Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C04107 Eucalyptus grandis HOM05D007076 ORTHO05D008800 7.4e-144 513.8 257 100.0
Thecc.09G139600 Theobroma cacao HOM05D007076 ORTHO05D008800 2.5e-107 392.5 255 75.7
Duzib168G1701 Durio zibethinus HOM05D007076 ORTHO05D008800 2.7e-106 389.0 254 74.4
Gohir.A05G012200 Gossypium hirsutum HOM05D007076 ORTHO05D008800 2.7e-106 389.0 253 75.9
Gorai.009G013300 Gossypium raimondii HOM05D007076 ORTHO05D008800 6.1e-106 387.9 253 76.3
CiPaw.15G183500 Carya illinoinensis HOM05D007076 ORTHO05D008800 1.0e-105 387.1 254 73.2
Gohir.D05G013300 Gossypium hirsutum HOM05D007076 ORTHO05D008800 6.8e-105 384.4 253 75.9
MD15G1161100 Malus domestica HOM05D007076 ORTHO05D008800 9.8e-104 380.6 255 73.7
FAN26G2288 Fragaria x ananassa HOM05D007076 ORTHO05D008800 1.4e-102 376.7 255 73.3
FvH4_1g01870 Fragaria vesca HOM05D007076 ORTHO05D008800 3.1e-102 375.6 255 72.9
FAN19G3087 Fragaria x ananassa HOM05D007076 ORTHO05D008800 3.1e-102 375.6 255 72.9
QL02p091054 Quercus lobata HOM05D007076 ORTHO05D008800 5.4e-102 374.8 253 72.3
Prupe.7G256300 Prunus persica HOM05D007076 ORTHO05D008800 7.0e-102 374.4 255 72.5
RcHm_v2.0_Chr2g0086841 Rosa chinensis HOM05D007076 ORTHO05D008800 9.2e-102 374.0 254 72.8
FAN23G1541 Fragaria x ananassa HOM05D007076 ORTHO05D008800 1.2e-101 373.6 251 73.3
CANSAT11G0571 Cannabis sativa HOM05D007076 ORTHO05D008800 3.5e-101 372.1 250 73.2
Sed0007180 Sechium edule HOM05D007076 ORTHO05D008800 4.5e-101 371.7 250 73.2
GSVIVG01012872001 Vitis vinifera HOM05D007076 ORTHO05D008800 5.9e-101 371.3 205 85.4
Cfa020904 Carpinus fangiana HOM05D007076 ORTHO05D008800 6.6e-100 367.9 252 73.8
TWI34G1052 Tripterygium wilfordii HOM05D007076 ORTHO05D008800 8.6e-100 367.5 251 74.1
Manes.14G120300 Manihot esculenta HOM05D007076 ORTHO05D008800 1.5e-99 366.7 249 71.9
PGR142G4145 Punica granatum HOM05D007076 ORTHO05D008800 1.9e-99 366.3 247 76.5
ClCG06G011950 Citrullus lanatus HOM05D007076 ORTHO05D008800 4.7e-98 361.7 250 71.2
MELO3C010270.2 Cucumis melo HOM05D007076 ORTHO05D008800 6.1e-98 361.3 248 72.2
Lalb_Chr07g0179431 Lupinus albus HOM05D007076 ORTHO05D008800 1.4e-97 360.1 249 71.5
Potri.006G060100 Populus trichocarpa HOM05D007076 ORTHO05D008800 4.4e-96 355.1 249 69.9
CsaV3_1G028410 Cucumis sativus L. HOM05D007076 ORTHO05D008800 5.7e-96 354.8 248 70.6
TAR625G0498 Trochodendron aralioides HOM05D007076 ORTHO05D008800 7.5e-96 354.4 255 70.2
Actinidia21919 Actinidia chinensis HOM05D007076 ORTHO05D008800 2.2e-95 352.8 253 70.4
Ciclev10009248m.g Citrus clementina HOM05D007076 ORTHO05D008800 6.4e-95 351.3 247 70.9
Glyma.13G164900 Glycine max HOM05D007076 ORTHO05D008800 1.1e-94 350.5 249 69.5
Glyma.17G106200 Glycine max HOM05D007076 ORTHO05D008800 1.1e-94 350.5 247 70.9
Nitab4.5_0003305g0010 Nicotiana tabacum HOM05D007076 ORTHO05D008800 3.2e-94 349.0 255 68.6
Peaxi162Scf00088g00017 Petunia axillaris HOM05D007076 ORTHO05D008800 4.1e-94 348.6 261 69.0
vmacro21890 Vaccinium macrocarpon HOM05D007076 ORTHO05D008800 4.1e-94 348.6 257 68.1
Aa31LG1G29340 Aethionema arabicum HOM05D007076 ORTHO05D008800 1.6e-93 346.7 257 70.4
Nitab4.5_0008829g0010 Nicotiana tabacum HOM05D007076 ORTHO05D008800 1.6e-93 346.7 258 67.1
