Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.D00100 Eucalyptus grandis HOM05D004305 ORTHO05D005159 2.7e-248 861.7 482 100.0
Potri.001G464300 Populus trichocarpa HOM05D004305 ORTHO05D005159 2.8e-43 180.6 499 35.5
Sabra11G0141400 Salix brachista HOM05D004305 ORTHO05D005159 3.4e-41 173.7 498 34.7
Sabra16G0315300 Salix brachista HOM05D004305 ORTHO05D005159 2.9e-40 170.6 492 37.6
Sabra16G0313900 Salix brachista HOM05D004305 ORTHO05D005159 1.6e-38 164.9 487 35.5
GSVIVG01021709001 Vitis vinifera HOM05D004305 ORTHO05D005159 1.3e-37 161.8 489 32.9
Ciclev10015182m.g Citrus clementina HOM05D004305 ORTHO05D005159 1.9e-36 157.9 490 33.1
CANSAT35G0942 Cannabis sativa HOM05D004305 ORTHO05D005159 2.5e-36 157.5 523 35.4
Cpa.g.c43226 Carica papaya HOM05D004305 ORTHO05D005159 9.6e-36 155.6 477 33.8
Thecc.06G003200 Theobroma cacao HOM05D004305 ORTHO05D005159 5.3e-34 149.8 480 31.0
Haze_05867 Corylus avellana HOM05D004305 ORTHO05D005159 1.2e-33 148.7 326 37.1
Potri.011G162400 Populus trichocarpa HOM05D004305 ORTHO05D005159 4.5e-33 146.7 505 36.2
Cfa000806 Carpinus fangiana HOM05D004305 ORTHO05D005159 9.9e-33 145.6 361 35.7
Manes.14G124700 Manihot esculenta HOM05D004305 ORTHO05D005159 1.3e-32 145.2 499 31.9
MD05G1269300 Malus domestica HOM05D004305 ORTHO05D005159 1.7e-32 144.8 505 34.1
Atru.chr10.781 Acer truncatum HOM05D004305 ORTHO05D005159 4.9e-32 143.3 479 34.2
CARHR227440 Cardamine hirsuta HOM05D004305 ORTHO05D005159 1.4e-31 141.7 337 36.8
RcHm_v2.0_Chr5g0017411 Rosa chinensis HOM05D004305 ORTHO05D005159 1.6e-30 138.3 481 31.8
BolC7t45599H Brassica oleracea HOM05D004305 ORTHO05D005159 6.0e-30 136.3 345 37.1
AT4G20880 Arabidopsis thaliana HOM05D004305 ORTHO05D005159 1.0e-29 135.6 336 34.8
CSS0026993 Camellia sinensis var. sinensis HOM05D004305 ORTHO05D005159 2.3e-29 134.4 518 29.2
Dinv06927 Davidia involucrata HOM05D004305 ORTHO05D005159 2.3e-29 134.4 373 33.8
MD10G1248100 Malus domestica HOM05D004305 ORTHO05D005159 3.0e-29 134.0 498 33.7
Carub.0007s2055 Capsella rubella HOM05D004305 ORTHO05D005159 1.9e-28 131.3 341 34.0
FvH4_3g10700 Fragaria vesca HOM05D004305 ORTHO05D005159 1.9e-28 131.3 476 30.5
THA.LOC104806249 Tarenaya hassleriana HOM05D004305 ORTHO05D005159 3.3e-28 130.6 332 38.9
ClCG03G008260 Citrullus lanatus HOM05D004305 ORTHO05D005159 5.6e-28 129.8 493 30.4
BcaB03g11678 Brassica carinata HOM05D004305 ORTHO05D005159 7.4e-28 129.4 332 34.6
BcaNung04140 Brassica carinata HOM05D004305 ORTHO05D005159 7.4e-28 129.4 466 32.4
FAN11G3528 Fragaria x ananassa HOM05D004305 ORTHO05D005159 1.3e-27 128.6 479 30.9
