Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C04033 Eucalyptus grandis HOM05D007253 ORTHO05D009055 3.9e-71 271.6 155 100.0
PGR044G0212 Punica granatum HOM05D007253 ORTHO05D009055 2.1e-40 169.5 148 71.6
Prupe.1G396700 Prunus persica HOM05D007253 ORTHO05D009055 3.0e-39 165.6 156 69.9
Nn8g40104 Nelumbo nucifera HOM05D007253 ORTHO05D009055 6.6e-39 164.5 153 68.6
Potri.006G266800 Populus trichocarpa HOM05D007253 ORTHO05D009055 1.3e-37 160.2 152 69.7
Duzib168G0559 Durio zibethinus HOM05D007253 ORTHO05D009055 3.6e-37 158.7 123 79.7
Gohir.D05G063600 Gossypium hirsutum HOM05D007253 ORTHO05D009055 3.6e-37 158.7 153 66.7
COL.COLO4_18974 Corchorus olitorius HOM05D007253 ORTHO05D009055 4.8e-37 158.3 154 70.1
Dinv03404 Davidia involucrata HOM05D007253 ORTHO05D009055 1.1e-36 157.1 157 69.4
Gorai.009G064300 Gossypium raimondii HOM05D007253 ORTHO05D009055 1.8e-36 156.4 153 67.3
Thecc.09G013200 Theobroma cacao HOM05D007253 ORTHO05D009055 3.1e-36 155.6 158 69.0
TWI63G1073 Tripterygium wilfordii HOM05D007253 ORTHO05D009055 5.3e-36 154.8 153 68.6
Ciclev10009764m.g Citrus clementina HOM05D007253 ORTHO05D009055 6.9e-36 154.5 160 66.9
Atru.chr7.2576 Acer truncatum HOM05D007253 ORTHO05D009055 9.0e-36 154.1 158 62.0
RcHm_v2.0_Chr6g0299201 Rosa chinensis HOM05D007253 ORTHO05D009055 1.5e-35 153.3 154 66.9
CSS0046604 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 2.0e-35 152.9 156 64.7
CSS0050010 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 2.0e-35 152.9 156 64.7
ClCG05G016120 Citrullus lanatus HOM05D007253 ORTHO05D009055 2.0e-35 152.9 153 66.7
BcaB06g28020 Brassica carinata HOM05D007253 ORTHO05D009055 4.5e-35 151.8 146 74.0
BolC4t27019H Brassica oleracea HOM05D007253 ORTHO05D009055 4.5e-35 151.8 151 72.2
Duzib187G0122 Durio zibethinus HOM05D007253 ORTHO05D009055 4.5e-35 151.8 158 63.9
A04p19250 Brassica napus HOM05D007253 ORTHO05D009055 9.9e-35 150.6 144 73.6
BraA04t17525Z Brassica rapa HOM05D007253 ORTHO05D009055 9.9e-35 150.6 144 73.6
MD15G1043300 Malus domestica HOM05D007253 ORTHO05D009055 9.9e-35 150.6 155 67.1
Actinidia14140 Actinidia chinensis HOM05D007253 ORTHO05D009055 1.3e-34 150.2 157 63.7
Cpa.g.sc148.44 Carica papaya HOM05D007253 ORTHO05D009055 1.3e-34 150.2 153 67.3
Thhalv10000367m.g Eutrema salsugineum HOM05D007253 ORTHO05D009055 1.7e-34 149.8 144 72.2
FAN27G1409 Fragaria x ananassa HOM05D007253 ORTHO05D009055 2.2e-34 149.4 147 68.0
GSVIVG01035999001 Vitis vinifera HOM05D007253 ORTHO05D009055 2.2e-34 149.4 103 87.4
BcaC02g08395 Brassica carinata HOM05D007253 ORTHO05D009055 3.8e-34 148.7 146 72.6
C04p54740 Brassica napus HOM05D007253 ORTHO05D009055 3.8e-34 148.7 146 72.6
TAR626G1108 Trochodendron aralioides HOM05D007253 ORTHO05D009055 3.8e-34 148.7 147 63.9
FvH4_2g41340 Fragaria vesca HOM05D007253 ORTHO05D009055 4.9e-34 148.3 153 66.7
CiPaw.07G233200 Carya illinoinensis HOM05D007253 ORTHO05D009055 6.4e-34 147.9 153 65.4
Lsat_1_v5_gn_6_77860 Lactuca sativa HOM05D007253 ORTHO05D009055 8.4e-34 147.5 152 68.4
CSS0026470 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 1.9e-33 146.4 144 64.6