Oeu058595.1 Olea europaea HOM05D007076 ORTHO05D008800 3.5e-93 345.5 251 69.7
BcaC02g06997 Brassica carinata HOM05D007076 ORTHO05D008800 4.6e-93 345.1 231 72.7
Ca_21630_v3 Cicer arietinum L. HOM05D007076 ORTHO05D008800 7.8e-93 344.4 249 67.9
Ca_30692_v3 Cicer arietinum L. HOM05D007076 ORTHO05D008800 7.8e-93 344.4 249 67.9
Medtr4g116350 Medicago truncatula HOM05D007076 ORTHO05D008800 7.8e-93 344.4 234 70.1
BolC4t28783H Brassica oleracea HOM05D007076 ORTHO05D008800 1.0e-92 344.0 232 72.8
THA.LOC104817530 Tarenaya hassleriana HOM05D007076 ORTHO05D008800 1.0e-92 344.0 250 68.4
AL4G47500 Arabidopsis lyrata HOM05D007076 ORTHO05D008800 1.3e-92 343.6 232 73.7
COL.COLO4_24128 Corchorus olitorius HOM05D007076 ORTHO05D008800 1.3e-92 343.6 215 76.7
Cpa.g.sc46.76 Carica papaya HOM05D007076 ORTHO05D008800 3.0e-92 342.4 252 69.8
CARHR143300 Cardamine hirsuta HOM05D007076 ORTHO05D008800 5.0e-92 341.7 253 70.4
Lj4g0004831 Lotus japonicus HOM05D007076 ORTHO05D008800 5.0e-92 341.7 250 67.6
Rhsim01G0051700 Rhododendron simsii HOM05D007076 ORTHO05D008800 8.6e-92 340.9 253 66.8
BraA04t18948Z Brassica rapa HOM05D007076 ORTHO05D008800 1.1e-91 340.5 253 69.6
A04p35120 Brassica napus HOM05D007076 ORTHO05D008800 1.5e-91 340.1 253 69.6
FAN28G0280 Fragaria x ananassa HOM05D007076 ORTHO05D008800 1.5e-91 340.1 255 68.2
Solyc07g007280.4 Solanum lycopersicum HOM05D007076 ORTHO05D008800 1.5e-91 340.1 252 67.9
PSO170G2339 Papaver somniferum HOM05D007076 ORTHO05D008800 3.3e-91 339.0 255 67.1
Carub.0004s3063 Capsella rubella HOM05D007076 ORTHO05D008800 4.3e-91 338.6 235 72.3
Nn1g00072 Nelumbo nucifera HOM05D007076 ORTHO05D008800 5.6e-91 338.2 252 66.3
VMungo1215G2969 Vigna mungo HOM05D007076 ORTHO05D008800 5.6e-91 338.2 255 65.9
MSTRG.19622 Avicennia marina HOM05D007076 ORTHO05D008800 1.2e-90 337.0 245 68.6
BcaB06g29501 Brassica carinata HOM05D007076 ORTHO05D008800 1.6e-90 336.7 200 77.5
PGSC0003DMG400030692 Solanum tuberosum HOM05D007076 ORTHO05D008800 2.1e-90 336.3 253 67.2
TPR.G15804 Trifolium pratense HOM05D007076 ORTHO05D008800 2.1e-90 336.3 247 66.0
Sp4g29830 Schrenkiella parvula HOM05D007076 ORTHO05D008800 3.6e-90 335.5 212 75.5
Sopen07g003340 Solanum pennellii HOM05D007076 ORTHO05D008800 3.6e-90 335.5 252 67.5
Lsat_1_v5_gn_7_46141 Lactuca sativa HOM05D007076 ORTHO05D008800 4.7e-90 335.1 252 67.1
Sabra06G0043400 Salix brachista HOM05D000638 ORTHO05D000801 1.8e-89 333.2 225 71.6
Nn2g12218 Nelumbo nucifera HOM05D007076 ORTHO05D008800 3.1e-89 332.4 247 66.4
Psat7g049360 Pisum sativum HOM05D007076 ORTHO05D008800 6.8e-89 331.3 247 67.6
Dinv41435 Davidia involucrata HOM05D007076 ORTHO05D008800 1.5e-88 330.1 221 72.4
CAN.G728.2 Capsicum annuum HOM05D007076 ORTHO05D008800 2.6e-88 329.3 252 65.5
DCAR_017767 Daucus carota HOM05D007076 ORTHO05D008800 3.4e-88 328.9 234 69.2
Haze_19333 Corylus avellana HOM05D007076 ORTHO05D008800 5.8e-88 328.2 252 66.7
Thhalv10001598m.g Eutrema salsugineum HOM05D007076 ORTHO05D008800 7.5e-88 327.8 250 66.4
PSO017G3183 Papaver somniferum HOM05D007076 ORTHO05D008800 2.9e-87 325.9 255 64.3
CDE05G2705 Ceratophyllum demersum HOM05D007076 ORTHO05D008800 8.3e-87 324.3 254 63.0
Atru.chr7.279 Acer truncatum HOM05D007076 ORTHO05D008800 3.2e-86 322.4 185 79.5
