Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C04063 Eucalyptus grandis HOM05D001921 ORTHO05D001784 8.1e-67 256.9 127 100.0
PGR102G2943 Punica granatum HOM05D001921 ORTHO05D001784 3.0e-21 105.5 127 51.2
FvH4_1g01550 Fragaria vesca HOM05D001921 ORTHO05D001784 1.5e-20 103.2 133 48.1
FAN19G1379 Fragaria x ananassa HOM05D001921 ORTHO05D001784 1.5e-20 103.2 133 48.1
FAN26G0252 Fragaria x ananassa HOM05D001921 ORTHO05D001784 1.9e-20 102.8 132 49.2
QL02p091546 Quercus lobata HOM05D001921 ORTHO05D001784 2.5e-20 102.4 129 52.7
FAN28G2602 Fragaria x ananassa HOM05D001921 ORTHO05D001784 4.3e-20 101.7 133 48.1
MD02G1012300 Malus domestica HOM05D001921 ORTHO05D001784 1.3e-19 100.1 127 48.0
FAN23G0500 Fragaria x ananassa HOM05D001921 ORTHO05D001784 6.3e-19 97.8 129 48.1
CSS0005509 Camellia sinensis var. sinensis HOM05D001921 ORTHO05D001784 1.4e-18 96.7 131 48.9
MD15G1158100 Malus domestica HOM05D001921 ORTHO05D001784 2.4e-18 95.9 128 48.4
ClCG11G003650 Citrullus lanatus HOM05D001921 ORTHO05D001784 3.1e-18 95.5 130 48.5
RcHm_v2.0_Chr2g0086511 Rosa chinensis HOM05D001921 ORTHO05D001784 5.3e-18 94.7 128 50.0
Prupe.7G253300 Prunus persica HOM05D001921 ORTHO05D001784 1.2e-17 93.6 126 48.4
MELO3C004451.2 Cucumis melo HOM05D001921 ORTHO05D001784 1.5e-17 93.2 128 47.7
Ca_21607_v3 Cicer arietinum L. HOM05D001921 ORTHO05D001784 5.9e-17 91.3 128 47.7
CsaV3_2G003470 Cucumis sativus L. HOM05D001921 ORTHO05D001784 1.0e-16 90.5 128 47.7
Psat4g034000 Pisum sativum HOM05D001921 ORTHO05D001784 1.0e-16 90.5 130 47.7
Medtr4g116830 Medicago truncatula HOM05D001921 ORTHO05D001784 2.2e-16 89.4 130 50.0
TPR.G15777 Trifolium pratense HOM05D001921 ORTHO05D001784 2.9e-16 89.0 131 49.6
Haze_19306 Corylus avellana HOM05D001921 ORTHO05D001784 1.1e-15 87.0 127 48.0
CiPaw.15G179300 Carya illinoinensis HOM05D001921 ORTHO05D001784 1.9e-15 86.3 127 47.2
Hma1.2p1_2976F.1_g331170 Hydrangea macrophylla HOM05D001921 ORTHO05D001784 2.5e-15 85.9 129 45.0
Cfa020875 Carpinus fangiana HOM05D001921 ORTHO05D001784 4.2e-15 85.1 127 47.2
Hma1.2p1_0028F.1_g017215 Hydrangea macrophylla HOM05D001921 ORTHO05D001784 5.5e-15 84.7 129 45.0
Phvul.003G175500 Phaseolus vulgaris HOM05D001921 ORTHO05D001784 2.7e-14 82.4 128 49.2
Cpa.g.sc46.103 Carica papaya HOM05D001921 ORTHO05D001784 3.6e-14 82.0 132 47.7
Ciclev10009542m.g Citrus clementina HOM05D001921 ORTHO05D001784 4.6e-14 81.6 137 42.3
Dinv42904 Davidia involucrata HOM05D001921 ORTHO05D001784 1.0e-13 80.5 100 50.0
Dinv43197 Davidia involucrata HOM05D001921 ORTHO05D001784 1.0e-13 80.5 100 50.0
Glyma.17G104300 Glycine max HOM05D001921 ORTHO05D001784 1.0e-13 80.5 129 47.3
