Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C04032 Eucalyptus grandis HOM05D007019 ORTHO05D008398 1.2e-270 936.0 498 100.0
Manes.16G132200 Manihot esculenta HOM05D007019 ORTHO05D008398 9.1e-199 697.2 493 74.2
CiPaw.07G232900 Carya illinoinensis HOM05D007019 ORTHO05D008398 2.3e-194 682.6 494 73.1
PGR044G2245 Punica granatum HOM05D007019 ORTHO05D008398 1.5e-193 679.9 501 73.7
Atru.chr7.2574 Acer truncatum HOM05D007019 ORTHO05D008398 1.4e-191 673.3 497 72.0
Gorai.009G064200 Gossypium raimondii HOM05D007019 ORTHO05D008398 5.9e-190 667.9 497 72.4
Cfa013011 Carpinus fangiana HOM05D007019 ORTHO05D008398 7.8e-190 667.5 497 72.8
QL02p018053 Quercus lobata HOM05D007019 ORTHO05D008398 2.5e-188 662.5 493 72.2
Potri.018G016200 Populus trichocarpa HOM05D007019 ORTHO05D008398 7.3e-188 661.0 496 71.6
Cc00_g05220 Coffea canephora HOM05D007019 ORTHO05D008398 1.2e-187 660.2 497 70.2
Actinidia14141 Actinidia chinensis HOM05D007019 ORTHO05D008398 2.8e-187 659.1 495 70.7
Thecc.09G013400 Theobroma cacao HOM05D007019 ORTHO05D008398 6.2e-187 657.9 498 71.3
Prupe.1G396900 Prunus persica HOM05D007019 ORTHO05D008398 4.0e-186 655.2 497 71.6
TWI32G0429 Tripterygium wilfordii HOM05D007019 ORTHO05D008398 4.0e-186 655.2 493 70.8
Lj6g0025581 Lotus japonicus HOM05D007019 ORTHO05D008398 2.0e-185 652.9 494 70.4
Lj7A737G40 Lonicera japonica HOM05D007019 ORTHO05D008398 9.8e-185 650.6 512 69.1
Duzib168G1437 Durio zibethinus HOM05D007019 ORTHO05D008398 8.3e-184 647.5 500 70.6
Rhsim02G0217600 Rhododendron simsii HOM05D007019 ORTHO05D008398 8.3e-184 647.5 498 69.5
CSS0016918 Camellia sinensis var. sinensis HOM05D007019 ORTHO05D008398 1.4e-183 646.7 495 70.7
CSS0023374 Camellia sinensis var. sinensis HOM05D007019 ORTHO05D008398 1.4e-183 646.7 495 70.7
Hma1.2p1_0737F.1_g210790 Hydrangea macrophylla HOM05D007019 ORTHO05D008398 2.4e-183 646.0 499 69.7
Gohir.D05G063200 Gossypium hirsutum HOM05D007019 ORTHO05D008398 7.0e-183 644.4 497 70.6
arahy.Tifrunner.gnm1.ann1.MG10WM Arachis hypogaea HOM05D007019 ORTHO05D008398 2.0e-182 642.9 494 70.4
arahy.Tifrunner.gnm1.ann1.SS16UG Arachis hypogaea HOM05D007019 ORTHO05D008398 1.0e-181 640.6 494 70.2
Gohir.A05G061000 Gossypium hirsutum HOM05D007019 ORTHO05D008398 6.6e-181 637.9 497 70.2
FvH4_2g41350 Fragaria vesca HOM05D007019 ORTHO05D008398 3.3e-180 635.6 494 69.0
COL.COLO4_18972 Corchorus olitorius HOM05D007019 ORTHO05D008398 1.6e-179 633.3 499 69.9
CANSAT25G0065 Cannabis sativa HOM05D007019 ORTHO05D008398 2.3e-178 629.4 500 67.6
Psat5g174160 Pisum sativum HOM05D007019 ORTHO05D008398 1.5e-177 626.7 495 67.1
Lalb_Chr15g0081591 Lupinus albus HOM05D007019 ORTHO05D008398 7.5e-177 624.4 494 68.0
Glyma.18G091000 Glycine max HOM05D007019 ORTHO05D008398 1.7e-176 623.2 494 68.6
Ciclev10008089m.g Citrus clementina HOM05D007019 ORTHO05D008398 4.9e-176 621.7 497 68.4
RcHm_v2.0_Chr6g0299181 Rosa chinensis HOM05D007019 ORTHO05D008398 8.3e-176 620.9 494 67.8
DCAR_003030 Daucus carota HOM05D007019 ORTHO05D008398 1.4e-175 620.2 500 66.4
MSTRG.1627 Avicennia marina HOM05D007019 ORTHO05D008398 1.2e-174 617.1 498 67.7
Nn6g33490 Nelumbo nucifera HOM05D007019 ORTHO05D008398 3.0e-173 612.5 510 65.7
Oeu021907.1 Olea europaea HOM05D007019 ORTHO05D008398 1.1e-172 610.5 497 66.4
