Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.D00006 Eucalyptus grandis HOM05D005725 ORTHO05D007531 9.2e-300 1032.7 501 100.0
Dinv17876 Davidia involucrata HOM05D005725 ORTHO05D007531 3.5e-158 562.4 520 55.4
Manes.03G071900 Manihot esculenta HOM05D005725 ORTHO05D007531 5.7e-148 528.5 517 53.8
Potri.001G075300 Populus trichocarpa HOM05D005725 ORTHO05D007531 7.4e-148 528.1 512 53.7
RcHm_v2.0_Chr5g0021701 Rosa chinensis HOM05D005725 ORTHO05D007531 1.4e-146 523.9 509 52.5
GSVIVG01010083001 Vitis vinifera HOM05D005725 ORTHO05D007531 2.9e-144 516.2 517 52.4
CiPaw.10G107600 Carya illinoinensis HOM05D005725 ORTHO05D007531 8.5e-144 514.6 533 52.7
CANSAT54G1139 Cannabis sativa HOM05D005725 ORTHO05D007531 1.5e-140 503.8 514 52.7
Thecc.02G002000 Theobroma cacao HOM05D005725 ORTHO05D007531 1.3e-139 500.7 513 52.4
TWI38G1126 Tripterygium wilfordii HOM05D005725 ORTHO05D007531 2.2e-139 500.0 514 52.9
Prupe.4G119800 Prunus persica HOM05D005725 ORTHO05D007531 3.7e-139 499.2 512 51.2
Nn7g38404 Nelumbo nucifera HOM05D005725 ORTHO05D007531 6.3e-139 498.4 527 50.1
Cfa001153 Carpinus fangiana HOM05D005725 ORTHO05D007531 4.1e-138 495.7 457 55.6
PGR004G2791 Punica granatum HOM05D005725 ORTHO05D007531 5.3e-138 495.4 510 53.3
COL.COLO4_25036 Corchorus olitorius HOM05D005725 ORTHO05D007531 1.2e-137 494.2 513 52.4
FvH4_3g13240 Fragaria vesca HOM05D005725 ORTHO05D007531 1.2e-137 494.2 511 49.7
Aqoxy1G01377 Aquilegia oxysepala HOM05D005725 ORTHO05D007531 7.2e-135 485.0 527 49.7
MELO3C007000.2 Cucumis melo HOM05D005725 ORTHO05D007531 6.1e-134 481.9 515 49.3
MD05G1243800 Malus domestica HOM05D005725 ORTHO05D007531 2.3e-133 479.9 518 50.0
Atru.chr10.248 Acer truncatum HOM05D005725 ORTHO05D007531 3.1e-130 469.5 504 50.2
Duzib132G0485 Durio zibethinus HOM05D005725 ORTHO05D007531 2.1e-126 456.8 519 48.6
FAN21G2681 Fragaria x ananassa HOM05D005725 ORTHO05D007531 2.7e-126 456.4 470 50.6
FAN11G2553 Fragaria x ananassa HOM05D005725 ORTHO05D007531 3.6e-126 456.1 502 48.4
Lalb_Chr18g0051971 Lupinus albus HOM05D005725 ORTHO05D007531 6.1e-126 455.3 513 47.8
Sopen01g016500 Solanum pennellii HOM05D005725 ORTHO05D007531 6.3e-123 445.3 509 47.2
Lj6g0004794 Lotus japonicus HOM05D005725 ORTHO05D007531 1.8e-122 443.7 521 48.4
Sabra01G0053700 Salix brachista HOM05D005725 ORTHO05D007531 4.1e-122 442.6 644 41.8
Gorai.007G055200 Gossypium raimondii HOM05D005725 ORTHO05D007531 5.3e-122 442.2 521 48.9
VMungo1309G0521 Vigna mungo HOM05D005725 ORTHO05D007531 9.1e-122 441.4 519 47.8
Glyma.15G155900 Glycine max HOM05D005725 ORTHO05D007531 1.2e-121 441.0 516 48.3
Gohir.A11G047200 Gossypium hirsutum HOM05D005725 ORTHO05D007531 1.6e-121 440.7 518 48.5
