Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C04235 Eucalyptus grandis HOM05D006257 ORTHO05D007708 1.2e-116 423.3 230 100.0
PGR102G0698 Punica granatum HOM05D006257 ORTHO05D007708 8.3e-70 267.7 232 67.7
MD02G1029500 Malus domestica HOM05D006257 ORTHO05D007708 2.5e-66 256.1 233 63.9
Duzib187G1365 Durio zibethinus HOM05D006257 ORTHO05D007708 6.1e-65 251.5 237 62.4
MD15G1170900 Malus domestica HOM05D006257 ORTHO05D007708 1.2e-63 247.3 238 62.6
Prupe.7G245400 Prunus persica HOM05D006257 ORTHO05D007708 1.5e-63 246.9 237 63.3
Gohir.A07G036500 Gossypium hirsutum HOM05D006257 ORTHO05D007708 2.6e-63 246.1 238 63.0
Glyma.04G142800 Glycine max HOM05D006257 ORTHO05D007708 3.4e-63 245.7 233 61.8
Phvul.003G166300 Phaseolus vulgaris HOM05D006257 ORTHO05D007708 4.4e-63 245.4 232 60.3
Potri.018G129600 Populus trichocarpa HOM05D006257 ORTHO05D007708 4.4e-63 245.4 239 63.2
VMungo1215G0813 Vigna mungo HOM05D006257 ORTHO05D007708 4.4e-63 245.4 232 59.9
Cpa.g.sc46.16 Carica papaya HOM05D006257 ORTHO05D007708 5.7e-63 245.0 200 68.5
CiPaw.03G245900 Carya illinoinensis HOM05D006257 ORTHO05D007708 7.5e-63 244.6 235 62.6
Manes.06G057000 Manihot esculenta HOM05D006257 ORTHO05D007708 1.3e-62 243.8 234 60.3
Ca_06925_v3 Cicer arietinum L. HOM05D006257 ORTHO05D007708 1.7e-62 243.4 232 62.1
Medtr0339s0030 Medicago truncatula HOM05D006257 ORTHO05D007708 1.7e-62 243.4 230 61.3
Atru.chr7.1126 Acer truncatum HOM05D006257 ORTHO05D007708 2.2e-62 243.0 236 63.1
Lj4g0014254 Lotus japonicus HOM05D006257 ORTHO05D007708 3.7e-62 242.3 234 60.3
Lalb_Chr07g0179081 Lupinus albus HOM05D006257 ORTHO05D007708 3.7e-62 242.3 232 62.9
Thecc.09G128900 Theobroma cacao HOM05D006257 ORTHO05D007708 3.7e-62 242.3 238 61.3
TPR.G26482 Trifolium pratense HOM05D006257 ORTHO05D007708 3.7e-62 242.3 230 62.2
CiPaw.04G172800 Carya illinoinensis HOM05D006257 ORTHO05D007708 4.9e-62 241.9 233 60.5
arahy.Tifrunner.gnm1.ann1.BX3F9W Arachis hypogaea HOM05D006257 ORTHO05D007708 1.8e-61 240.0 231 63.6
Gorai.001G043000 Gossypium raimondii HOM05D006257 ORTHO05D007708 2.4e-61 239.6 238 61.8
Lalb_Chr13g0301741 Lupinus albus HOM05D006257 ORTHO05D007708 2.4e-61 239.6 233 60.9
Potri.006G067600 Populus trichocarpa HOM05D006257 ORTHO05D007708 4.1e-61 238.8 239 59.8
arahy.Tifrunner.gnm1.ann1.FTT948 Arachis hypogaea HOM05D006257 ORTHO05D007708 5.4e-61 238.4 231 63.2
Glyma.06G224200 Glycine max HOM05D006257 ORTHO05D007708 5.4e-61 238.4 235 60.4
Actinidia21972 Actinidia chinensis HOM05D006257 ORTHO05D007708 9.2e-61 237.7 233 61.8
Ciclev10009322m.g Citrus clementina HOM05D006257 ORTHO05D007708 3.5e-60 235.7 243 60.5
TAR636G3495 Trochodendron aralioides HOM05D006257 ORTHO05D007708 3.5e-60 235.7 232 60.8