Lalb_Chr07g0189031 Lupinus albus HOM05D004305 ORTHO05D005159 1.3e-27 128.6 484 29.8
Manes.06G058700 Manihot esculenta HOM05D004305 ORTHO05D005159 1.3e-27 128.6 494 29.4
AL7G33270 Arabidopsis lyrata HOM05D004305 ORTHO05D005159 2.1e-27 127.9 342 36.3
BcaNung07356 Brassica carinata HOM05D004305 ORTHO05D005159 2.1e-27 127.9 339 34.2
Duzib192G0088 Durio zibethinus HOM05D004305 ORTHO05D005159 3.7e-27 127.1 467 30.2
Prupe.4G095400 Prunus persica HOM05D004305 ORTHO05D005159 3.7e-27 127.1 542 30.8
Aa31LG6G2950 Aethionema arabicum HOM05D004305 ORTHO05D005159 8.1e-27 125.9 356 32.0
BcaNung05413 Brassica carinata HOM05D004305 ORTHO05D005159 1.4e-26 125.2 345 35.1
C07p50970 Brassica napus HOM05D004305 ORTHO05D005159 1.4e-26 125.2 345 35.1
Duzib235G0167 Durio zibethinus HOM05D004305 ORTHO05D005159 1.4e-26 125.2 477 30.2
Sp7g18970 Schrenkiella parvula HOM05D004305 ORTHO05D005159 1.4e-26 125.2 480 30.0
A03p52530 Brassica napus HOM05D004305 ORTHO05D005159 4.0e-26 123.6 352 35.2
MSTRG.7546 Avicennia marina HOM05D004305 ORTHO05D005159 5.3e-26 123.2 493 29.6
TWI15G0126 Tripterygium wilfordii HOM05D004305 ORTHO05D005159 5.3e-26 123.2 473 30.2
Lj4g0027556 Lotus japonicus HOM05D004305 ORTHO05D005159 1.2e-25 122.1 480 31.2
THA.LOC104812214 Tarenaya hassleriana HOM05D004305 ORTHO05D005159 1.2e-25 122.1 474 32.9
A01p12300 Brassica napus HOM05D004305 ORTHO05D005159 5.8e-25 119.8 467 30.6
BraA03t14328Z Brassica rapa HOM05D004305 ORTHO05D005159 5.8e-25 119.8 343 34.4
C01p14710 Brassica napus HOM05D004305 ORTHO05D005159 7.6e-25 119.4 474 30.0
BolC1t01423H Brassica oleracea HOM05D004305 ORTHO05D005159 7.6e-25 119.4 474 30.0
QL93p0201_0023 Quercus lobata HOM05D004305 ORTHO05D005159 7.6e-25 119.4 496 30.2
COL.COLO4_26846 Corchorus olitorius HOM05D004305 ORTHO05D005159 2.2e-24 117.9 219 39.3
QL05p063597 Quercus lobata HOM05D004305 ORTHO05D005159 2.2e-24 117.9 485 32.0
CsaV3_1G037140 Cucumis sativus L. HOM05D004305 ORTHO05D005159 2.9e-24 117.5 498 30.1
FAN16G1832 Fragaria x ananassa HOM05D004305 ORTHO05D005159 2.9e-24 117.5 475 30.3
Gorai.010G144500 Gossypium raimondii HOM05D004305 ORTHO05D005159 4.9e-24 116.7 469 27.3
Lj1P1160T59 Lonicera japonica HOM05D004305 ORTHO05D005159 4.9e-24 116.7 471 30.6
PGR083G0011 Punica granatum HOM05D004305 ORTHO05D005159 8.4e-24 115.9 354 34.5
Gohir.D06G124500 Gossypium hirsutum HOM05D004305 ORTHO05D005159 1.1e-23 115.5 469 27.3
BolC3t20584H Brassica oleracea HOM05D004305 ORTHO05D005159 1.4e-23 115.2 199 42.7
BraA01t01174Z Brassica rapa HOM05D004305 ORTHO05D005159 1.4e-23 115.2 466 29.6
FAN21G2878 Fragaria x ananassa HOM05D004305 ORTHO05D005159 1.9e-23 114.8 469 30.3