FAN16G0048 Fragaria x ananassa HOM05D005725 ORTHO05D007531 2.0e-121 440.3 462 49.8
Gohir.D11G050800 Gossypium hirsutum HOM05D005725 ORTHO05D007531 3.5e-121 439.5 521 48.8
Solyc01g021640.3 Solanum lycopersicum HOM05D005725 ORTHO05D007531 1.3e-120 437.6 509 46.4
TPR.G30931 Trifolium pratense HOM05D005725 ORTHO05D007531 2.9e-120 436.4 513 46.8
Medtr2g437810 Medicago truncatula HOM05D005725 ORTHO05D007531 3.2e-119 433.0 518 46.1
Phvul.009G244300 Phaseolus vulgaris HOM05D005725 ORTHO05D007531 4.2e-119 432.6 513 47.6
Psat1g151080 Pisum sativum HOM05D005725 ORTHO05D007531 1.2e-118 431.0 520 46.2
Ah.03g147910 Amaranthus hybridus HOM05D005725 ORTHO05D007531 2.3e-117 426.8 510 46.3
ClCG01G025890 Citrullus lanatus HOM05D005725 ORTHO05D007531 1.5e-116 424.1 490 46.7
PSO541G5061 Papaver somniferum HOM05D005725 ORTHO05D007531 2.6e-116 423.3 459 50.8
AUR62003571 Chenopodium quinoa HOM05D005725 ORTHO05D007531 2.8e-115 419.9 512 45.9
HanXRQChr09g0257851 Helianthus annuus HOM05D005725 ORTHO05D007531 3.7e-115 419.5 519 45.7
ECA232G4493 Erigeron canadensis HOM05D005725 ORTHO05D007531 3.1e-114 416.4 510 45.7
Peaxi162Scf00378g00520 Petunia axillaris HOM05D005725 ORTHO05D007531 3.1e-114 416.4 510 46.5
CsaV3_6G053120 Cucumis sativus L. HOM05D005725 ORTHO05D007531 5.3e-114 415.6 421 51.1
Glyma.09G048600 Glycine max HOM05D005725 ORTHO05D007531 1.6e-113 414.1 516 46.1
DCAR_001262 Daucus carota HOM05D005725 ORTHO05D007531 2.2e-112 410.2 527 45.7
arahy.Tifrunner.gnm1.ann1.2M6VYA Arachis hypogaea HOM05D005725 ORTHO05D007531 2.9e-112 409.8 523 45.9
FAN25G0714 Fragaria x ananassa HOM05D005725 ORTHO05D007531 4.0e-109 399.4 458 46.9
MSTRG.16376 Avicennia marina HOM05D005725 ORTHO05D007531 8.3e-107 391.7 512 43.2
AL6G28440 Arabidopsis lyrata HOM05D005725 ORTHO05D007531 7.7e-105 385.2 508 45.1
Carub.0006s1558 Capsella rubella HOM05D005725 ORTHO05D007531 1.7e-104 384.0 509 45.8
TAR626G0027 Trochodendron aralioides HOM05D005725 ORTHO05D007531 2.9e-104 383.3 360 54.2
Cc09_g04730 Coffea canephora HOM05D005725 ORTHO05D007531 1.1e-103 381.3 523 43.6
QL11p011022 Quercus lobata HOM05D005725 ORTHO05D007531 1.1e-103 381.3 878 31.8
Ca_02400_v3 Cicer arietinum L. HOM05D005725 ORTHO05D007531 2.0e-100 370.5 509 43.8
Hund26771 Selenicereus undatus HOM05D005725 ORTHO05D007531 2.6e-100 370.2 456 44.1
AT5G17370 Arabidopsis thaliana HOM05D005725 ORTHO05D007531 5.7e-100 369.0 474 46.2
BcaC03g18554 Brassica carinata HOM05D005725 ORTHO05D007531 8.3e-99 365.2 521 44.3
vmacro03566 Vaccinium macrocarpon HOM05D005725 ORTHO05D007531 3.2e-98 363.2 656 37.7
BcaB05g23263 Brassica carinata HOM05D005725 ORTHO05D007531 4.1e-98 362.8 525 45.0
