Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.D00174 Eucalyptus grandis HOM05D000169 ORTHO05D007693 2.8e-51 204.9 99 100.0
ClCG01G025160 Citrullus lanatus HOM05D000169 ORTHO05D007693 1.0e-32 143.3 94 71.3
Sed0014236 Sechium edule HOM05D000169 ORTHO05D007693 2.9e-32 141.7 94 69.1
MELO3C007073.2 Cucumis melo HOM05D000169 ORTHO05D007693 8.6e-32 140.2 94 71.3
Lj6g0025648 Lotus japonicus HOM05D000169 ORTHO05D007693 3.3e-31 138.3 94 66.0
TPR.G26348 Trifolium pratense HOM05D000169 ORTHO05D007693 3.3e-31 138.3 91 70.3
Dinv10791 Davidia involucrata HOM05D000169 ORTHO05D007693 4.3e-31 137.9 94 66.0
Cfa000807 Carpinus fangiana HOM05D000169 ORTHO05D007693 5.6e-31 137.5 94 67.0
Haze_05866 Corylus avellana HOM05D000169 ORTHO05D007693 1.2e-30 136.3 94 67.0
Lj2C330T2 Lonicera japonica HOM05D000169 ORTHO05D007693 1.2e-30 136.3 94 67.0
TWI15G0677 Tripterygium wilfordii HOM05D000169 ORTHO05D007693 2.8e-30 135.2 94 68.1
CSS0003732 Camellia sinensis var. sinensis HOM05D000169 ORTHO05D007693 3.6e-30 134.8 91 68.1
Lalb_Chr20g0120061 Lupinus albus HOM05D000169 ORTHO05D007693 3.6e-30 134.8 91 65.9
SGA_v2.0_scaffold51G18657 Striga asiatica HOM05D004088 ORTHO05D007693 4.7e-30 134.4 94 67.0
vmacro03383 Vaccinium macrocarpon HOM05D000169 ORTHO05D007693 4.7e-30 134.4 94 68.1
vmacro03453 Vaccinium macrocarpon HOM05D000169 ORTHO05D007693 4.7e-30 134.4 94 68.1
Duzib235G0404 Durio zibethinus HOM05D000169 ORTHO05D007693 6.1e-30 134.0 94 66.0
SalBow7G0208 Salvia bowleyana HOM05D000169 ORTHO05D007693 6.1e-30 134.0 94 64.9
Gorai.009G115300 Gossypium raimondii HOM05D000169 ORTHO05D007693 8.0e-30 133.7 94 66.0
Nitab4.5_0001225g0090 Nicotiana tabacum HOM05D000169 ORTHO05D007693 8.0e-30 133.7 94 66.0
Actinidia33686 Actinidia chinensis HOM05D000169 ORTHO05D007693 1.0e-29 133.3 94 66.0
PGSC0003DMG400021188 Solanum tuberosum HOM05D000169 ORTHO05D007693 1.0e-29 133.3 94 64.9
VMungo0540G1641 Vigna mungo HOM05D000169 ORTHO05D007693 1.4e-29 132.9 94 68.1
Gohir.D05G111000 Gossypium hirsutum HOM05D000169 ORTHO05D007693 1.8e-29 132.5 94 64.9
Solyc02g069920.4 Solanum lycopersicum HOM05D000169 ORTHO05D007693 2.3e-29 132.1 94 64.9
Sopen02g019060 Solanum pennellii HOM05D000169 ORTHO05D007693 2.3e-29 132.1 94 64.9
MSTRG.16292 Avicennia marina HOM05D000169 ORTHO05D007693 4.0e-29 131.3 94 62.8
CsaV3_6G052370 Cucumis sativus L. HOM05D000169 ORTHO05D007693 4.0e-29 131.3 94 67.0
Medtr2g030240 Medicago truncatula HOM05D000356 ORTHO05D007693 4.0e-29 131.3 87 69.0
CiPaw.09G141800 Carya illinoinensis HOM05D000169 ORTHO05D007693 5.2e-29 131.0 94 64.9
Nitab4.5_0001583g0010 Nicotiana tabacum HOM05D000169 ORTHO05D007693 5.2e-29 131.0 94 64.9
Psat1g167440 Pisum sativum HOM05D000169 ORTHO05D007693 6.8e-29 130.6 87 66.7
Ciclev10017814m.g Citrus clementina HOM05D000169 ORTHO05D007693 8.9e-29 130.2 91 63.7
Oeu008957.2 Olea europaea HOM05D000169 ORTHO05D007693 8.9e-29 130.2 94 64.9
Rhsim13G0121500 Rhododendron simsii HOM05D000169 ORTHO05D007693 8.9e-29 130.2 94 67.0
