0
Ciclev10017179m.g Citrus clementina HOM05D006325 ORTHO05D007878 9.1e-13 77.0 103 51.5
Potri.011G081001 Populus trichocarpa HOM05D006325 ORTHO05D007878 1.6e-12 76.3 101 46.5
Glyma.05G143000 Glycine max HOM05D006325 ORTHO05D007878 2.9e-11 72.0 55 67.3
Nitab4.5_0003551g0100 Nicotiana tabacum HOM05D006325 ORTHO05D007878 5.0e-11 71.2 97 52.6
Medtr4g083110 Medicago truncatula HOM05D006325 ORTHO05D007878 6.5e-11 70.9 96 50.0
Phvul.002G178300 Phaseolus vulgaris HOM05D006325 ORTHO05D007878 6.5e-11 70.9 101 46.5
Phvul.002G179400 Phaseolus vulgaris HOM05D006325 ORTHO05D007878 6.5e-11 70.9 101 46.5
Hma1.2p1_0594F.1_g185940 Hydrangea macrophylla HOM05D006325 ORTHO05D007878 1.1e-10 70.1 77 59.7
Psat7g080440 Pisum sativum HOM05D006325 ORTHO05D007878 1.5e-10 69.7 54 64.8
Nitab4.5_0003551g0110 Nicotiana tabacum HOM05D006325 ORTHO05D007878 1.9e-10 69.3 96 53.1
Potri.004G133180 Populus trichocarpa HOM05D006325 ORTHO05D007878 1.9e-10 69.3 101 45.5
Ciclev10026747m.g Citrus clementina HOM05D006325 ORTHO05D007878 2.5e-10 68.9 91 50.5
RcHm_v2.0_Chr5g0014631 Rosa chinensis HOM05D006325 ORTHO05D007878 2.5e-10 68.9 98 48.0
TWI09G0296 Tripterygium wilfordii HOM05D006325 ORTHO05D007878 2.5e-10 68.9 103 48.5
PGSC0003DMG400011149 Solanum tuberosum HOM05D006325 ORTHO05D007878 3.2e-10 68.6 101 49.5
Nitab4.5_0002611g0130 Nicotiana tabacum HOM05D006325 ORTHO05D007878 5.5e-10 67.8 101 47.5
Sabra11G0064500 Salix brachista HOM05D006325 ORTHO05D007878 7.2e-10 67.4 102 43.1
Solyc11g020860.1 Solanum lycopersicum HOM05D006325 ORTHO05D007878 7.2e-10 67.4 43 76.7
Sopen11g011030 Solanum pennellii HOM05D006325 ORTHO05D007878 7.2e-10 67.4 43 76.7
FvH4_3g05130 Fragaria vesca HOM05D006325 ORTHO05D007878 9.4e-10 67.0 100 51.0
Lalb_Chr07g0187521 Lupinus albus HOM05D006325 ORTHO05D007878 1.2e-09 66.6 42 73.8
CiPaw.09G120800 Carya illinoinensis HOM05D006325 ORTHO05D007878 1.6e-09 66.2 99 44.4
Ciclev10026858m.g Citrus clementina HOM05D006325 ORTHO05D007878 1.6e-09 66.2 101 48.5
MD10G1258900 Malus domestica HOM05D006325 ORTHO05D007878 1.6e-09 66.2 100 53.0
PGSC0003DMG400009263 Solanum tuberosum HOM05D006325 ORTHO05D007878 1.6e-09 66.2 43 74.4
PGSC0003DMG403011204 Solanum tuberosum HOM05D006325 ORTHO05D007878 1.6e-09 66.2 101 50.5
CANSAT35G0285 Cannabis sativa HOM05D006325 ORTHO05D007878 2.1e-09 65.9 40 75.0
CsaV3_6G051960 Cucumis sativus L. HOM05D006325 ORTHO05D007878 2.1e-09 65.9 96 44.8
Glyma.08G099000 Glycine max HOM05D006325 ORTHO05D007878 2.1e-09 65.9 101 43.6
Lalb_Chr13g0293971 Lupinus albus HOM05D006325 ORTHO05D007878 2.1e-09 65.9 101 49.5
PGSC0003DMG401022984 Solanum tuberosum HOM05D006325 ORTHO05D007878 2.1e-09 65.9 102 49.0
CSS0005985 Camellia sinensis var. sinensis HOM05D006325 ORTHO05D007878 2.7e-09 65.5 48 72.9
CAN.G2122.2 Capsicum annuum HOM05D006325 ORTHO05D007878 2.7e-09 65.5 43 72.1
CiPaw.10G089300 Carya illinoinensis HOM05D006325 ORTHO05D007878 3.6e-09 65.1 99 46.5
Carub.0001s2849 Capsella rubella HOM05D006325 ORTHO05D007878 4.7e-09 64.7 60 58.3
CAN.G160.11 Capsicum annuum HOM05D006325 ORTHO05D007878 4.7e-09 64.7 101 48.5