A02p04160 Brassica napus HOM05D005725 ORTHO05D007531 7.0e-98 362.1 523 44.7
Sed0022851 Sechium edule HOM05D005725 ORTHO05D007531 7.0e-98 362.1 390 48.7
BolC2t06810H Brassica oleracea HOM05D005725 ORTHO05D007531 5.9e-97 359.0 531 44.4
Sp6g26850 Schrenkiella parvula HOM05D005725 ORTHO05D007531 7.8e-97 358.6 524 43.5
BraA02t05379Z Brassica rapa HOM05D005725 ORTHO05D007531 1.0e-96 358.2 529 44.4
Thhalv10015915m.g Eutrema salsugineum HOM05D005725 ORTHO05D007531 1.7e-96 357.5 515 42.1
C02p09010 Brassica napus HOM05D005725 ORTHO05D007531 2.9e-96 356.7 530 44.2
AUR62017886 Chenopodium quinoa HOM05D005725 ORTHO05D007531 2.5e-95 353.6 510 41.2
arahy.Tifrunner.gnm1.ann1.GBFD5K Arachis hypogaea HOM05D005725 ORTHO05D007531 7.3e-95 352.1 441 46.5
SalBow8G4963 Salvia bowleyana HOM05D005725 ORTHO05D007531 2.8e-94 350.1 506 41.5
Migut.M02028 Erythranthe guttata HOM05D005725 ORTHO05D007531 2.2e-91 340.5 511 38.9
Nitab4.5_0001484g0010 Nicotiana tabacum HOM05D005725 ORTHO05D007531 3.2e-90 336.7 372 49.5
ATR0794G001 Amborella trichopoda HOM05D005725 ORTHO05D007531 4.1e-90 336.3 515 40.2
Aa31LG11G12260 Aethionema arabicum HOM05D005725 ORTHO05D007531 7.0e-90 335.5 498 42.0
Zm00001eb298410 Zea mays HOM05D005725 ORTHO05D007531 2.0e-89 334.0 513 39.0
CARHR195840 Cardamine hirsuta HOM05D005725 ORTHO05D007531 3.5e-89 333.2 514 41.4
HPP92_000831 Vanilla planifolia HOM05D005725 ORTHO05D007531 6.0e-89 332.4 525 38.3
Lsat_1_v5_gn_8_107401 Lactuca sativa HOM05D005725 ORTHO05D007531 7.8e-89 332.0 396 47.2
arahy.Tifrunner.gnm1.ann1.G9C5AI Arachis hypogaea HOM05D005725 ORTHO05D007531 3.9e-88 329.7 441 45.1
Nitab4.5_0000253g0020 Nicotiana tabacum HOM05D005725 ORTHO05D007531 5.0e-88 329.3 366 48.1
Ciclev10015389m.g Citrus clementina HOM05D005725 ORTHO05D007531 4.3e-87 326.2 403 47.4
Os07g0108000 Oryza sativa ssp. japonica HOM05D005725 ORTHO05D007531 4.3e-87 326.2 520 37.9
SHI12770 Sapria himalayana HOM05D005725 ORTHO05D000023 4.6e-73 279.6 332 49.1
Duzib052G0524 Durio zibethinus HOM05D005725 ORTHO05D007531 4.3e-71 273.1 312 48.4
CSS0030006 Camellia sinensis var. sinensis HOM05D005725 ORTHO05D007531 6.2e-70 269.2 477 37.1
Pp3c6_29180 Physcomitrium patens HOM05D005725 ORTHO05D007531 6.8e-69 265.8 548 32.5
DCAR_004356 Daucus carota HOM05D005725 ORTHO05D007531 2.0e-68 264.2 455 36.9
Haze_05198 Corylus avellana HOM05D005725 ORTHO05D007531 3.8e-67 260.0 273 53.1
RcHm_v2.0_Chr5g0021601 Rosa chinensis HOM05D005725 ORTHO05D007531 3.2e-58 230.3 281 43.4
Sc05g0005240 Simmondsia chinensis HOM05D005725 ORTHO05D007531 2.3e-56 224.2 314 40.8
Atru.chr2.2825 Acer truncatum HOM05D005725 ORTHO05D007531 3.9e-56 223.4 334 41.9
