Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C04082 Eucalyptus grandis HOM05D007046 ORTHO05D008788 4.4e-55 217.6 103 100.0
PGR102G0910 Punica granatum HOM05D007046 ORTHO05D008788 3.6e-49 198.0 103 87.4
CiPaw.15G181500 Carya illinoinensis HOM05D007046 ORTHO05D008788 6.1e-49 197.2 103 85.4
Lj6g0012248 Lotus japonicus HOM05D007046 ORTHO05D008788 4.0e-48 194.5 103 86.4
VMungo1309G1390 Vigna mungo HOM05D007046 ORTHO05D008788 5.2e-48 194.1 103 86.4
Lalb_Chr11g0072851 Lupinus albus HOM05D007046 ORTHO05D008788 8.9e-48 193.4 103 87.4
Potri.006G189900 Populus trichocarpa HOM05D007046 ORTHO05D008788 1.5e-47 192.6 103 84.5
Aqoxy7G03530 Aquilegia oxysepala HOM05D007046 ORTHO05D008788 3.4e-47 191.4 103 82.5
Cfa020888 Carpinus fangiana HOM05D007046 ORTHO05D008788 4.4e-47 191.0 103 83.5
TWI63G1442 Tripterygium wilfordii HOM05D007046 ORTHO05D008788 4.4e-47 191.0 103 83.5
Glyma.15G202300 Glycine max HOM05D007046 ORTHO05D008788 5.8e-47 190.7 103 84.5
TPR.G33523 Trifolium pratense HOM05D007046 ORTHO05D008788 7.5e-47 190.3 102 84.3
CSS0047212 Camellia sinensis var. sinensis HOM05D007046 ORTHO05D008788 9.8e-47 189.9 103 82.5
Haze_19316 Corylus avellana HOM05D007046 ORTHO05D008788 1.3e-46 189.5 103 82.5
Manes.14G138900 Manihot esculenta HOM05D007046 ORTHO05D008788 1.3e-46 189.5 103 82.5
Gohir.A06G049800 Gossypium hirsutum HOM05D007046 ORTHO05D008788 1.7e-46 189.1 103 81.6
Gorai.010G056000 Gossypium raimondii HOM05D007046 ORTHO05D008788 1.7e-46 189.1 103 81.6
QL02p091361 Quercus lobata HOM05D007046 ORTHO05D008788 1.7e-46 189.1 102 82.4
THA.LOC104815395 Tarenaya hassleriana HOM05D007046 ORTHO05D008788 2.2e-46 188.7 103 81.6
CARHR217170 Cardamine hirsuta HOM05D007046 ORTHO05D008788 2.9e-46 188.3 103 79.6
Medtr2g461260 Medicago truncatula HOM05D007046 ORTHO05D008788 2.9e-46 188.3 102 83.3
CAN.G518.18 Capsicum annuum HOM05D007046 ORTHO05D008788 3.7e-46 188.0 103 81.6
arahy.Tifrunner.gnm1.ann1.I71V0M Arachis hypogaea HOM05D007046 ORTHO05D008788 4.9e-46 187.6 103 83.5
arahy.Tifrunner.gnm1.ann1.LM8BDD Arachis hypogaea HOM05D007046 ORTHO05D008788 4.9e-46 187.6 103 83.5
BcaC07g37677 Brassica carinata HOM05D007046 ORTHO05D008788 4.9e-46 187.6 103 79.6
A08p09580 Brassica napus HOM05D007046 ORTHO05D008788 4.9e-46 187.6 103 79.6
BolC8t48049H Brassica oleracea HOM05D007046 ORTHO05D008788 4.9e-46 187.6 103 79.6
BraA08t32955Z Brassica rapa HOM05D007046 ORTHO05D008788 4.9e-46 187.6 103 79.6
MD15G1159700 Malus domestica HOM05D007046 ORTHO05D008788 4.9e-46 187.6 103 80.6
PSO210G0748 Papaver somniferum HOM05D007046 ORTHO05D008788 4.9e-46 187.6 103 80.6
Rhsim03G0254300 Rhododendron simsii HOM05D007046 ORTHO05D008788 4.9e-46 187.6 103 80.6
GSVIVG01012898001 Vitis vinifera HOM05D007046 ORTHO05D008788 8.3e-46 186.8 103 81.6
BcaB04g18062 Brassica carinata HOM05D007046 ORTHO05D008788 1.4e-45 186.0 103 78.6