GSVIVG01015564001 Vitis vinifera HOM05D006257 ORTHO05D007708 4.5e-60 235.3 237 59.5
Gohir.D07G040500 Gossypium hirsutum HOM05D006257 ORTHO05D007708 5.9e-60 235.0 240 60.4
CSS0030940 Camellia sinensis var. sinensis HOM05D006257 ORTHO05D007708 7.8e-60 234.6 239 60.7
Hma1.2p1_0931F.1_g238140 Hydrangea macrophylla HOM05D006257 ORTHO05D007708 1.0e-59 234.2 236 60.6
QL02p088998 Quercus lobata HOM05D006257 ORTHO05D007708 8.6e-59 231.1 233 59.2
Sabra06G0050300 Salix brachista HOM05D006257 ORTHO05D007708 1.5e-58 230.3 256 56.2
Duzib168G0222 Durio zibethinus HOM05D006257 ORTHO05D007708 1.9e-58 229.9 239 57.7
PSO210G1954 Papaver somniferum HOM05D006257 ORTHO05D007708 1.9e-58 229.9 230 60.9
PSO210G1348 Papaver somniferum HOM05D006257 ORTHO05D007708 4.3e-58 228.8 230 61.3
vmacro20574 Vaccinium macrocarpon HOM05D006257 ORTHO05D007708 4.3e-58 228.8 236 58.9
Actinidia40485 Actinidia chinensis HOM05D006257 ORTHO05D007708 5.6e-58 228.4 235 58.7
COL.COLO4_35097 Corchorus olitorius HOM05D006257 ORTHO05D007708 7.3e-58 228.0 237 57.8
Sed0025440 Sechium edule HOM05D006257 ORTHO05D007708 2.8e-57 226.1 233 59.2
AUR62011151 Chenopodium quinoa HOM05D006257 ORTHO05D007708 3.6e-57 225.7 237 59.9
ClCG11G003160 Citrullus lanatus HOM05D006257 ORTHO05D007708 1.0e-56 224.2 216 62.5
MELO3C004491.2 Cucumis melo HOM05D006257 ORTHO05D007708 1.0e-56 224.2 237 57.8
Haze_25555 Corylus avellana HOM05D006257 ORTHO05D007708 1.4e-56 223.8 231 58.4
Sabra18G0110100 Salix brachista HOM05D006257 ORTHO05D007708 1.8e-56 223.4 220 60.9
THA.LOC104808977 Tarenaya hassleriana HOM05D006257 ORTHO05D007708 1.8e-56 223.4 224 58.0
Aqoxy7G02265 Aquilegia oxysepala HOM05D006257 ORTHO05D007708 2.3e-56 223.0 237 57.8
Lalb_Chr08g0234691 Lupinus albus HOM05D006257 ORTHO05D007708 4.0e-56 222.2 235 57.9
Peaxi162Scf00313g00815 Petunia axillaris HOM05D006257 ORTHO05D007708 4.0e-56 222.2 219 60.3
MSTRG.26415 Avicennia marina HOM05D006257 ORTHO05D007708 5.2e-56 221.9 232 60.3
CsaV3_2G002980 Cucumis sativus L. HOM05D006257 ORTHO05D007708 6.8e-56 221.5 241 57.3
HanXRQChr10g0315681 Helianthus annuus HOM05D006257 ORTHO05D007708 6.8e-56 221.5 232 59.1
Cc06_g08290 Coffea canephora HOM05D006257 ORTHO05D007708 2.0e-55 219.9 236 59.3
Solyc12g009600.2 Solanum lycopersicum HOM05D006257 ORTHO05D007708 2.0e-55 219.9 206 61.7
MBI04_g29340_MAGBIO Magnolia biondii HOM05D006257 ORTHO05D007708 2.6e-55 219.5 232 57.8
Lj7A424T23 Lonicera japonica HOM05D006257 ORTHO05D007708 5.8e-55 218.4 214 60.3
CAN.G551.82 Capsicum annuum HOM05D006257 ORTHO05D007708 7.5e-55 218.0 207 61.8
Hund09262 Selenicereus undatus HOM05D006257 ORTHO05D007708 7.5e-55 218.0 226 56.2