DCAR_004355 Daucus carota HOM05D005725 ORTHO05D007531 7.9e-49 199.1 452 31.6
unitig_746.g26584 Utricularia gibba HOM05D005809 ORTHO05D007259 3.3e-47 193.7 281 40.2
Mapoly0033s0026 Marchantia polymorpha HOM05D005725 ORTHO05D007531 2.1e-46 191.0 542 28.8
Potri.003G155900 Populus trichocarpa HOM05D005725 ORTHO05D007531 8.4e-43 179.1 143 62.2
CDE06G0984 Ceratophyllum demersum HOM05D005725 ORTHO05D007531 3.2e-42 177.2 277 39.0
Haze_05199 Corylus avellana HOM05D005725 ORTHO05D007531 4.2e-42 176.8 264 42.8
EL10Ac6g15292 Beta vulgaris HOM05D005725 ORTHO05D007531 2.1e-38 164.5 135 60.0
ECA232G1808 Erigeron canadensis HOM05D005725 ORTHO05D007531 1.4e-37 161.8 305 36.4
AagrBONN_evm.TU.Sc2ySwM_368.2823 Anthoceros agrestis HOM05D005725 ORTHO05D007531 1.1e-34 152.1 522 26.4
RcHm_v2.0_Chr5g0021611 Rosa chinensis HOM05D005725 ORTHO05D007531 1.4e-34 151.8 161 50.3
CBR_g22873 Chara braunii HOM05D005725 ORTHO05D007531 4.5e-28 130.2 617 24.5
Oeu013488.1 Olea europaea HOM05D005725 ORTHO05D007531 7.7e-28 129.4 173 41.0
TAR626G0843 Trochodendron aralioides HOM05D005725 ORTHO05D007531 1.3e-27 128.6 135 48.1
SEGI_40606 Sequoiadendron giganteum HOM05D005725 ORTHO05D007531 2.9e-27 127.5 136 46.3
Ciclev10017729m.g Citrus clementina HOM05D005725 ORTHO05D007531 5.0e-27 126.7 115 49.6
Oeu005615.1 Olea europaea HOM05D000039 ORTHO05D005263 7.9e-25 119.4 104 57.7
SMO230G0054 Selaginella moellendorffii HOM05D005725 ORTHO05D007531 1.8e-24 118.2 253 30.8
SGA_v2.0_scaffold423G51459 Striga asiatica HOM05D005725 ORTHO05D007531 2.0e-23 114.8 208 36.5
A03p08350 Brassica napus HOM05D005725 ORTHO05D007531 2.4e-21 107.8 249 36.1
BcaC05g29074 Brassica carinata HOM05D005725 ORTHO05D007531 1.7e-11 75.1 135 41.5
unitig_746.g26585 Utricularia gibba HOM05D005725 ORTHO05D007531 2.2e-11 74.7 139 36.0
BolC5t33962H Brassica oleracea HOM05D005725 ORTHO05D007531 1.1e-10 72.4 124 41.9
Atru.chr3.3228 Acer truncatum HOM05D000154 ORTHO05D000092 2.3e-08 64.7 65 44.6
C09p34670 Brassica napus HOM05D005725 ORTHO05D007531 4.0e-08 63.9 144 34.0
BolC9t56313H Brassica oleracea HOM05D005725 ORTHO05D007531 4.0e-08 63.9 144 34.0
Glyma.06G212700 Glycine max HOM05D005725 ORTHO05D007531 5.2e-08 63.5 74 43.2
SEGI_16346 Sequoiadendron giganteum HOM05D005725 ORTHO05D007531 8.8e-08 62.8 152 32.9
Dinv31193 Davidia involucrata HOM05D005725 ORTHO05D020553 2.0e-07 61.6 89 42.7
SHI12772 Sapria himalayana HOM05D005725 ORTHO05D007531 6.3e-06 56.6 70 37.1
Atru.chr1.2967 Acer truncatum HOM05D005725 ORTHO05D007531 8.2e-06 56.2 106 37.7


User provided reference genes

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