Duzib168G1879 Durio zibethinus HOM05D007046 ORTHO05D008788 1.4e-45 186.0 103 80.6
Gohir.D06G049100 Gossypium hirsutum HOM05D007046 ORTHO05D008788 1.4e-45 186.0 103 80.6
TAR625G0755 Trochodendron aralioides HOM05D007046 ORTHO05D008788 1.4e-45 186.0 103 82.5
CANSAT11G2023 Cannabis sativa HOM05D007046 ORTHO05D008788 1.9e-45 185.7 104 78.8
ClCG02G017260 Citrullus lanatus HOM05D007046 ORTHO05D008788 2.4e-45 185.3 103 79.6
CsaV3_2G003530 Cucumis sativus L. HOM05D007046 ORTHO05D008788 2.4e-45 185.3 103 79.6
Dinv42912 Davidia involucrata HOM05D007046 ORTHO05D008788 2.4e-45 185.3 103 80.6
Dinv43188 Davidia involucrata HOM05D007046 ORTHO05D008788 2.4e-45 185.3 103 80.6
Solyc07g007110.4 Solanum lycopersicum HOM05D007046 ORTHO05D008788 2.4e-45 185.3 103 80.6
Sopen07g003150 Solanum pennellii HOM05D007046 ORTHO05D008788 2.4e-45 185.3 103 80.6
PGSC0003DMG400030738 Solanum tuberosum HOM05D007046 ORTHO05D008788 2.4e-45 185.3 103 80.6
Thhalv10004727m.g Eutrema salsugineum HOM05D007046 ORTHO05D008788 4.1e-45 184.5 103 77.7
Ca_03117_v3 Cicer arietinum L. HOM05D007046 ORTHO05D008788 5.4e-45 184.1 101 81.2
PSO447G0221 Papaver somniferum HOM05D007046 ORTHO05D008788 5.4e-45 184.1 103 79.6
AL7G43950 Arabidopsis lyrata HOM05D007046 ORTHO05D008788 7.0e-45 183.7 103 77.7
Sed0001104 Sechium edule HOM05D007046 ORTHO05D008788 7.0e-45 183.7 103 78.6
Hund09318 Selenicereus undatus HOM05D007046 ORTHO05D008788 7.0e-45 183.7 103 77.7
MELO3C004443.2 Cucumis melo HOM05D007046 ORTHO05D008788 9.2e-45 183.3 103 78.6
Thecc.09G142000 Theobroma cacao HOM05D007046 ORTHO05D008788 1.2e-44 183.0 100 81.0
Psat0s4009g0040 Pisum sativum HOM05D007046 ORTHO05D008788 1.6e-44 182.6 102 80.4
Aa31LG2G12340 Aethionema arabicum HOM05D007046 ORTHO05D008788 2.0e-44 182.2 103 77.7
DCAR_008866 Daucus carota HOM05D007046 ORTHO05D008788 2.0e-44 182.2 103 79.6
Lj9A708G24 Lonicera japonica HOM05D007046 ORTHO05D008788 2.0e-44 182.2 103 79.6
Nn8g39721 Nelumbo nucifera HOM05D007046 ORTHO05D008788 2.0e-44 182.2 103 79.6
COL.COLO4_24098 Corchorus olitorius HOM05D007046 ORTHO05D008788 2.7e-44 181.8 103 77.7
Carub.0007s3089 Capsella rubella HOM05D007046 ORTHO05D008788 3.5e-44 181.4 103 77.7
Oeu052181.1 Olea europaea HOM05D007046 ORTHO05D008788 4.6e-44 181.0 103 77.7
MBI15_g31411_MAGBIO Magnolia biondii HOM05D007046 ORTHO05D008788 6.0e-44 180.6 103 75.7
Peaxi162Scf00347g00020 Petunia axillaris HOM05D007046 ORTHO05D008788 7.8e-44 180.3 103 78.6
AT5G35100 Arabidopsis thaliana HOM05D007046 ORTHO05D008788 1.0e-43 179.9 103 76.7
Ah.14g078770 Amaranthus hybridus HOM05D007046 ORTHO05D008788 1.3e-43 179.5 103 76.7
Hma1.2p1_0949F.1_g240590 Hydrangea macrophylla HOM05D007046 ORTHO05D008788 2.3e-43 178.7 103 76.7
Hma1.2p1_1784F.1_g302170 Hydrangea macrophylla HOM05D007046 ORTHO05D008788 3.0e-43 178.3 103 75.7