Phvul.003G173400 Phaseolus vulgaris HOM05D007076 ORTHO05D008800 9.2e-86 320.9 183 77.6
Cc06_g07520 Coffea canephora HOM05D007076 ORTHO05D008800 1.0e-84 317.4 262 61.1
Migut.J01262 Erythranthe guttata HOM05D007076 ORTHO05D008800 1.0e-84 317.4 198 75.3
HanXRQChr09g0243091 Helianthus annuus HOM05D007076 ORTHO05D008800 1.0e-84 317.4 247 64.4
Aqoxy7G02462 Aquilegia oxysepala HOM05D007076 ORTHO05D008800 5.0e-84 315.1 232 66.8
SalBow1G5229 Salvia bowleyana HOM05D007076 ORTHO05D008800 3.3e-83 312.4 253 64.4
Ah.00g000030 Amaranthus hybridus HOM05D007076 ORTHO05D008800 3.6e-82 308.9 203 72.9
AT2G47910 Arabidopsis thaliana HOM05D007076 ORTHO05D008800 3.6e-82 308.9 180 81.1
MBI14_g03617_MAGBIO Magnolia biondii HOM05D007076 ORTHO05D008800 6.2e-82 308.1 274 63.5
Lj9A706G31 Lonicera japonica HOM05D007076 ORTHO05D008800 1.4e-81 307.0 182 76.9
C04p73020 Brassica napus HOM05D007076 ORTHO05D008800 3.1e-81 305.8 169 83.4
ATR0681G287 Amborella trichopoda HOM05D007076 ORTHO05D008800 5.2e-81 305.1 227 64.3
arahy.Tifrunner.gnm1.ann1.W7VCER Arachis hypogaea HOM05D007076 ORTHO05D008800 1.2e-80 303.9 247 64.0
Atru.BG.23.p Acer truncatum HOM05D007076 ORTHO05D008800 1.3e-79 300.4 175 80.6
AUR62041461 Chenopodium quinoa HOM05D007076 ORTHO05D008800 1.7e-79 300.1 262 61.1
Os08g0167500 Oryza sativa ssp. japonica HOM05D007076 ORTHO05D008800 1.7e-79 300.1 202 69.3
EL10Ac8g18804 Beta vulgaris HOM05D007076 ORTHO05D008800 1.9e-78 296.6 274 59.9
Zm00001eb172070 Zea mays HOM05D007076 ORTHO05D008800 6.0e-77 291.6 260 59.6
ECA240G2388 Erigeron canadensis HOM05D007076 ORTHO05D008800 7.8e-77 291.2 170 77.6
Duzib187G0567 Durio zibethinus HOM05D007076 ORTHO05D008800 1.6e-74 283.5 170 78.2
arahy.Tifrunner.gnm1.ann1.80N34X Arachis hypogaea HOM05D007076 ORTHO05D008800 1.3e-68 263.8 247 57.9
Nn3g21909 Nelumbo nucifera HOM05D007076 ORTHO05D008800 9.9e-64 247.7 191 63.4
unitig_37.g12628 Utricularia gibba HOM05D007076 ORTHO05D008800 3.8e-63 245.7 247 52.6
Nn1g04045 Nelumbo nucifera HOM05D007076 ORTHO05D008800 1.7e-60 236.9 139 77.7
AUR62011242 Chenopodium quinoa HOM05D007076 ORTHO05D008800 6.2e-58 228.4 261 51.0
Mapoly0095s0056 Marchantia polymorpha HOM05D007076 ORTHO05D008800 4.0e-57 225.7 197 53.8
SMO119G0333 Selaginella moellendorffii HOM05D007076 ORTHO05D008800 4.0e-57 225.7 172 58.1
Pp3c22_2510 Physcomitrium patens HOM05D007076 ORTHO05D008800 2.4e-54 216.5 269 46.8
AagrBONN_evm.TU.Sc2ySwM_362.135 Anthoceros agrestis HOM05D007076 ORTHO05D008800 6.0e-37 158.7 211 46.4
Migut.J01256 Erythranthe guttata HOM05D007076 ORTHO05D008800 3.9e-36 156.0 128 62.5
MD02G1016600 Malus domestica HOM05D007076 ORTHO05D008800 1.7e-31 140.6 255 37.3
CSS0010696 Camellia sinensis var. sinensis HOM05D007076 ORTHO05D008800 3.7e-26 122.9 64 84.4
Nn1g02289 Nelumbo nucifera HOM05D007076 ORTHO05D008800 3.4e-24 116.3 75 70.7
CSS0049676 Camellia sinensis var. sinensis HOM05D007076 ORTHO05D008800 7.7e-24 115.2 60 83.3
Oeu028011.1 Olea europaea HOM05D007076 ORTHO05D008800 8.5e-23 111.7 170 40.6
Nn1g02288 Nelumbo nucifera HOM05D007076 ORTHO05D008800 6.7e-20 102.1 84 58.3
CBR_g8382 Chara braunii HOM05D007076 ORTHO05D008800 3.7e-10 69.7 62 51.6


User provided reference genes

Program Settings