MELO3C007060.2 Cucumis melo HOM05D004305 ORTHO05D005159 3.2e-23 114.0 350 32.9
Thhalv10025304m.g Eutrema salsugineum HOM05D004305 ORTHO05D005159 3.2e-23 114.0 338 37.3
BcaC09g51296 Brassica carinata HOM05D004305 ORTHO05D005159 4.2e-23 113.6 470 30.6
Actinidia13459 Actinidia chinensis HOM05D004305 ORTHO05D005159 5.5e-23 113.2 387 30.2
A08p14960 Brassica napus HOM05D004305 ORTHO05D005159 5.5e-23 113.2 199 41.2
BraA08t33477Z Brassica rapa HOM05D004305 ORTHO05D005159 5.5e-23 113.2 199 41.2
CiPaw.09G142800 Carya illinoinensis HOM05D004305 ORTHO05D005159 9.3e-23 112.5 324 37.3
TWI38G0672 Tripterygium wilfordii HOM05D004305 ORTHO05D005159 9.3e-23 112.5 473 29.6
Gohir.A06G119900 Gossypium hirsutum HOM05D004305 ORTHO05D005159 2.1e-22 111.3 465 27.3
MELO3C002832.2 Cucumis melo HOM05D004305 ORTHO05D005159 2.7e-22 110.9 485 28.2
MSTRG.16299 Avicennia marina HOM05D004305 ORTHO05D005159 6.0e-22 109.8 495 29.1
Oeu015165.2 Olea europaea HOM05D004305 ORTHO05D005159 6.0e-22 109.8 473 32.1
Oeu041117.1 Olea europaea HOM05D004305 ORTHO05D005159 6.0e-22 109.8 478 30.3
Oeu060316.1 Olea europaea HOM05D004305 ORTHO05D005159 1.0e-21 109.0 483 28.4
BcaC01g00679 Brassica carinata HOM05D004305 ORTHO05D005159 3.0e-21 107.5 199 40.7
C03p83040 Brassica napus HOM05D004305 ORTHO05D005159 3.0e-21 107.5 199 40.7
Actinidia31373 Actinidia chinensis HOM05D004305 ORTHO05D005159 3.9e-21 107.1 207 44.9
Sc03g0008520 Simmondsia chinensis HOM05D004305 ORTHO05D005159 5.1e-21 106.7 201 45.3
ClCG01G025280 Citrullus lanatus HOM05D004305 ORTHO05D005159 8.7e-21 105.9 347 30.3
Oeu040075.1 Olea europaea HOM05D004305 ORTHO05D005159 8.7e-21 105.9 342 31.3
Rhsim02G0163100 Rhododendron simsii HOM05D004305 ORTHO05D005159 1.5e-20 105.1 202 39.1
Sed0024509 Sechium edule HOM05D004305 ORTHO05D005159 7.4e-20 102.8 192 40.6
FAN25G2552 Fragaria x ananassa HOM05D004305 ORTHO05D005159 2.1e-19 101.3 499 29.1
SGA_v2.0_scaffold1G00275 Striga asiatica HOM05D004305 ORTHO05D005159 2.1e-19 101.3 346 30.6
Migut.M01906 Erythranthe guttata HOM05D004305 ORTHO05D005159 2.8e-19 100.9 475 29.5
Ca_00869_v3 Cicer arietinum L. HOM05D004305 ORTHO05D005159 3.7e-19 100.5 217 45.6
CsaV3_6G052500 Cucumis sativus L. HOM05D004305 ORTHO05D005159 3.7e-19 100.5 349 31.2
Nn1g03508 Nelumbo nucifera HOM05D004305 ORTHO05D005159 4.8e-19 100.1 490 27.1
Psat1g165840 Pisum sativum HOM05D004305 ORTHO05D005159 4.8e-19 100.1 194 39.7
Lalb_Chr18g0058121 Lupinus albus HOM05D004305 ORTHO05D005159 3.1e-18 97.4 203 45.3
Sp2g09190 Schrenkiella parvula HOM05D004305 ORTHO05D005159 4.1e-18 97.1 184 39.7
CARHR178780 Cardamine hirsuta HOM05D004305 ORTHO05D005159 5.3e-18 96.7 200 37.0