Sp7g07260 Schrenkiella parvula HOM05D007046 ORTHO05D008788 3.0e-43 178.3 103 76.7
Atru.chr7.254 Acer truncatum HOM05D007046 ORTHO05D008788 5.0e-43 177.6 125 67.2
Migut.J01275 Erythranthe guttata HOM05D007046 ORTHO05D008788 5.0e-43 177.6 103 75.7
RcHm_v2.0_Chr2g0086651 Rosa chinensis HOM05D007046 ORTHO05D008788 1.1e-42 176.4 104 76.9
AUR62011254 Chenopodium quinoa HOM05D007046 ORTHO05D008788 1.5e-42 176.0 103 73.8
AUR62041451 Chenopodium quinoa HOM05D007046 ORTHO05D008788 1.5e-42 176.0 103 73.8
Nitab4.5_0005384g0010 Nicotiana tabacum HOM05D007046 ORTHO05D008788 1.5e-42 176.0 103 76.7
MSTRG.19625 Avicennia marina HOM05D007046 ORTHO05D008788 1.9e-42 175.6 101 76.2
FvH4_1g01710 Fragaria vesca HOM05D007046 ORTHO05D008788 4.3e-42 174.5 104 75.0
FAN19G0320 Fragaria x ananassa HOM05D007046 ORTHO05D008788 4.3e-42 174.5 104 75.0
FAN26G3242 Fragaria x ananassa HOM05D007046 ORTHO05D008788 4.3e-42 174.5 104 75.0
FAN28G0193 Fragaria x ananassa HOM05D007046 ORTHO05D008788 4.3e-42 174.5 104 75.0
SalBow1G5965 Salvia bowleyana HOM05D007046 ORTHO05D008788 4.3e-42 174.5 103 74.8
Sc08g0005790 Simmondsia chinensis HOM05D007046 ORTHO05D008788 7.3e-42 173.7 103 70.9
Cc06_g07400 Coffea canephora HOM05D007046 ORTHO05D008788 9.5e-42 173.3 103 74.8
EL10Ac8g18815 Beta vulgaris HOM05D007046 ORTHO05D008788 1.2e-41 172.9 103 73.8
ECA240G3524 Erigeron canadensis HOM05D007046 ORTHO05D008788 1.2e-41 172.9 103 71.8
Ciclev10009009m.g Citrus clementina HOM05D007046 ORTHO05D008788 2.1e-41 172.2 108 72.2
FAN23G1503 Fragaria x ananassa HOM05D007046 ORTHO05D008788 2.1e-41 172.2 104 74.0
Lsat_1_v5_gn_7_47900 Lactuca sativa HOM05D007046 ORTHO05D008788 2.1e-41 172.2 103 71.8
ATR0629G031 Amborella trichopoda HOM05D007046 ORTHO05D008788 1.8e-40 169.1 100 74.0
CDE02G2211 Ceratophyllum demersum HOM05D007046 ORTHO05D008788 2.3e-40 168.7 103 70.9
HanXRQChr03g0064041 Helianthus annuus HOM05D007046 ORTHO05D008788 4.0e-40 167.9 103 68.9
Os08g0292600 Oryza sativa ssp. japonica HOM05D007046 ORTHO05D008788 6.8e-40 167.2 104 71.2
vmacro06109 Vaccinium macrocarpon HOM05D007046 ORTHO05D008788 3.4e-39 164.9 127 63.0
Prupe.7G254600 Prunus persica HOM05D007046 ORTHO05D008788 7.5e-39 163.7 89 80.9
SGA_v2.0_scaffold229G43345 Striga asiatica HOM05D007046 ORTHO05D008788 9.8e-39 163.3 123 63.4
Zm00001eb000740 Zea mays HOM05D007046 ORTHO05D008788 2.9e-38 161.8 104 69.2
AagrBONN_evm.TU.Sc2ySwM_117.689 Anthoceros agrestis HOM05D007046 ORTHO05D008788 2.4e-37 158.7 103 68.9
Mapoly0218s0001 Marchantia polymorpha HOM05D007046 ORTHO05D008788 2.7e-36 155.2 103 67.0
Pp3c14_1150 Physcomitrium patens HOM05D007046 ORTHO05D008788 3.3e-34 148.3 103 61.2
Sabra06G0145900 Salix brachista HOM05D007046 ORTHO05D008788 6.0e-28 127.5 73 79.5
CBR_g31424 Chara braunii HOM05D007046 ORTHO05D008788 3.3e-26 121.7 88 61.4