Sopen12g004590 Solanum pennellii HOM05D006257 ORTHO05D007708 9.8e-55 217.6 232 58.2
Ah.09g225230 Amaranthus hybridus HOM05D006257 ORTHO05D007708 1.3e-54 217.2 175 70.3
EL10Ac8g18684 Beta vulgaris HOM05D006257 ORTHO05D007708 3.7e-54 215.7 205 62.0
Nitab4.5_0001349g0030 Nicotiana tabacum HOM05D006257 ORTHO05D007708 4.9e-54 215.3 234 58.5
RcHm_v2.0_Chr2g0088141 Rosa chinensis HOM05D006257 ORTHO05D007708 4.9e-54 215.3 233 57.9
CARHR250830 Cardamine hirsuta HOM05D006257 ORTHO05D007708 1.1e-53 214.2 172 66.9
Nitab4.5_0006319g0030 Nicotiana tabacum HOM05D006257 ORTHO05D007708 1.1e-53 214.2 234 59.4
A09p01980 Brassica napus HOM05D006257 ORTHO05D007708 3.2e-53 212.6 220 56.8
AUR62013336 Chenopodium quinoa HOM05D006257 ORTHO05D007708 3.2e-53 212.6 254 55.1
SGA_v2.0_scaffold63G21838 Striga asiatica HOM05D006257 ORTHO05D007708 5.4e-53 211.8 175 69.1
Thhalv10028953m.g Eutrema salsugineum HOM05D006257 ORTHO05D007708 9.2e-53 211.1 233 54.5
Sp6g02450 Schrenkiella parvula HOM05D006257 ORTHO05D007708 9.2e-53 211.1 219 55.7
C09p02090 Brassica napus HOM05D006257 ORTHO05D007708 1.6e-52 210.3 235 55.3
ECA234G3820 Erigeron canadensis HOM05D006257 ORTHO05D007708 2.0e-52 209.9 233 56.2
BcaC04g23996 Brassica carinata HOM05D006257 ORTHO05D007708 2.7e-52 209.5 234 53.8
Oeu052179.2 Olea europaea HOM05D006257 ORTHO05D007708 3.5e-52 209.1 232 58.6
TWI63G0502 Tripterygium wilfordii HOM05D006257 ORTHO05D007708 3.5e-52 209.1 241 55.2
BraA09t35849Z Brassica rapa HOM05D006257 ORTHO05D007708 4.6e-52 208.8 219 54.3
TWI34G0058 Tripterygium wilfordii HOM05D006257 ORTHO05D007708 4.6e-52 208.8 238 55.5
BolC9t53138H Brassica oleracea HOM05D006257 ORTHO05D007708 7.8e-52 208.0 234 53.4
AL6G50510 Arabidopsis lyrata HOM05D006257 ORTHO05D007708 1.3e-51 207.2 233 54.1
DCAR_020916 Daucus carota HOM05D006257 ORTHO05D007708 1.3e-51 207.2 235 55.3
Glyma.17G113300 Glycine max HOM05D006257 ORTHO05D007708 1.3e-51 207.2 195 62.1
AT4G02530 Arabidopsis thaliana HOM05D006257 ORTHO05D007708 5.0e-51 205.3 233 54.9
unitig_37.g12643 Utricularia gibba HOM05D006257 ORTHO05D007708 1.9e-50 203.4 230 55.2
FAN23G1258 Fragaria x ananassa HOM05D006257 ORTHO05D007708 2.5e-50 203.0 220 55.9
FAN28G1785 Fragaria x ananassa HOM05D006257 ORTHO05D007708 2.5e-50 203.0 220 55.9
FvH4_1g03010 Fragaria vesca HOM05D006257 ORTHO05D007708 4.3e-50 202.2 220 55.9
FAN26G0886 Fragaria x ananassa HOM05D006257 ORTHO05D007708 4.3e-50 202.2 220 55.9
Carub.0006s3460 Capsella rubella HOM05D006257 ORTHO05D007708 1.2e-49 200.7 233 54.5
Lsat_1_v5_gn_5_95081 Lactuca sativa HOM05D006257 ORTHO05D007708 1.2e-49 200.7 224 56.7
TAR625G1128 Trochodendron aralioides HOM05D006257 ORTHO05D007708 1.2e-49 200.7 152 71.7