BcaB07g30530 Brassica carinata HOM05D004305 ORTHO05D005159 6.9e-18 96.3 188 39.4
MBI02_g39880_MAGBIO Magnolia biondii HOM05D004305 ORTHO05D005159 6.9e-18 96.3 188 37.8
Medtr2g031350 Medicago truncatula HOM05D004305 ORTHO05D005159 6.9e-18 96.3 203 37.4
PGSC0003DMG400021011 Solanum tuberosum HOM05D004305 ORTHO05D005159 6.9e-18 96.3 489 28.4
Thhalv10003311m.g Eutrema salsugineum HOM05D004305 ORTHO05D005159 2.6e-17 94.4 199 39.2
Nn1g07139 Nelumbo nucifera HOM05D004305 ORTHO05D005159 1.7e-16 91.7 205 37.1
Phvul.006G126000 Phaseolus vulgaris HOM05D004305 ORTHO05D005159 1.7e-16 91.7 184 37.0
A02p28380 Brassica napus HOM05D004305 ORTHO05D005159 2.9e-16 90.9 188 38.3
SGA_v2.0_scaffold223G42870 Striga asiatica HOM05D004305 ORTHO05D005159 3.8e-16 90.5 197 38.1
HanXRQChr08g0237311 Helianthus annuus HOM05D004305 ORTHO05D005159 5.0e-16 90.1 196 37.2
AUR62014849 Chenopodium quinoa HOM05D002349 ORTHO05D002464 8.4e-16 89.4 57 73.7
Glyma.09G026200 Glycine max HOM05D004305 ORTHO05D005159 1.9e-15 88.2 183 45.4
unitig_748.g8282 Utricularia gibba HOM05D004305 ORTHO05D005159 1.9e-15 88.2 200 39.0
BraA09t37708Z Brassica rapa HOM05D004305 ORTHO05D005159 2.5e-15 87.8 232 32.3
DCAR_003840 Daucus carota HOM05D004305 ORTHO05D005159 3.2e-15 87.4 465 26.9
unitig_32.g10874 Utricularia gibba HOM05D004305 ORTHO05D005159 3.2e-15 87.4 190 34.2
BcaC04g21838 Brassica carinata HOM05D004305 ORTHO05D005159 5.5e-15 86.7 191 36.1
C09p26810 Brassica napus HOM05D004305 ORTHO05D005159 5.5e-15 86.7 191 36.1
BolC9t55570H Brassica oleracea HOM05D004305 ORTHO05D005159 5.5e-15 86.7 197 36.0
PGSC0003DMG400021114 Solanum tuberosum HOM05D004305 ORTHO05D005159 5.5e-15 86.7 217 36.9
EL10Ac4g07786 Beta vulgaris HOM05D023924 ORTHO05D023401 7.2e-15 86.3 262 29.8
Sopen02g006550 Solanum pennellii HOM05D004305 ORTHO05D005159 7.2e-15 86.3 202 35.1
A09p21070 Brassica napus HOM05D004305 ORTHO05D005159 9.3e-15 85.9 195 34.9
Peaxi162Scf00395g00054 Petunia axillaris HOM05D004305 ORTHO05D005159 9.3e-15 85.9 473 27.3
BraA02t07875Z Brassica rapa HOM05D004305 ORTHO05D005159 1.2e-14 85.5 192 35.4
Solyc02g022920.1 Solanum lycopersicum HOM05D004305 ORTHO05D005159 2.1e-14 84.7 470 27.2
C07p27080 Brassica napus HOM05D004305 ORTHO05D005159 7.9e-14 82.8 191 34.6
Lsat_1_v5_gn_9_25860 Lactuca sativa HOM05D004305 ORTHO05D005159 7.9e-14 82.8 214 35.5
VMungo0540G0062 Vigna mungo HOM05D004305 ORTHO05D005159 7.9e-14 82.8 477 27.0
BcaB07g30950 Brassica carinata HOM05D004305 ORTHO05D005159 1.0e-13 82.4 204 34.8
BcaC06g31624 Brassica carinata HOM05D004305 ORTHO05D005159 1.0e-13 82.4 191 35.1