Sed0017709 Sechium edule HOM05D001921 ORTHO05D001784 1.4e-13 80.1 136 42.6
Manes.06G040800 Manihot esculenta HOM05D001921 ORTHO05D001784 1.8e-13 79.7 129 46.5
Lj4g0015946 Lotus japonicus HOM05D001921 ORTHO05D001784 2.3e-13 79.3 130 47.7
Lalb_Chr11g0072831 Lupinus albus HOM05D001921 ORTHO05D001784 5.1e-13 78.2 132 47.0
Gohir.A06G095900 Gossypium hirsutum HOM05D001921 ORTHO05D001784 8.8e-13 77.4 114 46.5
Gohir.D06G096000 Gossypium hirsutum HOM05D001921 ORTHO05D001784 8.8e-13 77.4 114 46.5
Gorai.010G110700 Gossypium raimondii HOM05D001921 ORTHO05D001784 8.8e-13 77.4 114 46.5
Rhsim03G0253600 Rhododendron simsii HOM05D001921 ORTHO05D001784 1.5e-12 76.6 82 52.4
Duzib187G0406 Durio zibethinus HOM05D001921 ORTHO05D001784 1.9e-12 76.3 112 46.4
Glyma.13G156700 Glycine max HOM05D001921 ORTHO05D001784 2.5e-12 75.9 128 46.9
Lj6g0019201 Lotus japonicus HOM05D001921 ORTHO05D001784 2.5e-12 75.9 126 43.7
TWI34G0586 Tripterygium wilfordii HOM05D001921 ORTHO05D001784 2.5e-12 75.9 132 41.7
VMungo1215G2840 Vigna mungo HOM05D001921 ORTHO05D001784 2.5e-12 75.9 128 46.9
Ca_03892_v3 Cicer arietinum L. HOM05D001921 ORTHO05D001784 3.3e-12 75.5 126 45.2
Nitab4.5_0002992g0090 Nicotiana tabacum HOM05D001921 ORTHO05D001784 3.3e-12 75.5 132 42.4
Sc14g0000060 Simmondsia chinensis HOM05D001921 ORTHO05D001784 3.3e-12 75.5 123 40.7
COL.COLO4_18732 Corchorus olitorius HOM05D001921 ORTHO05D001784 7.4e-12 74.3 112 44.6
CiPaw.16G117000 Carya illinoinensis HOM05D001921 ORTHO05D001784 9.7e-12 73.9 127 44.1
TWI63G1839 Tripterygium wilfordii HOM05D001921 ORTHO05D001784 1.3e-11 73.6 130 43.1
Dinv41418 Davidia involucrata HOM05D001921 ORTHO05D001784 2.2e-11 72.8 132 40.9
CANSAT11G0699 Cannabis sativa HOM05D001921 ORTHO05D001784 2.8e-11 72.4 125 40.0
Thhalv10029029m.g Eutrema salsugineum HOM05D001921 ORTHO05D001784 3.7e-11 72.0 114 43.9
Gohir.A06G095800 Gossypium hirsutum HOM05D001921 ORTHO05D001784 4.8e-11 71.6 111 43.2
Gohir.D06G095900 Gossypium hirsutum HOM05D001921 ORTHO05D001784 4.8e-11 71.6 111 44.1
Gorai.010G110500 Gossypium raimondii HOM05D001921 ORTHO05D001784 4.8e-11 71.6 111 44.1
Manes.16G126400 Manihot esculenta HOM05D001921 ORTHO05D001784 6.3e-11 71.2 135 42.2
Nitab4.5_0009186g0010 Nicotiana tabacum HOM05D001921 ORTHO05D001784 1.1e-10 70.5 133 42.1
Potri.006G260000 Populus trichocarpa HOM05D001921 ORTHO05D001784 2.4e-10 69.3 130 45.4
TAR383G0606 Trochodendron aralioides HOM05D001921 ORTHO05D001784 2.4e-10 69.3 134 38.8
Atru.chr7.2506 Acer truncatum HOM05D001921 ORTHO05D001784 3.1e-10 68.9 148 41.9
AUR62011266 Chenopodium quinoa HOM05D001921 ORTHO05D001784 3.1e-10 68.9 121 43.0