TWI53G1846 Tripterygium wilfordii HOM05D006325 ORTHO05D007878 4.7e-09 64.7 101 47.5
CSS0005499 Camellia sinensis var. sinensis HOM05D006325 ORTHO05D007878 6.1e-09 64.3 48 70.8
Ca_18164_v3 Cicer arietinum L. HOM05D006325 ORTHO05D007878 6.1e-09 64.3 101 45.5
Peaxi162Scf00062g00009 Petunia axillaris HOM05D006325 ORTHO05D007878 6.1e-09 64.3 67 55.2
CAN.G160.10 Capsicum annuum HOM05D006325 ORTHO05D007878 8.0e-09 63.9 59 62.7
CAN.G160.12 Capsicum annuum HOM05D006325 ORTHO05D007878 8.0e-09 63.9 59 62.7
DCAR_007876 Daucus carota HOM05D006325 ORTHO05D007878 8.0e-09 63.9 64 57.8
QL05p055432 Quercus lobata HOM05D006325 ORTHO05D007878 8.0e-09 63.9 52 61.5
Sopen07g002000 Solanum pennellii HOM05D006325 ORTHO05D007878 8.0e-09 63.9 39 79.5
CAN.G160.9 Capsicum annuum HOM05D006325 ORTHO05D007878 1.0e-08 63.5 43 69.8
Medtr5g077640 Medicago truncatula HOM05D006325 ORTHO05D007878 1.0e-08 63.5 73 54.8
Medtr5g077680 Medicago truncatula HOM05D006325 ORTHO05D007878 1.0e-08 63.5 52 61.5
Medtr8g079458 Medicago truncatula HOM05D006325 ORTHO05D007878 1.0e-08 63.5 52 61.5
QL04p045948 Quercus lobata HOM05D006325 ORTHO05D007878 1.8e-08 62.8 75 52.0
PGSC0003DMG402022984 Solanum tuberosum HOM05D006325 ORTHO05D007878 1.8e-08 62.8 101 49.5
TPR.G34042 Trifolium pratense HOM05D006325 ORTHO05D007878 2.3e-08 62.4 96 44.8
CAN.G2122.1 Capsicum annuum HOM05D006325 ORTHO05D007878 3.0e-08 62.0 61 60.7
FAN11G2857 Fragaria x ananassa HOM05D006325 ORTHO05D007878 3.0e-08 62.0 99 46.5
Medtr4g012020 Medicago truncatula HOM05D006325 ORTHO05D007878 3.0e-08 62.0 52 59.6
CARHR029650 Cardamine hirsuta HOM05D006325 ORTHO05D007878 4.0e-08 61.6 48 62.5
Lsat_1_v5_gn_0_34220 Lactuca sativa HOM05D006325 ORTHO05D007878 4.0e-08 61.6 59 62.7
Medtr1437s0010 Medicago truncatula HOM05D006325 ORTHO05D007878 4.0e-08 61.6 52 59.6
Prupe.4G084800 Prunus persica HOM05D006325 ORTHO05D007878 4.0e-08 61.6 100 46.0
MELO3C007112.2 Cucumis melo HOM05D006325 ORTHO05D007878 5.2e-08 61.2 101 41.6
Lj4g0010729 Lotus japonicus HOM05D006325 ORTHO05D007878 5.2e-08 61.2 45 64.4
QL04p045922 Quercus lobata HOM05D006325 ORTHO05D007878 5.2e-08 61.2 74 52.7
AT1G30260 Arabidopsis thaliana HOM05D006325 ORTHO05D007878 6.7e-08 60.8 58 58.6
Lsat_1_v5_gn_7_27621 Lactuca sativa HOM05D006325 ORTHO05D007878 6.7e-08 60.8 40 72.5
BcaC05g27053 Brassica carinata HOM05D006325 ORTHO05D007878 8.8e-08 60.5 75 56.0
C05p29100 Brassica napus HOM05D006325 ORTHO05D007878 8.8e-08 60.5 75 56.0
BolC5t31641H Brassica oleracea HOM05D006325 ORTHO05D007878 8.8e-08 60.5 75 56.0
FAN25G3009 Fragaria x ananassa HOM05D006325 ORTHO05D007878 8.8e-08 60.5 99 45.5
Psat7g080360 Pisum sativum HOM05D006325 ORTHO05D007878 8.8e-08 60.5 96 45.8
Sopen07g002010 Solanum pennellii HOM05D006325 ORTHO05D007878 8.8e-08 60.5 104 47.1
Thecc.06G145500 Theobroma cacao HOM05D006325 ORTHO05D007878 8.8e-08 60.5 87 46.0
AL1G44210 Arabidopsis lyrata HOM05D006325 ORTHO05D007878 1.1e-07 60.1 75 52.0
BolC7t42032H Brassica oleracea HOM05D006325 ORTHO05D007878 1.1e-07 60.1 88 52.3
Cpa.g.sc17.42 Carica papaya HOM05D006325 ORTHO05D007878 1.1e-07 60.1 100 45.0
