Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.D00091 Eucalyptus grandis HOM05D005129 ORTHO05D005585 5.0e-70 267.7 140 100.0
PGR083G2529 Punica granatum HOM05D005129 ORTHO05D005585 1.3e-28 130.2 142 50.0
Prupe.4G095800 Prunus persica HOM05D005129 ORTHO05D005585 1.1e-27 127.1 140 49.3
Cfa000799 Carpinus fangiana HOM05D005129 ORTHO05D005585 2.4e-27 125.9 138 50.7
Haze_05902 Corylus avellana HOM05D005129 ORTHO05D005585 2.6e-26 122.5 134 50.7
Potri.011G161901 Populus trichocarpa HOM05D005129 ORTHO05D005585 7.6e-26 120.9 139 48.2
QL05p063822 Quercus lobata HOM05D005129 ORTHO05D005585 1.3e-25 120.2 136 47.1
Dinv27171 Davidia involucrata HOM05D005129 ORTHO05D005585 2.2e-25 119.4 134 50.0
FAN16G1113 Fragaria x ananassa HOM05D005129 ORTHO05D005585 1.1e-24 117.1 141 44.7
FvH4_3g10781 Fragaria vesca HOM05D005129 ORTHO05D005585 4.2e-24 115.2 141 44.0
FAN11G1468 Fragaria x ananassa HOM05D005129 ORTHO05D005585 9.3e-24 114.0 141 43.3
FAN21G1521 Fragaria x ananassa HOM05D005129 ORTHO05D005585 9.3e-24 114.0 141 43.3
Atru.chr3.3029 Acer truncatum HOM05D005129 ORTHO05D005585 2.1e-23 112.8 136 45.6
FAN25G2195 Fragaria x ananassa HOM05D005129 ORTHO05D005585 2.7e-23 112.5 141 43.3
Sabra11G0141700 Salix brachista HOM05D005129 ORTHO05D005585 1.3e-22 110.2 139 43.9
MD10G1247500 Malus domestica HOM05D005129 ORTHO05D005585 1.8e-22 109.8 138 44.2
TAR626G1389 Trochodendron aralioides HOM05D005129 ORTHO05D005585 1.8e-22 109.8 139 46.0
Potri.001G463700 Populus trichocarpa HOM05D005129 ORTHO05D005585 3.0e-22 109.0 139 44.6
CSS0016153 Camellia sinensis var. sinensis HOM05D005129 ORTHO05D005585 3.9e-22 108.6 141 44.7
RcHm_v2.0_Chr5g0017511 Rosa chinensis HOM05D005129 ORTHO05D005585 1.9e-21 106.3 141 41.1
TAR633G0821 Trochodendron aralioides HOM05D005129 ORTHO05D005585 1.9e-21 106.3 139 44.6
MD05G1268800 Malus domestica HOM05D005129 ORTHO05D005585 3.3e-21 105.5 137 43.8
Manes.06G058900 Manihot esculenta HOM05D005129 ORTHO05D005585 4.3e-21 105.1 136 43.4
MBI18_g10016_MAGBIO Magnolia biondii HOM05D005129 ORTHO05D005585 5.6e-21 104.8 133 45.1
Ciclev10014031m.g Citrus clementina HOM05D005129 ORTHO05D005585 1.3e-20 103.6 136 40.4
LjContig00049g0025087 Lotus japonicus HOM05D005129 ORTHO05D005585 1.3e-20 103.6 134 43.3
Thecc.06G015200 Theobroma cacao HOM05D005129 ORTHO05D005585 1.6e-20 103.2 136 42.6
Cpa.g.sc166.48 Carica papaya HOM05D005129 ORTHO05D005585 2.8e-20 102.4 135 39.3
Migut.M00948 Erythranthe guttata HOM05D005129 ORTHO05D005585 2.8e-20 102.4 126 46.8
Gohir.A10G007300 Gossypium hirsutum HOM05D005129 ORTHO05D005585 4.8e-20 101.7 132 43.2
CiPaw.16G039600 Carya illinoinensis HOM05D005129 ORTHO05D005585 6.2e-20 101.3 132 42.4
CANSAT35G1118 Cannabis sativa HOM05D005129 ORTHO05D005585 8.1e-20 100.9 139 39.6
Gohir.D10G007200 Gossypium hirsutum HOM05D005129 ORTHO05D005585 1.4e-19 100.1 132 42.4
Aqoxy1G02020_Aqoxy1G02021 Aquilegia oxysepala HOM05D005129 ORTHO05D005585 4.0e-19 98.6 124 45.2
BcaC02g11559 Brassica carinata HOM05D005129 ORTHO05D005585 4.0e-19 98.6 139 41.0
Ca_00871_v3 Cicer arietinum L. HOM05D005129 ORTHO05D005585 5.3e-19 98.2 135 40.7