Ca_00844_v3 Cicer arietinum L. HOM05D000169 ORTHO05D007693 1.2e-28 129.8 87 67.8
arahy.Tifrunner.gnm1.ann1.T5Y52R Arachis hypogaea HOM05D000169 ORTHO05D007693 1.5e-28 129.4 90 66.7
Glyma.15G130500 Glycine max HOM05D000169 ORTHO05D007693 1.5e-28 129.4 94 62.8
CiPaw.10G109200 Carya illinoinensis HOM05D000169 ORTHO05D007693 2.0e-28 129.0 91 65.9
Potri.011G164100 Populus trichocarpa HOM05D000169 ORTHO05D007693 2.0e-28 129.0 94 63.8
Cpa.g.sc166.41 Carica papaya HOM05D004256 ORTHO05D007693 2.6e-28 128.6 94 61.7
Phvul.006G128100 Phaseolus vulgaris HOM05D000169 ORTHO05D007693 2.6e-28 128.6 94 64.9
THA.LOC104814347 Tarenaya hassleriana HOM05D000356 ORTHO05D007693 3.4e-28 128.3 91 62.6
Migut.H01327 Erythranthe guttata HOM05D000169 ORTHO05D007693 4.4e-28 127.9 94 58.5
Prupe.4G090600 Prunus persica HOM05D000169 ORTHO05D007693 5.7e-28 127.5 94 61.7
QL05p062500 Quercus lobata HOM05D000169 ORTHO05D007693 5.7e-28 127.5 91 62.6
Sc10g0006290 Simmondsia chinensis HOM05D000169 ORTHO05D007693 5.7e-28 127.5 94 63.8
arahy.Tifrunner.gnm1.ann1.D0AYNK Arachis hypogaea HOM05D000169 ORTHO05D007693 1.3e-27 126.3 87 66.7
RcHm_v2.0_Chr5g0016071 Rosa chinensis HOM05D000169 ORTHO05D007693 1.3e-27 126.3 94 58.5
TAR627G0736 Trochodendron aralioides HOM05D000169 ORTHO05D007693 1.7e-27 125.9 91 63.7
Sc10g0005430 Simmondsia chinensis HOM05D000169 ORTHO05D007693 2.2e-27 125.6 94 62.8
AT1G30520 Arabidopsis thaliana HOM05D000169 ORTHO05D007693 3.7e-27 124.8 91 60.4
Atru.chr10.844 Acer truncatum HOM05D000169 ORTHO05D007693 6.4e-27 124.0 91 60.4
A09p35920 Brassica napus HOM05D000169 ORTHO05D007693 6.4e-27 124.0 91 61.5
BraA09t39117Z Brassica rapa HOM05D000169 ORTHO05D007693 6.4e-27 124.0 91 61.5
Thhalv10007264m.g Eutrema salsugineum HOM05D000169 ORTHO05D007693 6.4e-27 124.0 91 61.5
FvH4_3g10160 Fragaria vesca HOM05D000169 ORTHO05D007693 6.4e-27 124.0 94 56.4
FAN11G3594 Fragaria x ananassa HOM05D000169 ORTHO05D007693 6.4e-27 124.0 94 56.4
HanXRQChr04g0116481 Helianthus annuus HOM05D000169 ORTHO05D007693 6.4e-27 124.0 91 59.3
Sp1g26370 Schrenkiella parvula HOM05D000169 ORTHO05D007693 6.4e-27 124.0 91 61.5
BcaB07g32664 Brassica carinata HOM05D000356 ORTHO05D007693 8.3e-27 123.6 91 60.4
BcaB07g32688 Brassica carinata HOM05D000169 ORTHO05D007693 8.3e-27 123.6 91 60.4
BolC5t31685H Brassica oleracea HOM05D000169 ORTHO05D007693 1.1e-26 123.2 91 60.4
GSVIVG01021658001 Vitis vinifera HOM05D000169 ORTHO05D007693 1.1e-26 123.2 94 62.8
C05p29540 Brassica napus HOM05D000169 ORTHO05D007693 1.4e-26 122.9 91 60.4
Carub.0001s2876 Capsella rubella HOM05D000169 ORTHO05D007693 2.4e-26 122.1 91 60.4
Lsat_1_v5_gn_7_27381 Lactuca sativa HOM05D000169 ORTHO05D007693 2.4e-26 122.1 91 59.3
ECA236G2888 Erigeron canadensis HOM05D000169 ORTHO05D007693 3.2e-26 121.7 87 64.4
FAN21G3676 Fragaria x ananassa HOM05D000169 ORTHO05D007693 3.2e-26 121.7 94 56.4
Nn4g26677 Nelumbo nucifera HOM05D000356 ORTHO05D007693 4.1e-26 121.3 94 61.7
Hund19369 Selenicereus undatus HOM05D000169 ORTHO05D007693 4.1e-26 121.3 94 58.5
Aa31LG6G11770 Aethionema arabicum HOM05D000169 ORTHO05D007693 5.4e-26 120.9 91 60.4
