Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.D00266 Eucalyptus grandis HOM05D007799 ORTHO05D009854 9.9e-138 493.4 245 100.0
Manes.15G125000 Manihot esculenta HOM05D007799 ORTHO05D009854 1.4e-88 330.1 244 66.8
QL05p055084 Quercus lobata HOM05D007799 ORTHO05D009854 5.5e-88 328.2 248 64.5
Lj6g0006831 Lotus japonicus HOM05D007799 ORTHO05D009854 6.7e-86 321.2 247 61.9
Glyma.15G090500 Glycine max HOM05D007799 ORTHO05D009854 1.7e-84 316.6 248 62.1
Cfa000897 Carpinus fangiana HOM05D007799 ORTHO05D009854 4.8e-84 315.1 244 61.5
Glyma.13G221700 Glycine max HOM05D007799 ORTHO05D009854 6.9e-83 311.2 248 60.9
Duzib192G0648 Durio zibethinus HOM05D007799 ORTHO05D009854 9.1e-83 310.8 244 61.1
Thecc.06G144300 Theobroma cacao HOM05D007799 ORTHO05D009854 2.0e-82 309.7 238 63.0
PGR083G2472 Punica granatum HOM05D007799 ORTHO05D009854 3.4e-82 308.9 259 61.4
Medtr2g018670 Medicago truncatula HOM05D007799 ORTHO05D009854 1.9e-80 303.1 248 59.7
Atru.chr10.1081 Acer truncatum HOM05D007799 ORTHO05D009854 2.5e-80 302.8 216 65.7
Duzib235G1165 Durio zibethinus HOM05D007799 ORTHO05D009854 2.5e-80 302.8 239 62.3
Prupe.4G085700 Prunus persica HOM05D007799 ORTHO05D009854 3.2e-80 302.4 242 60.7
CiPaw.09G119600 Carya illinoinensis HOM05D007799 ORTHO05D009854 5.5e-80 301.6 250 61.2
CiPaw.10G088800 Carya illinoinensis HOM05D007799 ORTHO05D009854 1.6e-79 300.1 252 60.3
Ciclev10016395m.g Citrus clementina HOM05D007799 ORTHO05D009854 2.1e-79 299.7 247 59.1
COL.COLO4_31009 Corchorus olitorius HOM05D007799 ORTHO05D009854 2.7e-79 299.3 223 63.2
VMungo0540G2150 Vigna mungo HOM05D007799 ORTHO05D009854 2.7e-79 299.3 249 59.0
Psat1g192080 Pisum sativum HOM05D007799 ORTHO05D009854 3.6e-79 298.9 248 60.9
MD10G1258100 Malus domestica HOM05D007799 ORTHO05D009854 6.7e-78 294.7 232 59.5
RcHm_v2.0_Chr5g0014941 Rosa chinensis HOM05D007799 ORTHO05D009854 6.7e-78 294.7 244 59.0
Ca_00511_v3 Cicer arietinum L. HOM05D007799 ORTHO05D009854 1.1e-77 293.9 246 59.8
CANSAT35G1982 Cannabis sativa HOM05D007799 ORTHO05D009854 1.5e-77 293.5 253 60.1
arahy.Tifrunner.gnm1.ann1.NZ6SRJ Arachis hypogaea HOM05D007799 ORTHO05D009854 9.7e-77 290.8 246 56.9
Lalb_Chr20g0117681 Lupinus albus HOM05D007799 ORTHO05D009854 1.3e-76 290.4 238 60.5
arahy.Tifrunner.gnm1.ann1.80ML42 Arachis hypogaea HOM05D007799 ORTHO05D009854 2.2e-76 289.7 246 56.9
TPR.G26257 Trifolium pratense HOM05D007799 ORTHO05D009854 8.2e-76 287.7 244 58.6
Lalb_Chr15g0086631 Lupinus albus HOM05D007799 ORTHO05D009854 4.1e-75 285.4 243 57.6
Glyma.05G143400 Glycine max HOM05D007799 ORTHO05D009854 5.3e-75 285.0 248 57.3
Glyma.08G099800 Glycine max HOM05D007799 ORTHO05D009854 7.0e-75 284.6 248 57.3