Cc08_g07700 Coffea canephora HOM05D007253 ORTHO05D009055 2.4e-33 146.0 156 66.0
MELO3C016946.2 Cucumis melo HOM05D007253 ORTHO05D009055 2.4e-33 146.0 151 64.9
FAN15G3156 Fragaria x ananassa HOM05D007253 ORTHO05D009055 2.4e-33 146.0 125 73.6
CSS0024958 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 4.2e-33 145.2 163 59.5
Sp4g03910 Schrenkiella parvula HOM05D007253 ORTHO05D009055 4.2e-33 145.2 144 70.8
Sc09g0010780 Simmondsia chinensis HOM05D007253 ORTHO05D009055 4.2e-33 145.2 155 65.2
CARHR116800 Cardamine hirsuta HOM05D007253 ORTHO05D009055 5.4e-33 144.8 100 88.0
HanXRQChr13g0413301 Helianthus annuus HOM05D007253 ORTHO05D009055 5.4e-33 144.8 154 64.3
MD08G1052200 Malus domestica HOM05D007253 ORTHO05D009055 5.4e-33 144.8 118 63.6
Psat5g033080 Pisum sativum HOM05D007253 ORTHO05D009055 7.1e-33 144.4 149 66.4
Carub.0004s0449 Capsella rubella HOM05D007253 ORTHO05D009055 1.2e-32 143.7 101 86.1
HPP92_010354 Vanilla planifolia HOM05D007253 ORTHO05D009055 1.2e-32 143.7 98 88.8
ATR0580G321 Amborella trichopoda HOM05D007253 ORTHO05D009055 2.1e-32 142.9 149 65.1
CANSAT35G1478 Cannabis sativa HOM05D007253 ORTHO05D009055 2.7e-32 142.5 154 64.9
SalBow8G5515 Salvia bowleyana HOM05D007253 ORTHO05D009055 2.7e-32 142.5 104 81.7
TPR.G1881 Trifolium pratense HOM05D007253 ORTHO05D009055 2.7e-32 142.5 149 64.4
Manes.03G007000 Manihot esculenta HOM05D007253 ORTHO05D009055 3.5e-32 142.1 153 68.0
Sed0002011 Sechium edule HOM05D007253 ORTHO05D009055 3.5e-32 142.1 145 63.4
AT2G24860 Arabidopsis thaliana HOM05D007253 ORTHO05D009055 7.9e-32 141.0 98 87.8
PSO063G6023 Papaver somniferum HOM05D007253 ORTHO05D009055 7.9e-32 141.0 102 83.3
CDE05G3047 Ceratophyllum demersum HOM05D007253 ORTHO05D009055 1.3e-31 140.2 98 88.8
Oeu023241.1 Olea europaea HOM05D007253 ORTHO05D009055 1.8e-31 139.8 153 64.1
Medtr3g105830 Medicago truncatula HOM05D007253 ORTHO05D009055 2.3e-31 139.4 147 63.3
AL4G15950 Arabidopsis lyrata HOM05D007253 ORTHO05D009055 3.0e-31 139.0 144 66.7
Hund25608 Selenicereus undatus HOM05D007253 ORTHO05D009055 3.0e-31 139.0 105 78.1
THA.LOC104803610 Tarenaya hassleriana HOM05D007253 ORTHO05D009055 3.9e-31 138.7 149 65.8
Aa31LG7G11560 Aethionema arabicum HOM05D007253 ORTHO05D009055 5.1e-31 138.3 149 65.8
Potri.018G016400 Populus trichocarpa HOM05D007253 ORTHO05D009055 5.1e-31 138.3 99 85.9
ECA240G1715 Erigeron canadensis HOM05D001941 ORTHO05D002198 6.7e-31 137.9 151 65.6
PSO782G0429 Papaver somniferum HOM05D007253 ORTHO05D009055 6.7e-31 137.9 102 82.4
Nitab4.5_0005450g0020 Nicotiana tabacum HOM05D007253 ORTHO05D009055 1.5e-30 136.7 147 59.9
Lj1g0002882 Lotus japonicus HOM05D007253 ORTHO05D009055 2.5e-30 136.0 156 59.0
SGA_v2.0_scaffold4G02163 Striga asiatica HOM05D007253 ORTHO05D009055 3.3e-30 135.6 99 82.8
MSTRG.13960 Avicennia marina HOM05D007253 ORTHO05D009055 7.4e-30 134.4 101 82.2
arahy.Tifrunner.gnm1.ann1.LF5WZD Arachis hypogaea HOM05D007253 ORTHO05D009055 1.3e-29 133.7 102 81.4
Migut.E01444 Erythranthe guttata HOM05D007253 ORTHO05D009055 1.6e-29 133.3 104 82.7