DCAR_014829 Daucus carota HOM05D001921 ORTHO05D001784 5.3e-10 68.2 126 42.1
Thecc.09G037400 Theobroma cacao HOM05D001921 ORTHO05D001784 5.3e-10 68.2 114 41.2
Psat1g022640 Pisum sativum HOM05D001921 ORTHO05D001784 6.9e-10 67.8 109 44.0
Carub.0006s3519 Capsella rubella HOM05D001921 ORTHO05D001784 9.1e-10 67.4 112 40.2
Dinv03521 Davidia involucrata HOM05D001921 ORTHO05D001784 9.1e-10 67.4 131 39.7
Actinidia38704 Actinidia chinensis HOM05D001921 ORTHO05D001784 1.2e-09 67.0 129 38.8
CARHR249650 Cardamine hirsuta HOM05D001921 ORTHO05D001784 1.2e-09 67.0 110 41.8
AUR62041439 Chenopodium quinoa HOM05D001921 ORTHO05D001784 1.2e-09 67.0 121 42.1
AUR62042019 Chenopodium quinoa HOM05D001921 ORTHO05D001784 1.2e-09 67.0 121 42.1
AUR62043765 Chenopodium quinoa HOM05D001921 ORTHO05D001784 1.2e-09 67.0 121 42.1
Sp6g01920 Schrenkiella parvula HOM05D001921 ORTHO05D001784 2.0e-09 66.2 115 44.3
Nn2g12262 Nelumbo nucifera HOM05D001921 ORTHO05D001784 2.6e-09 65.9 136 39.0
Duzib187G0974 Durio zibethinus HOM05D001921 ORTHO05D001784 5.9e-09 64.7 140 35.7
Actinidia23087 Actinidia chinensis HOM05D001921 ORTHO05D001784 7.7e-09 64.3 109 39.4
TWI32G1277 Tripterygium wilfordii HOM05D001921 ORTHO05D001784 7.7e-09 64.3 133 37.6
CAN.G142.1 Capsicum annuum HOM05D001921 ORTHO05D001784 1.0e-08 63.9 132 40.2
Dinv03420 Davidia involucrata HOM05D001921 ORTHO05D001784 1.3e-08 63.5 112 42.0
Actinidia14231 Actinidia chinensis HOM05D001921 ORTHO05D001784 1.7e-08 63.2 91 47.3
PGSC0003DMG400029898 Solanum tuberosum HOM05D001921 ORTHO05D001784 1.7e-08 63.2 130 36.9
Oeu012641.1 Olea europaea HOM05D001921 ORTHO05D001784 2.2e-08 62.8 135 38.5
Gohir.A07G030700 Gossypium hirsutum HOM05D001921 ORTHO05D001784 2.9e-08 62.4 140 37.1
Prupe.1G486800 Prunus persica HOM05D001921 ORTHO05D001784 2.9e-08 62.4 139 35.3
Lsat_1_v5_gn_6_115320 Lactuca sativa HOM05D001921 ORTHO05D001784 3.8e-08 62.0 161 36.6
Potri.008G198000 Populus trichocarpa HOM05D001921 ORTHO05D001784 3.8e-08 62.0 137 35.0
CAN.G1045.40 Capsicum annuum HOM05D001921 ORTHO05D001784 5.0e-08 61.6 130 36.2
Thecc.09G018900 Theobroma cacao HOM05D001921 ORTHO05D001784 6.5e-08 61.2 139 36.7
AL6G51210 Arabidopsis lyrata HOM05D001921 ORTHO05D001784 8.5e-08 60.8 112 34.8
Gohir.D07G034600 Gossypium hirsutum HOM05D001921 ORTHO05D001784 8.5e-08 60.8 140 36.4
Gorai.001G036300 Gossypium raimondii HOM05D001921 ORTHO05D001784 8.5e-08 60.8 140 36.4
RcHm_v2.0_Chr6g0297171 Rosa chinensis HOM05D014836 ORTHO05D001784 8.5e-08 60.8 137 36.5
Duzib168G1630 Durio zibethinus HOM05D001921 ORTHO05D001784 1.1e-07 60.5 141 34.0