PGSC0003DMG400002292 Solanum tuberosum HOM05D007799 ORTHO05D009854 1.2e-74 283.9 226 61.9
MD05G1279400 Malus domestica HOM05D007799 ORTHO05D009854 2.0e-74 283.1 248 55.2
FAN16G3425 Fragaria x ananassa HOM05D007799 ORTHO05D009854 2.6e-74 282.7 246 57.7
FAN11G0145 Fragaria x ananassa HOM05D007799 ORTHO05D009854 4.5e-74 282.0 246 57.7
FvH4_3g05030 Fragaria vesca HOM05D007799 ORTHO05D009854 5.9e-74 281.6 246 57.7
FAN25G3832 Fragaria x ananassa HOM05D007799 ORTHO05D009854 1.3e-73 280.4 246 57.7
Oeu032721.1 Olea europaea HOM05D007799 ORTHO05D009854 2.2e-73 279.6 220 60.0
Potri.011G081701 Populus trichocarpa HOM05D007799 ORTHO05D009854 2.2e-73 279.6 220 61.8
Gorai.010G237400 Gossypium raimondii HOM05D007799 ORTHO05D009854 8.5e-73 277.7 215 63.3
FAN21G3556 Fragaria x ananassa HOM05D007799 ORTHO05D009854 3.2e-72 275.8 246 56.9
Nitab4.5_0005655g0010 Nicotiana tabacum HOM05D007799 ORTHO05D009854 3.2e-72 275.8 240 57.9
CSS0034958 Camellia sinensis var. sinensis HOM05D007799 ORTHO05D009854 5.5e-72 275.0 230 58.7
Gohir.A06G196000 Gossypium hirsutum HOM05D007799 ORTHO05D009854 7.2e-72 274.6 215 62.8
Lalb_Chr13g0294011 Lupinus albus HOM05D007799 ORTHO05D009854 9.4e-72 274.2 247 55.1
Medtr8g079475 Medicago truncatula HOM05D007799 ORTHO05D009854 9.4e-72 274.2 248 53.6
Haze_05684 Corylus avellana HOM05D007799 ORTHO05D009854 1.6e-71 273.5 244 57.0
VMungo0251G0945 Vigna mungo HOM05D007799 ORTHO05D009854 1.6e-71 273.5 218 59.6
Rhsim13G0117700 Rhododendron simsii HOM05D007799 ORTHO05D009854 2.1e-71 273.1 221 59.3
Peaxi162Scf00045g02414 Petunia axillaris HOM05D007799 ORTHO05D009854 3.6e-71 272.3 239 56.9
Gohir.D06G203500 Gossypium hirsutum HOM05D007799 ORTHO05D009854 4.7e-71 271.9 210 62.9
Phvul.002G177900 Phaseolus vulgaris HOM05D007799 ORTHO05D009854 6.1e-71 271.6 238 55.9
CSS0035706 Camellia sinensis var. sinensis HOM05D007799 ORTHO05D009854 1.0e-70 270.8 230 57.4
MBI02_g12199_MAGBIO Magnolia biondii HOM05D007799 ORTHO05D009854 6.7e-70 268.1 221 55.2
Oeu031191.1 Olea europaea HOM05D007799 ORTHO05D009854 2.0e-69 266.5 217 61.3
arahy.Tifrunner.gnm1.ann1.GW4I6G Arachis hypogaea HOM05D002205 ORTHO05D004847 2.8e-68 262.7 249 55.4
arahy.Tifrunner.gnm1.ann1.W0WEAA Arachis hypogaea HOM05D007799 ORTHO05D009854 6.3e-68 261.5 249 55.0
Migut.K01168 Erythranthe guttata HOM05D007799 ORTHO05D009854 1.8e-67 260.0 208 58.7
MBI18_g11218_MAGBIO Magnolia biondii HOM05D007799 ORTHO05D009854 2.4e-67 259.6 221 55.2
GSVIVG01021549001 Vitis vinifera HOM05D007799 ORTHO05D009854 2.4e-67 259.6 219 58.0
Cc00_g02020 Coffea canephora HOM05D007799 ORTHO05D009854 4.5e-66 255.4 221 54.8
SalBow8G4130 Salvia bowleyana HOM05D007799 ORTHO05D009854 2.9e-65 252.7 226 55.3