Ah.00g238170 Amaranthus hybridus HOM05D007253 ORTHO05D009055 2.1e-29 132.9 105 76.2
Ah.12g060580 Amaranthus hybridus HOM05D007253 ORTHO05D009055 2.1e-29 132.9 105 76.2
Aqoxy7G03301 Aquilegia oxysepala HOM05D007253 ORTHO05D009055 2.1e-29 132.9 162 48.8
Phvul.009G086100 Phaseolus vulgaris HOM05D007253 ORTHO05D009055 2.1e-29 132.9 152 61.8
EL10Ac2g02465 Beta vulgaris HOM05D007253 ORTHO05D009055 4.8e-29 131.7 107 76.6
Glyma.17G221800 Glycine max HOM05D007253 ORTHO05D009055 6.2e-29 131.3 108 76.9
arahy.Tifrunner.gnm1.ann1.2K72KI Arachis hypogaea HOM05D007253 ORTHO05D009055 1.1e-28 130.6 105 75.2
arahy.Tifrunner.gnm1.ann1.G7TND8 Arachis hypogaea HOM05D007253 ORTHO05D009055 1.1e-28 130.6 105 76.2
CDE02G4354 Ceratophyllum demersum HOM05D007253 ORTHO05D009055 1.4e-28 130.2 94 87.2
Glyma.04G059900 Glycine max HOM05D007253 ORTHO05D009055 1.8e-28 129.8 98 78.6
Lalb_Chr23g0268151 Lupinus albus HOM05D007253 ORTHO05D009055 1.8e-28 129.8 150 58.7
Nitab4.5_0000264g0020 Nicotiana tabacum HOM05D007253 ORTHO05D009055 1.8e-28 129.8 147 60.5
Glyma.06G060300 Glycine max HOM05D007253 ORTHO05D009055 3.1e-28 129.0 133 66.2
vmacro05116 Vaccinium macrocarpon HOM05D007253 ORTHO05D009055 4.0e-28 128.6 139 64.7
MBI14_g31385_MAGBIO Magnolia biondii HOM05D007253 ORTHO05D009055 5.3e-28 128.3 97 80.4
Glyma.14G104200 Glycine max HOM05D007253 ORTHO05D009055 2.0e-27 126.3 145 62.1
Os09g0423700 Oryza sativa ssp. japonica HOM05D007253 ORTHO05D009055 2.0e-27 126.3 96 79.2
unitig_32.g11120 Utricularia gibba HOM05D007253 ORTHO05D009055 2.0e-27 126.3 98 80.6
DCAR_000661 Daucus carota HOM05D007253 ORTHO05D009055 3.4e-27 125.6 102 79.4
Zm00001eb313320 Zea mays HOM05D007253 ORTHO05D009055 3.4e-27 125.6 82 70.7
CAN.G285.13 Capsicum annuum HOM05D007253 ORTHO05D009055 4.5e-27 125.2 152 55.9
Sopen08g002570 Solanum pennellii HOM05D007253 ORTHO05D009055 1.4e-25 120.2 98 74.5
Solyc08g006620.3 Solanum lycopersicum HOM05D007253 ORTHO05D009055 3.2e-25 119.0 152 57.2
SEGI_37228 Sequoiadendron giganteum HOM05D007253 ORTHO05D009055 1.0e-23 114.0 98 74.5
AagrBONN_evm.TU.Sc2ySwM_117.2542 Anthoceros agrestis HOM05D007253 ORTHO05D009055 1.3e-23 113.6 90 76.7
Pp3c6_11160 Physcomitrium patens HOM05D007253 ORTHO05D009055 1.6e-21 106.7 89 74.2
Mapoly0121s0030 Marchantia polymorpha HOM05D007253 ORTHO05D009055 2.8e-21 105.9 95 68.4
TAR383G0216 Trochodendron aralioides HOM05D007253 ORTHO05D009055 8.2e-21 104.4 79 81.0
Peaxi162Scf00045g01937 Petunia axillaris HOM05D007253 ORTHO05D009055 4.0e-20 102.1 147 52.4
SMO196G0205 Selaginella moellendorffii HOM05D007253 ORTHO05D009055 1.5e-19 100.1 83 73.5
AUR62032436 Chenopodium quinoa HOM05D007253 ORTHO05D009055 2.0e-19 99.8 77 80.5
PGSC0003DMG400026305 Solanum tuberosum HOM05D005612 ORTHO05D007014 2.5e-17 92.8 111 57.7
Gohir.A05G061100 Gossypium hirsutum HOM05D007253 ORTHO05D009055 7.9e-16 87.8 92 54.3
Cfa013009 Carpinus fangiana HOM05D018710 ORTHO05D009055 2.0e-06 56.6 101 40.6
Haze_21370 Corylus avellana HOM05D007253 ORTHO05D009055 2.5e-06 56.2 89 43.8


User provided reference genes

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