Glyma.15G132400 Glycine max HOM05D004305 ORTHO05D005159 1.0e-13 82.4 408 29.9
BcaC06g34566 Brassica carinata HOM05D004305 ORTHO05D005159 1.3e-13 82.0 191 34.6
Sopen02g019200 Solanum pennellii HOM05D004305 ORTHO05D005159 1.3e-13 82.0 217 33.2
PSO675G0053 Papaver somniferum HOM05D004305 ORTHO05D005159 2.3e-13 81.3 507 25.0
Nitab4.5_0001583g0210 Nicotiana tabacum HOM05D004305 ORTHO05D005159 3.0e-13 80.9 195 34.4
Solyc02g070040.1 Solanum lycopersicum HOM05D004305 ORTHO05D005159 3.0e-13 80.9 217 32.7
BraA06t27598Z Brassica rapa HOM05D004305 ORTHO05D005159 3.9e-13 80.5 191 36.1
Sed0021635 Sechium edule HOM05D004305 ORTHO05D005159 6.7e-13 79.7 343 28.0
AT5G44350 Arabidopsis thaliana HOM05D004305 ORTHO05D005159 1.1e-12 79.0 183 37.2
BolC7t43238H Brassica oleracea HOM05D004305 ORTHO05D005159 1.9e-12 78.2 191 34.6
BcaC03g16656 Brassica carinata HOM05D004305 ORTHO05D005159 2.5e-12 77.8 191 35.6
Cc09_g07570 Coffea canephora HOM05D004305 ORTHO05D005159 2.5e-12 77.8 484 28.3
Nitab4.5_0004204g0010 Nicotiana tabacum HOM05D004305 ORTHO05D005159 2.5e-12 77.8 499 27.5
Lj6g0010125 Lotus japonicus HOM05D004305 ORTHO05D005159 3.3e-12 77.4 398 29.1
Carub.0008s0412 Capsella rubella HOM05D004305 ORTHO05D005159 7.4e-12 76.3 186 36.6
CDE02G2479 Ceratophyllum demersum HOM05D006189 ORTHO05D007765 3.7e-11 73.9 56 66.1
Nitab4.5_0000076g0140 Nicotiana tabacum HOM05D004305 ORTHO05D005159 4.8e-11 73.6 482 28.4
unitig_748.g7348 Utricularia gibba HOM05D004305 ORTHO05D005159 6.3e-11 73.2 197 34.5
AL8G15540 Arabidopsis lyrata HOM05D004305 ORTHO05D005159 8.2e-11 72.8 188 36.7
SHI24805 Sapria himalayana HOM05D004305 ORTHO05D005159 8.2e-11 72.8 60 58.3
Actinidia32347 Actinidia chinensis HOM05D004305 ORTHO05D005159 2.4e-10 71.2 213 38.5
A06p47270 Brassica napus HOM05D004305 ORTHO05D005159 6.9e-10 69.7 191 33.0
ECA247G2099 Erigeron canadensis HOM05D004305 ORTHO05D005159 2.0e-09 68.2 55 61.8
Psat7g094000 Pisum sativum HOM05D004305 ORTHO05D005159 2.0e-09 68.2 188 30.3
Medtr4g094532 Medicago truncatula HOM05D004305 ORTHO05D005159 2.6e-09 67.8 187 35.3
BolC2t10530H Brassica oleracea HOM05D004305 ORTHO05D005159 5.9e-09 66.6 179 35.2
Ah.04g165990 Amaranthus hybridus HOM05D023924 ORTHO05D023401 2.2e-08 64.7 576 23.8
Nn2g11492 Nelumbo nucifera HOM05D004305 ORTHO05D005159 2.2e-08 64.7 57 50.9
Sed0021177 Sechium edule HOM05D004305 ORTHO05D005159 8.5e-08 62.8 56 60.7
TPR.G30380 Trifolium pratense HOM05D004305 ORTHO05D005159 1.9e-07 61.6 190 34.2
unitig_32.g11679 Utricularia gibba HOM05D004305 ORTHO05D005159 9.4e-07 59.3 60 51.7


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