Aqoxy7G03512 Aquilegia oxysepala HOM05D001921 ORTHO05D001784 1.9e-07 59.7 129 32.6
CiPaw.08G008000 Carya illinoinensis HOM05D001921 ORTHO05D001784 2.5e-07 59.3 137 34.3
Gohir.D06G102300 Gossypium hirsutum HOM05D001921 ORTHO05D001784 2.5e-07 59.3 140 37.1
Lalb_Chr07g0179601 Lupinus albus HOM05D001921 ORTHO05D001784 3.2e-07 58.9 55 54.5
Sabra06G0203000 Salix brachista HOM05D001921 ORTHO05D001784 3.2e-07 58.9 133 41.4
MD15G1131400 Malus domestica HOM05D001921 ORTHO05D001784 4.2e-07 58.5 136 32.4
Gorai.010G117300 Gossypium raimondii HOM05D001921 ORTHO05D001784 5.5e-07 58.2 140 35.7
Medtr2g461300 Medicago truncatula HOM05D001921 ORTHO05D001784 5.5e-07 58.2 107 42.1
Sabra08G0162400 Salix brachista HOM05D001921 ORTHO05D001784 5.5e-07 58.2 133 35.3
Cfa013096 Carpinus fangiana HOM05D001921 ORTHO05D001784 7.2e-07 57.8 127 33.9
SabraUnG0005100 Salix brachista HOM05D001921 ORTHO05D001784 7.2e-07 57.8 133 40.6
Solyc08g041860.1 Solanum lycopersicum HOM05D001921 ORTHO05D001784 7.2e-07 57.8 74 47.3
Sopen08g012070 Solanum pennellii HOM05D001921 ORTHO05D001784 7.2e-07 57.8 74 47.3
BcaB01g02085 Brassica carinata HOM05D001921 ORTHO05D001784 9.4e-07 57.4 116 41.4
BcaB01g02086 Brassica carinata HOM05D001921 ORTHO05D001784 9.4e-07 57.4 116 41.4
DCAR_002429 Daucus carota HOM05D001921 ORTHO05D001784 1.2e-06 57.0 81 44.4
Duzib212G0985 Durio zibethinus HOM05D001921 ORTHO05D001784 1.2e-06 57.0 101 41.6
Gohir.A06G100200 Gossypium hirsutum HOM05D001921 ORTHO05D001784 1.2e-06 57.0 140 35.0
ECA246G3871 Erigeron canadensis HOM05D001921 ORTHO05D001784 1.6e-06 56.6 75 42.7
Potri.010G027500 Populus trichocarpa HOM05D001921 ORTHO05D001784 1.6e-06 56.6 135 35.6
TWI63G0810 Tripterygium wilfordii HOM05D001921 ORTHO05D001784 2.1e-06 56.2 135 36.3
CiPaw.07G227300 Carya illinoinensis HOM05D001921 ORTHO05D001784 3.6e-06 55.5 133 32.3
Hma1.2p1_0643F.1_g194540 Hydrangea macrophylla HOM05D001921 ORTHO05D001784 3.6e-06 55.5 92 39.1
Cfa013095 Carpinus fangiana HOM05D001921 ORTHO05D001784 4.7e-06 55.1 127 33.9
COL.COLO4_18922 Corchorus olitorius HOM05D001921 ORTHO05D001784 4.7e-06 55.1 144 34.7
Manes.15G019800 Manihot esculenta HOM05D001921 ORTHO05D001784 4.7e-06 55.1 135 35.6
TAR365G0872 Trochodendron aralioides HOM05D001921 ORTHO05D001784 4.7e-06 55.1 141 34.8
EL10Ac6g15007 Beta vulgaris HOM05D001921 ORTHO05D001784 6.1e-06 54.7 112 38.4
Cpa.g.sc16.79 Carica papaya HOM05D001921 ORTHO05D001784 7.9e-06 54.3 88 45.5
THA.LOC104826571 Tarenaya hassleriana HOM05D001921 ORTHO05D001784 7.9e-06 54.3 125 38.4


User provided reference genes

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