DCAR_003890 Daucus carota HOM05D007799 ORTHO05D009854 2.3e-62 243.0 254 48.8
Actinidia32344 Actinidia chinensis HOM05D007799 ORTHO05D009854 8.8e-62 241.1 211 54.5
Nitab4.5_0000315g0030 Nicotiana tabacum HOM05D007799 ORTHO05D009854 6.3e-60 235.0 240 52.5
CsaV3_1G036880 Cucumis sativus L. HOM05D007799 ORTHO05D009854 5.4e-59 231.9 219 53.0
ClCG03G006490 Citrullus lanatus HOM05D007799 ORTHO05D009854 7.0e-59 231.5 237 50.2
Phvul.006G168136 Phaseolus vulgaris HOM05D007799 ORTHO05D009854 7.7e-58 228.0 195 56.4
vmacro03431 Vaccinium macrocarpon HOM05D007799 ORTHO05D009854 1.0e-57 227.6 245 50.2
Nn3g20329 Nelumbo nucifera HOM05D007799 ORTHO05D009854 2.3e-57 226.5 220 51.4
HPP92_026553 Vanilla planifolia HOM05D007799 ORTHO05D009854 6.5e-57 224.9 221 46.6
HanXRQChr15g0482011 Helianthus annuus HOM05D007799 ORTHO05D009854 1.9e-56 223.4 248 46.0
Lsat_1_v5_gn_7_27461 Lactuca sativa HOM05D007799 ORTHO05D009854 3.2e-56 222.6 241 49.0
Sed0012400 Sechium edule HOM05D007799 ORTHO05D009854 3.6e-55 219.2 212 53.3
TPR.G9572 Trifolium pratense HOM05D007799 ORTHO05D009854 1.8e-54 216.9 187 55.6
HanXRQChr04g0116571 Helianthus annuus HOM05D007799 ORTHO05D009854 4.0e-54 215.7 225 49.8
ECA236G2997 Erigeron canadensis HOM05D007799 ORTHO05D009854 1.2e-53 214.2 230 47.4
Dinv32213 Davidia involucrata HOM05D007799 ORTHO05D009854 5.7e-53 211.8 183 59.6
CDE12G0863 Ceratophyllum demersum HOM05D007799 ORTHO05D009854 7.5e-53 211.5 222 45.5
ATR1098G006 Amborella trichopoda HOM05D007799 ORTHO05D009854 4.1e-51 205.7 218 45.0
TAR624G0778 Trochodendron aralioides HOM05D007799 ORTHO05D009854 1.2e-50 204.1 157 65.0
DCAR_007872 Daucus carota HOM05D007799 ORTHO05D009854 5.9e-50 201.8 236 43.6
HPP92_028169 Vanilla planifolia HOM05D007799 ORTHO05D009854 6.6e-49 198.4 225 41.8
Sopen08g008720 Solanum pennellii HOM05D007799 ORTHO05D009854 4.4e-37 159.1 143 55.9
Solyc08g023510.3 Solanum lycopersicum HOM05D007799 ORTHO05D009854 9.2e-35 151.4 136 55.1
MELO3C035703.2 Cucumis melo HOM05D007799 ORTHO05D009854 1.6e-31 140.6 172 44.2
Lj1C1169G11 Lonicera japonica HOM05D002205 ORTHO05D004847 4.9e-28 129.0 96 66.7
HPP92_026526 Vanilla planifolia HOM05D007799 ORTHO05D009854 2.0e-21 107.1 92 48.9
TPR.G18987 Trifolium pratense HOM05D007799 ORTHO05D009854 1.0e-17 94.7 80 55.0
SEGI_29226 Sequoiadendron giganteum HOM05D007799 ORTHO05D009854 1.9e-16 90.5 173 31.8
SEGI_17039 Sequoiadendron giganteum HOM05D014396 ORTHO05D017117 2.4e-06 57.0 207 22.2
SEGI_23668 Sequoiadendron giganteum HOM05D014396 ORTHO05D017117 3.1e-06 56.6 217 22.6


User provided reference genes

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