FAN27G2994 Fragaria x ananassa HOM05D007019 ORTHO05D008398 3.3e-172 609.0 490 67.6
PGSC0003DMG400014784 Solanum tuberosum HOM05D007019 ORTHO05D008398 5.6e-172 608.2 495 65.3
ClCG08G013800 Citrullus lanatus HOM05D007019 ORTHO05D008398 7.3e-172 607.8 503 67.8
Medtr3g053700 Medicago truncatula HOM05D007019 ORTHO05D008398 7.3e-172 607.8 494 66.6
Sabra18G0019700 Salix brachista HOM05D007019 ORTHO05D008398 9.5e-172 607.4 525 65.3
Solyc08g068820.3 Solanum lycopersicum HOM05D007019 ORTHO05D008398 9.5e-172 607.4 495 64.4
Glyma.08G321000 Glycine max HOM05D007019 ORTHO05D008398 2.1e-171 606.3 501 66.7
MELO3C011312.2 Cucumis melo HOM05D007019 ORTHO05D008398 1.3e-168 597.0 501 66.5
VMungo0540G1233 Vigna mungo HOM05D007019 ORTHO05D008398 1.3e-168 597.0 496 66.7
unitig_46.g18223 Utricularia gibba HOM05D007019 ORTHO05D008398 8.4e-168 594.3 499 63.7
Phvul.006G047900 Phaseolus vulgaris HOM05D007019 ORTHO05D008398 1.4e-167 593.6 496 66.5
CsaV3_2G032590 Cucumis sativus L. HOM05D007019 ORTHO05D008398 2.1e-166 589.7 501 65.9
MBI14_g16432_MAGBIO Magnolia biondii HOM05D007019 ORTHO05D008398 4.6e-166 588.6 511 65.2
TPR.G32253 Trifolium pratense HOM05D007019 ORTHO05D008398 6.0e-166 588.2 495 64.6
Sed0002524 Sechium edule HOM05D007019 ORTHO05D008398 7.8e-166 587.8 507 64.9
Hund25606 Selenicereus undatus HOM05D007019 ORTHO05D008398 7.8e-166 587.8 518 63.3
Migut.E01445 Erythranthe guttata HOM05D007019 ORTHO05D008398 1.5e-164 583.6 499 62.9
Ca_26389_v3 Cicer arietinum L. HOM05D007019 ORTHO05D008398 1.2e-163 580.5 494 65.0
CAN.G273.24 Capsicum annuum HOM05D007019 ORTHO05D008398 2.8e-163 579.3 495 63.0
HanXRQChr03g0084841 Helianthus annuus HOM05D007019 ORTHO05D008398 5.2e-162 575.1 521 63.0
Cpa.g.sc148.46 Carica papaya HOM05D007019 ORTHO05D008398 2.0e-161 573.2 500 65.0
Aqoxy7G03288 Aquilegia oxysepala HOM05D007019 ORTHO05D008398 3.8e-160 568.9 498 61.2
FAN15G0718 Fragaria x ananassa HOM05D007019 ORTHO05D008398 1.9e-159 566.6 517 62.9
EL10Ac2g02454 Beta vulgaris HOM05D007019 ORTHO05D008398 1.6e-158 563.5 547 59.8
ECA240G4302 Erigeron canadensis HOM05D007019 ORTHO05D008398 3.0e-157 559.3 519 61.5
THA.LOC104819948 Tarenaya hassleriana HOM05D007019 ORTHO05D008398 3.0e-157 559.3 514 61.3
PSO731G0070 Papaver somniferum HOM05D007019 ORTHO05D008398 1.3e-155 553.9 502 60.4
Lsat_1_v5_gn_6_78060 Lactuca sativa HOM05D007019 ORTHO05D008398 2.8e-155 552.7 506 61.9
Nitab4.5_0000406g0110 Nicotiana tabacum HOM05D007019 ORTHO05D008398 4.8e-155 552.0 500 61.2
Sc23g0006120 Simmondsia chinensis HOM05D007019 ORTHO05D008398 1.8e-154 550.1 514 61.5
Sp4g03850 Schrenkiella parvula HOM05D007019 ORTHO05D008398 5.3e-154 548.5 507 60.7
PSO210G0129 Papaver somniferum HOM05D007019 ORTHO05D008398 6.9e-154 548.1 510 59.2
ATR0580G102 Amborella trichopoda HOM05D007019 ORTHO05D008398 1.2e-153 547.4 511 59.1
CDE04G0815 Ceratophyllum demersum HOM05D007019 ORTHO05D008398 1.2e-153 547.4 509 58.3
SGA_v2.0_scaffold169G38600 Striga asiatica HOM05D007019 ORTHO05D008398 9.9e-153 544.3 510 59.6
Zm00001eb257650 Zea mays HOM05D007019 ORTHO05D008398 2.7e-150 536.2 501 60.5
Aa31LG7G11570 Aethionema arabicum HOM05D007019 ORTHO05D008398 1.3e-149 533.9 506 60.3
Thhalv10000137m.g Eutrema salsugineum HOM05D007019 ORTHO05D008398 3.9e-149 532.3 509 60.7