SMO197G0077 Selaginella moellendorffii HOM05D007046 ORTHO05D008788 4.3e-26 121.3 90 52.2
PRCOL_00003052 Prasinoderma coloniale HOM05D007046 ORTHO05D008788 2.1e-20 102.4 85 50.6
MCO05G162 Micromonas commoda HOM05D007046 ORTHO05D008788 2.7e-20 102.1 88 51.1
Cre12.g561000 Chlamydomonas reinhardtii HOM05D007046 ORTHO05D008788 9.6e-18 93.6 85 52.9
Phvul.009G211800 Phaseolus vulgaris HOM05D007046 ORTHO05D008788 3.5e-12 75.1 34 94.1
Glyma.09G095400 Glycine max HOM05D007046 ORTHO05D008788 2.3e-11 72.4 34 91.2
Nitab4.5_0001021g0040 Nicotiana tabacum HOM05D007046 ORTHO05D008788 1.5e-10 69.7 35 85.7
COL.COLO4_19843 Corchorus olitorius HOM05D007046 ORTHO05D008788 2.5e-10 68.9 41 70.7
SEGI_22609 Sequoiadendron giganteum HOM05D007046 ORTHO05D008788 5.6e-10 67.8 34 79.4
Nn3g19287 Nelumbo nucifera HOM05D007046 ORTHO05D008788 2.8e-09 65.5 35 80.0
Nn6g34105 Nelumbo nucifera HOM05D007046 ORTHO05D008788 2.8e-09 65.5 35 80.0
Os01g0111100 Oryza sativa ssp. japonica HOM05D006989 ORTHO05D008787 5.3e-08 61.2 84 38.1
Zm00001eb334490 Zea mays HOM05D006989 ORTHO05D008787 1.2e-07 60.1 81 34.6
Pp3c16_25910 Physcomitrium patens HOM05D006989 ORTHO05D008787 1.5e-07 59.7 90 34.4
MCO04G083 Micromonas commoda HOM05D006989 ORTHO05D008787 3.4e-07 58.5 75 40.0
Prupe.5G215800 Prunus persica HOM05D006989 ORTHO05D008787 1.7e-06 56.2 84 36.9
TAR371G0245 Trochodendron aralioides HOM05D006989 ORTHO05D008787 2.2e-06 55.8 89 34.8
AagrBONN_evm.TU.Sc2ySwM_228.3224 Anthoceros agrestis HOM05D006989 ORTHO05D008787 2.9e-06 55.5 89 31.5
Aqoxy3G00372 Aquilegia oxysepala HOM05D006989 ORTHO05D008787 3.8e-06 55.1 83 36.1
Hma1.2p1_0340F.1_g130010 Hydrangea macrophylla HOM05D006989 ORTHO05D008787 3.8e-06 55.1 81 35.8
Hma1.2p1_0340F.1_g130020 Hydrangea macrophylla HOM05D006989 ORTHO05D008787 3.8e-06 55.1 81 35.8
PRCOL_00006954 Prasinoderma coloniale HOM05D006989 ORTHO05D008787 3.8e-06 55.1 89 37.1
AUR62036938 Chenopodium quinoa HOM05D006989 ORTHO05D008787 4.9e-06 54.7 86 34.9
Sed0007811 Sechium edule HOM05D006989 ORTHO05D008787 4.9e-06 54.7 86 36.0
AUR62032178 Chenopodium quinoa HOM05D006989 ORTHO05D008787 6.4e-06 54.3 86 33.7
Cc04_g07650 Coffea canephora HOM05D006989 ORTHO05D008787 6.4e-06 54.3 73 37.0
HanXRQChr16g0502051 Helianthus annuus HOM05D006989 ORTHO05D008787 6.4e-06 54.3 86 32.6
Lsat_1_v5_gn_4_112081 Lactuca sativa HOM05D006989 ORTHO05D008787 6.4e-06 54.3 86 32.6
GSVIVG01008222001 Vitis vinifera HOM05D006989 ORTHO05D008787 6.4e-06 54.3 84 34.5
EL10Ac5g11238 Beta vulgaris HOM05D006989 ORTHO05D008787 8.4e-06 53.9 86 33.7
ClCG04G011330 Citrullus lanatus HOM05D006989 ORTHO05D008787 8.4e-06 53.9 70 37.1
Lj4g0002441 Lotus japonicus HOM05D006989 ORTHO05D008787 8.4e-06 53.9 89 33.7


User provided reference genes

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