Gorai.011G007900 Gossypium raimondii HOM05D005129 ORTHO05D005585 6.9e-19 97.8 132 40.9
Actinidia00605 Actinidia chinensis HOM05D005129 ORTHO05D005585 9.0e-19 97.4 139 38.8
C04p13980 Brassica napus HOM05D005129 ORTHO05D005585 1.2e-18 97.1 139 40.3
BolC4t22987H Brassica oleracea HOM05D005129 ORTHO05D005585 1.2e-18 97.1 139 40.3
Gohir.A05G112850 Gossypium hirsutum HOM05D005129 ORTHO05D005585 1.2e-18 97.1 137 40.9
Glyma.14G032500 Glycine max HOM05D005129 ORTHO05D005585 2.0e-18 96.3 132 40.2
Gohir.D05G113300 Gossypium hirsutum HOM05D005129 ORTHO05D005585 2.6e-18 95.9 137 40.1
Gorai.009G117400 Gossypium raimondii HOM05D005129 ORTHO05D005585 2.6e-18 95.9 137 40.1
Medtr2g031380 Medicago truncatula HOM05D005129 ORTHO05D005585 3.4e-18 95.5 134 41.0
Nn1g08322 Nelumbo nucifera HOM05D005129 ORTHO05D005585 3.4e-18 95.5 130 40.8
TWI63G1468 Tripterygium wilfordii HOM05D005129 ORTHO05D005585 3.4e-18 95.5 135 40.7
ClCG03G008270 Citrullus lanatus HOM05D005129 ORTHO05D005585 4.5e-18 95.1 134 43.3
Lalb_Chr04g0249051 Lupinus albus HOM05D005129 ORTHO05D005585 4.5e-18 95.1 133 40.6
A05p10880 Brassica napus HOM05D005129 ORTHO05D005585 5.8e-18 94.7 136 41.2
Sp4g17070 Schrenkiella parvula HOM05D005129 ORTHO05D005585 5.8e-18 94.7 139 38.8
BraA05t20033Z Brassica rapa HOM05D005129 ORTHO05D005585 7.6e-18 94.4 136 40.4
CsaV3_1G037120 Cucumis sativus L. HOM05D005129 ORTHO05D005585 7.6e-18 94.4 132 43.9
Glyma.02G281900 Glycine max HOM05D005129 ORTHO05D005585 7.6e-18 94.4 131 38.2
BcaB02g09508 Brassica carinata HOM05D005129 ORTHO05D005585 1.3e-17 93.6 136 41.2
VMungo0647G0154 Vigna mungo HOM05D005129 ORTHO05D005585 1.3e-17 93.6 128 40.6
MELO3C002837.2 Cucumis melo HOM05D005129 ORTHO05D005585 1.7e-17 93.2 132 43.2
Sed0027997 Sechium edule HOM05D005129 ORTHO05D005585 1.7e-17 93.2 133 42.9
BcaC01g05762 Brassica carinata HOM05D005129 ORTHO05D005585 2.2e-17 92.8 139 36.7
CARHR128940 Cardamine hirsuta HOM05D005129 ORTHO05D005585 2.2e-17 92.8 140 37.9
TPR.G8782 Trifolium pratense HOM05D000048 ORTHO05D004674 2.2e-17 92.8 128 35.2
Thhalv10016158m.g Eutrema salsugineum HOM05D005129 ORTHO05D005585 2.9e-17 92.4 142 37.3
GSVIVG01035591001 Vitis vinifera HOM05D005129 ORTHO05D005585 2.9e-17 92.4 139 36.0
BcaB06g28799 Brassica carinata HOM05D005129 ORTHO05D005585 3.8e-17 92.0 139 37.4
Rhsim06G0213800 Rhododendron simsii HOM05D005129 ORTHO05D005585 6.5e-17 91.3 141 35.5
Sopen02g006450 Solanum pennellii HOM05D005129 ORTHO05D005585 6.5e-17 91.3 126 42.9
Oeu046929.1 Olea europaea HOM05D005129 ORTHO05D005585 8.4e-17 90.9 137 43.1
Lj1C1160T1 Lonicera japonica HOM05D005129 ORTHO05D005585 1.1e-16 90.5 137 36.5
TPR.G22269 Trifolium pratense HOM05D005129 ORTHO05D005585 1.1e-16 90.5 133 40.6
Phvul.008G197100 Phaseolus vulgaris HOM05D005129 ORTHO05D005585 1.4e-16 90.1 131 38.2
Solyc02g022870.4 Solanum lycopersicum HOM05D005129 ORTHO05D005585 1.9e-16 89.7 126 42.1
vmacro03361 Vaccinium macrocarpon HOM05D005129 ORTHO05D005585 2.5e-16 89.4 111 43.2
Rhsim03G0093400 Rhododendron simsii HOM05D005129 ORTHO05D005585 3.2e-16 89.0 136 38.2