MD10G1252900 Malus domestica HOM05D000169 ORTHO05D007693 5.4e-26 120.9 94 56.4
CDE03G0252 Ceratophyllum demersum HOM05D000169 ORTHO05D007693 9.2e-26 120.2 88 60.2
FAN25G2274 Fragaria x ananassa HOM05D000169 ORTHO05D007693 9.2e-26 120.2 94 56.4
AL1G44564 Arabidopsis lyrata HOM05D000169 ORTHO05D007693 1.2e-25 119.8 91 59.3
Glyma.09G024500 Glycine max HOM05D000169 ORTHO05D007693 2.0e-25 119.0 94 59.6
ATR0165G033 Amborella trichopoda HOM05D000169 ORTHO05D007693 3.5e-25 118.2 95 60.0
Cc09_g04180 Coffea canephora HOM05D000169 ORTHO05D007693 3.5e-25 118.2 97 58.8
CDE06G2571 Ceratophyllum demersum HOM05D000169 ORTHO05D007693 5.9e-25 117.5 84 61.9
CANSAT35G1370 Cannabis sativa HOM05D000169 ORTHO05D007693 1.3e-24 116.3 96 57.3
PSO675G5523 Papaver somniferum HOM05D000169 ORTHO05D007693 2.3e-24 115.5 84 59.5
unitig_21.g20626 Utricularia gibba HOM05D000169 ORTHO05D007693 6.6e-24 114.0 94 54.3
AUR62029373 Chenopodium quinoa HOM05D000169 ORTHO05D007693 1.1e-23 113.2 93 55.9
DCAR_004839 Daucus carota HOM05D000169 ORTHO05D007693 1.1e-23 113.2 92 58.7
DCAR_004840 Daucus carota HOM05D000169 ORTHO05D007693 1.1e-23 113.2 92 58.7
Psat3g112240 Pisum sativum HOM05D000162 ORTHO05D000090 2.5e-23 112.1 71 73.2
FAN16G2954 Fragaria x ananassa HOM05D000169 ORTHO05D007693 5.6e-23 110.9 107 49.5
EL10Ac1g01132 Beta vulgaris HOM05D000169 ORTHO05D007693 9.5e-23 110.2 87 57.5
Aqoxy1G00111 Aquilegia oxysepala HOM05D000356 ORTHO05D007693 1.6e-22 109.4 87 58.6
MD05G1272800 Malus domestica HOM05D000169 ORTHO05D007693 8.3e-19 97.1 79 58.2
Sabra11G0141000 Salix brachista HOM05D002312 ORTHO05D006455 5.4e-18 94.4 70 64.3
Ah.04g153410 Amaranthus hybridus HOM05D000169 ORTHO05D007693 1.6e-17 92.8 72 61.1
SEGI_10060 Sequoiadendron giganteum HOM05D000169 ORTHO05D007693 4.6e-17 91.3 87 52.9
CBR_g21135 Chara braunii HOM05D000169 ORTHO05D007693 2.3e-16 89.0 84 51.2
COL.COLO4_26836 Corchorus olitorius HOM05D000169 ORTHO05D007693 1.5e-15 86.3 66 57.6
Zm00001eb261830 Zea mays HOM05D000169 ORTHO05D007693 1.9e-15 85.9 95 46.3
CAN.G79.33 Capsicum annuum HOM05D000169 ORTHO05D007693 9.5e-15 83.6 66 57.6
Solyc02g069750.3 Solanum lycopersicum HOM05D001327 ORTHO05D002270 1.2e-14 83.2 67 58.2
Sopen02g018910 Solanum pennellii HOM05D000169 ORTHO05D007693 1.2e-14 83.2 66 59.1
Mapoly0097s0040 Marchantia polymorpha HOM05D000356 ORTHO05D007693 1.6e-14 82.8 87 46.0
Os08g0130400 Oryza sativa ssp. japonica HOM05D000356 ORTHO05D007693 4.7e-14 81.3 87 47.1
PGSC0003DMG400021130 Solanum tuberosum HOM05D001327 ORTHO05D002270 1.1e-13 80.1 66 56.1
MBI18_g11292_MAGBIO Magnolia biondii HOM05D000169 ORTHO05D007693 9.2e-10 67.0 66 51.5
Pp3c10_3810 Physcomitrium patens HOM05D000169 ORTHO05D007693 1.2e-09 66.6 95 42.1
AagrBONN_evm.TU.Sc2ySwM_228.4712 Anthoceros agrestis HOM05D000169 ORTHO05D007693 7.8e-09 63.9 87 40.2
Medtr0803s0020 Medicago truncatula HOM05D000356 ORTHO05D000265 6.6e-08 60.8 81 37.0


User provided reference genes

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