Cc00_g01980 Coffea canephora HOM05D006325 ORTHO05D007878 1.1e-07 60.1 98 42.9
Lj4g0007216 Lotus japonicus HOM05D006325 ORTHO05D007878 1.1e-07 60.1 48 62.5
Thhalv10009295m.g Eutrema salsugineum HOM05D006325 ORTHO05D007878 1.5e-07 59.7 68 55.9
BcaB03g13839 Brassica carinata HOM05D006325 ORTHO05D007878 2.0e-07 59.3 74 56.8
BcaB07g32625 Brassica carinata HOM05D006325 ORTHO05D007878 2.6e-07 58.9 75 57.3
BcaC06g35496 Brassica carinata HOM05D006325 ORTHO05D007878 2.6e-07 58.9 88 51.1
Haze_05647 Corylus avellana HOM05D006325 ORTHO05D007878 2.6e-07 58.9 44 65.9
FAN21G1261 Fragaria x ananassa HOM05D006325 ORTHO05D007878 2.6e-07 58.9 99 44.4
Manes.17G073700 Manihot esculenta HOM05D006325 ORTHO05D007878 2.6e-07 58.9 101 42.6
Nitab4.5_0008310g0030 Nicotiana tabacum HOM05D006325 ORTHO05D007878 2.6e-07 58.9 59 55.9
Nn3g20453 Nelumbo nucifera HOM05D006325 ORTHO05D007878 3.3e-07 58.5 66 54.5
Oeu030955.1 Olea europaea HOM05D006325 ORTHO05D007878 3.3e-07 58.5 38 68.4
Sp1g26100 Schrenkiella parvula HOM05D006325 ORTHO05D007878 3.3e-07 58.5 83 50.6
ClCG01G024840 Citrullus lanatus HOM05D006325 ORTHO05D007878 4.4e-07 58.2 55 58.2
Oeu030957.1 Olea europaea HOM05D006325 ORTHO05D007878 4.4e-07 58.2 57 52.6
A07p10030 Brassica napus HOM05D006325 ORTHO05D007878 5.7e-07 57.8 88 51.1
BraA07t28796Z Brassica rapa HOM05D006325 ORTHO05D007878 5.7e-07 57.8 88 51.1
FAN16G1041 Fragaria x ananassa HOM05D006325 ORTHO05D007878 5.7e-07 57.8 99 44.4
FAN16G2667 Fragaria x ananassa HOM05D006325 ORTHO05D007878 5.7e-07 57.8 99 44.4
Duzib192G0952 Durio zibethinus HOM05D006325 ORTHO05D007878 7.5e-07 57.4 87 42.5
TPR.G21965 Trifolium pratense HOM05D006325 ORTHO05D007878 7.5e-07 57.4 58 58.6
Gohir.A06G139600 Gossypium hirsutum HOM05D006325 ORTHO05D007878 9.7e-07 57.0 60 55.0
A09p36260 Brassica napus HOM05D006325 ORTHO05D007878 1.3e-06 56.6 89 49.4
Gohir.D05G149100 Gossypium hirsutum HOM05D006325 ORTHO05D007878 1.7e-06 56.2 87 48.3
Gorai.009G153100 Gossypium raimondii HOM05D006325 ORTHO05D007878 1.7e-06 56.2 88 50.0
BraA09t39151Z Brassica rapa HOM05D006325 ORTHO05D007878 2.2e-06 55.8 88 50.0
Gohir.A05G146600 Gossypium hirsutum HOM05D006325 ORTHO05D007878 2.2e-06 55.8 87 48.3
Aa31LG6G5500 Aethionema arabicum HOM05D006325 ORTHO05D007878 2.8e-06 55.5 39 64.1
Psat7g080320 Pisum sativum HOM05D006325 ORTHO05D007878 3.7e-06 55.1 76 48.7
Gohir.D06G144350 Gossypium hirsutum HOM05D006325 ORTHO05D007878 4.8e-06 54.7 60 53.3
Gorai.010G168000 Gossypium raimondii HOM05D006325 ORTHO05D007878 4.8e-06 54.7 60 53.3
COL.COLO4_31021 Corchorus olitorius HOM05D006325 ORTHO05D007878 6.3e-06 54.3 101 40.6
Gohir.A10G043400 Gossypium hirsutum HOM05D006325 ORTHO05D007878 6.3e-06 54.3 48 58.3
Gohir.D10G044600 Gossypium hirsutum HOM05D006325 ORTHO05D007878 6.3e-06 54.3 48 58.3
Gorai.011G047600 Gossypium raimondii HOM05D006325 ORTHO05D007878 6.3e-06 54.3 48 58.3
Sed0008419 Sechium edule HOM05D006325 ORTHO05D007878 8.2e-06 53.9 97 42.3


User provided reference genes

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