THA.LOC104812690 Tarenaya hassleriana HOM05D005129 ORTHO05D005585 3.2e-16 89.0 140 36.4
AL4G30770 Arabidopsis lyrata HOM05D005129 ORTHO05D005585 9.3e-16 87.4 139 36.0
AT2G34780 Arabidopsis thaliana HOM05D005129 ORTHO05D005585 9.3e-16 87.4 139 36.0
arahy.Tifrunner.gnm1.ann1.40GDTE Arachis hypogaea HOM05D005129 ORTHO05D005585 9.3e-16 87.4 136 36.0
Solyc07g041330.3 Solanum lycopersicum HOM05D005129 ORTHO05D005585 9.3e-16 87.4 123 43.1
MELO3C005104.2 Cucumis melo HOM05D005129 ORTHO05D005585 1.2e-15 87.0 106 47.2
SalBow8G1057 Salvia bowleyana HOM05D005129 ORTHO05D005585 2.1e-15 86.3 127 38.6
ATR0763G237 Amborella trichopoda HOM05D005129 ORTHO05D005585 2.7e-15 85.9 128 36.7
arahy.Tifrunner.gnm1.ann1.LUZ6WJ Arachis hypogaea HOM05D005129 ORTHO05D005585 2.7e-15 85.9 143 34.3
Carub.0004s1647 Capsella rubella HOM05D005129 ORTHO05D005585 3.5e-15 85.5 136 37.5
Cc09_g07500 Coffea canephora HOM05D005129 ORTHO05D005585 4.6e-15 85.1 139 36.7
Sopen07g020720 Solanum pennellii HOM05D005129 ORTHO05D005585 4.6e-15 85.1 123 42.3
Nitab4.5_0000076g0130 Nicotiana tabacum HOM05D005129 ORTHO05D005585 7.9e-15 84.3 127 40.2
HPP92_022551 Vanilla planifolia HOM05D005129 ORTHO05D005585 1.0e-14 84.0 115 43.5
BraA04t18160Z Brassica rapa HOM05D002581 ORTHO05D002828 1.8e-14 83.2 136 38.2
Nitab4.5_0002094g0030 Nicotiana tabacum HOM05D005129 ORTHO05D005585 2.3e-14 82.8 127 39.4
PSO541G3520 Papaver somniferum HOM05D005129 ORTHO05D005585 2.3e-14 82.8 133 41.4
Medtr5g090200 Medicago truncatula HOM05D005129 ORTHO05D005585 3.0e-14 82.4 137 32.8
Aa31LG10G6520 Aethionema arabicum HOM05D005129 ORTHO05D005585 3.9e-14 82.0 137 33.6
A04p26560 Brassica napus HOM05D002581 ORTHO05D002828 8.7e-14 80.9 136 37.5
FAN25G0785 Fragaria x ananassa HOM05D005129 ORTHO05D005585 8.7e-14 80.9 100 43.0
Peaxi162Scf01909g00118 Petunia axillaris HOM05D005129 ORTHO05D005585 1.1e-13 80.5 126 40.5
HanXRQChr03g0080681 Helianthus annuus HOM05D005129 ORTHO05D005585 1.5e-13 80.1 133 34.6
ECA246G0263 Erigeron canadensis HOM05D005129 ORTHO05D005585 4.3e-13 78.6 141 38.3
C04p63980 Brassica napus HOM05D002581 ORTHO05D002828 2.1e-12 76.3 131 38.2
Lsat_1_v5_gn_3_43520 Lactuca sativa HOM05D005129 ORTHO05D005585 3.7e-12 75.5 134 35.8
SGA_v2.0_scaffold1G00142 Striga asiatica HOM05D005129 ORTHO05D005585 1.4e-11 73.6 130 34.6
EL10Ac3g05106 Beta vulgaris HOM05D005129 ORTHO05D005585 5.3e-11 71.6 138 37.7
AUR62005921 Chenopodium quinoa HOM05D005129 ORTHO05D005585 5.3e-11 71.6 136 35.3
AUR62028142 Chenopodium quinoa HOM05D005129 ORTHO05D005585 5.3e-11 71.6 136 35.3
DCAR_003834 Daucus carota HOM05D005129 ORTHO05D005585 5.3e-11 71.6 91 45.1
CiPaw.09G143100 Carya illinoinensis HOM05D005129 ORTHO05D005585 2.0e-10 69.7 62 53.2
Os01g0768700 Oryza sativa ssp. japonica HOM05D005129 ORTHO05D005585 2.5e-08 62.8 126 29.4
unitig_748.g7646 Utricularia gibba HOM05D005129 ORTHO05D005585 5.5e-08 61.6 127 31.5
SHI24815 Sapria himalayana HOM05D005129 ORTHO05D005585 2.1e-07 59.7 120 35.8


User provided reference genes

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