FAN19G0162 Fragaria x ananassa HOM05D006257 ORTHO05D007708 2.1e-49 199.9 173 64.7
Aa31LG5G2160 Aethionema arabicum HOM05D006257 ORTHO05D007708 1.8e-48 196.8 231 54.1
Migut.K00442 Erythranthe guttata HOM05D006257 ORTHO05D007708 3.1e-48 196.1 252 52.0
CDE07G0641 Ceratophyllum demersum HOM05D006257 ORTHO05D007708 9.8e-47 191.0 220 55.5
CANSAT11G2152 Cannabis sativa HOM05D006257 ORTHO05D007708 1.3e-46 190.7 134 72.4
HPP92_024114 Vanilla planifolia HOM05D006257 ORTHO05D007708 1.3e-46 190.7 150 66.7
HPP92_024119 Vanilla planifolia HOM05D006257 ORTHO05D007708 2.2e-46 189.9 208 52.9
ATR0598G180 Amborella trichopoda HOM05D006257 ORTHO05D007708 3.7e-46 189.1 162 64.2
Nn8g39488 Nelumbo nucifera HOM05D006257 ORTHO05D007708 3.2e-45 186.0 204 60.8
Os06g0705100 Oryza sativa ssp. japonica HOM05D006257 ORTHO05D007708 4.1e-45 185.7 172 57.6
Oeu038255.2 Olea europaea HOM05D006257 ORTHO05D007708 1.6e-44 183.7 268 47.0
Sc14g0000190 Simmondsia chinensis HOM05D006257 ORTHO05D007708 8.6e-43 177.9 173 60.7
Zm00001eb227340 Zea mays HOM05D006257 ORTHO05D007708 2.8e-41 172.9 173 55.5
Dinv36505 Davidia involucrata HOM05D006257 ORTHO05D007708 6.2e-41 171.8 175 61.1
Aqoxy7G03671 Aquilegia oxysepala HOM05D006257 ORTHO05D007708 1.1e-34 151.0 199 52.3
BcaC03g16142 Brassica carinata HOM05D006257 ORTHO05D007708 7.3e-34 148.3 140 60.7
Sed0003979 Sechium edule HOM05D006257 ORTHO05D007708 6.2e-33 145.2 198 51.0
Manes.14G133800 Manihot esculenta HOM05D006257 ORTHO05D007708 1.4e-32 144.1 174 52.9
A02p24830 Brassica napus HOM05D006257 ORTHO05D007708 5.8e-31 138.7 128 59.4
BraA02t07471Z Brassica rapa HOM05D007780 ORTHO05D000140 1.4e-29 134.0 128 57.0
Mapoly0099s0035 Marchantia polymorpha HOM05D006257 ORTHO05D007708 6.0e-28 128.6 144 49.3
Psat4g037320 Pisum sativum HOM05D006257 ORTHO05D007708 7.8e-28 128.3 173 51.4
AagrBONN_evm.TU.Sc2ySwM_344.2604 Anthoceros agrestis HOM05D006257 ORTHO05D007708 1.0e-27 127.9 217 40.6
SMO111G0154 Selaginella moellendorffii HOM05D006257 ORTHO05D007708 1.0e-27 127.9 145 47.6
Pp3c8_15020 Physcomitrium patens HOM05D006257 ORTHO05D007708 2.4e-24 116.7 174 42.5
SEGI_32211 Sequoiadendron giganteum HOM05D006257 ORTHO05D007708 3.2e-21 106.3 111 50.5
C02p39320 Brassica napus HOM05D006257 ORTHO05D007708 3.0e-19 99.8 75 68.0
Pp3c24_6770 Physcomitrium patens HOM05D006257 ORTHO05D007708 2.6e-15 86.7 134 41.8
Mapoly0522s0001 Marchantia polymorpha HOM05D006257 ORTHO05D007708 3.4e-15 86.3 106 44.3
FAN19G1291 Fragaria x ananassa HOM05D006257 ORTHO05D007708 7.9e-12 75.1 111 46.8
BcaB05g23639 Brassica carinata HOM05D006257 ORTHO05D007708 1.3e-09 67.8 109 43.1


User provided reference genes

Program Settings