Carub.0004s0445 Capsella rubella HOM05D007019 ORTHO05D008398 5.1e-149 531.9 509 58.3
AUR62032443 Chenopodium quinoa HOM05D007019 ORTHO05D008398 8.7e-149 531.2 522 59.4
CARHR294580 Cardamine hirsuta HOM05D007019 ORTHO05D008398 1.3e-147 527.3 511 59.1
AT2G24830 Arabidopsis thaliana HOM05D007019 ORTHO05D008398 8.1e-147 524.6 512 59.2
Sopen08g022560 Solanum pennellii HOM05D007019 ORTHO05D008398 8.1e-147 524.6 402 65.9
AUR62024776 Chenopodium quinoa HOM05D007019 ORTHO05D008398 5.5e-143 511.9 542 56.5
Nitab4.5_0012106g0030 Nicotiana tabacum HOM05D007019 ORTHO05D008398 9.3e-143 511.1 499 58.5
BraA09t41004Z Brassica rapa HOM05D007019 ORTHO05D008398 4.6e-142 508.8 506 58.7
A09p56090 Brassica napus HOM05D007019 ORTHO05D008398 7.9e-142 508.1 505 59.6
HPP92_010745 Vanilla planifolia HOM05D007019 ORTHO05D008398 7.9e-142 508.1 513 56.1
vmacro11274 Vaccinium macrocarpon HOM05D007019 ORTHO05D008398 3.9e-141 505.8 495 59.6
A09p56030 Brassica napus HOM05D007019 ORTHO05D008398 3.1e-138 496.1 503 58.3
C08p39020 Brassica napus HOM05D007019 ORTHO05D008398 9.0e-138 494.6 506 58.1
BolC8t51475H Brassica oleracea HOM05D007019 ORTHO05D008398 1.2e-137 494.2 506 57.9
AL4G15870 Arabidopsis lyrata HOM05D007019 ORTHO05D008398 3.8e-136 489.2 506 56.1
TAR636G0280 Trochodendron aralioides HOM05D007019 ORTHO05D008398 1.9e-132 476.9 353 70.8
BcaC07g40903 Brassica carinata HOM05D007019 ORTHO05D008398 3.7e-131 472.6 496 57.1
MD08G1051900 Malus domestica HOM05D007019 ORTHO05D008398 1.7e-128 463.8 359 70.2
SEGI_04420 Sequoiadendron giganteum HOM05D007019 ORTHO05D008398 2.7e-126 456.4 513 52.4
Dinv03401 Davidia involucrata HOM05D007019 ORTHO05D008398 3.3e-124 449.5 364 69.5
Hma1.2p1_0737F.1_g210800 Hydrangea macrophylla HOM05D007019 ORTHO05D008398 7.7e-113 411.8 331 68.6
Pp3c21_5730 Physcomitrium patens HOM05D007019 ORTHO05D008398 1.3e-104 384.4 518 45.4
Mapoly0067s0020 Marchantia polymorpha HOM05D007019 ORTHO05D008398 8.5e-104 381.7 513 44.1
SMO116G0382 Selaginella moellendorffii HOM05D007019 ORTHO05D008398 8.2e-99 365.2 499 46.3
SHI21092 Sapria himalayana HOM05D007019 ORTHO05D008398 3.5e-97 359.8 577 43.2
Dinv10229 Davidia involucrata HOM05D007019 ORTHO05D008398 1.8e-93 347.4 353 59.5
GSVIVG01036005001 Vitis vinifera HOM05D007019 ORTHO05D008398 2.1e-70 270.8 187 72.2
AagrBONN_evm.TU.Sc2ySwM_117.1463 Anthoceros agrestis HOM05D007019 ORTHO05D008398 3.4e-68 263.5 358 45.8
CBR_g30106 Chara braunii HOM05D007019 ORTHO05D008398 2.2e-59 234.2 562 34.3
SalBow6G1623 Salvia bowleyana HOM05D007019 ORTHO05D008398 4.3e-47 193.4 188 59.6
Peaxi162Scf01419g00115 Petunia axillaris HOM05D007019 ORTHO05D008398 8.7e-40 169.1 142 59.9
SMO116G0105 Selaginella moellendorffii HOM05D007019 ORTHO05D008398 6.7e-32 142.9 323 37.8
Os02g0793000 Oryza sativa ssp. japonica HOM05D007019 ORTHO05D008398 1.2e-28 132.1 108 55.6
SMO269G0003 Selaginella moellendorffii HOM05D007019 ORTHO05D008398 1.3e-24 118.6 342 33.6
AagrBONN_evm.TU.Sc2ySwM_117.1462 Anthoceros agrestis HOM05D007019 ORTHO05D008398 2.9e-19 100.9 150 41.3
CSS0028433 Camellia sinensis var. sinensis HOM05D004574 ORTHO05D005612 7.4e-07 59.7 53 52.8
Nn2g12259 Nelumbo nucifera HOM05D004574 ORTHO05D005612 7.4e-07 59.7 69 44.9
Eucgr.L02934 Eucalyptus grandis HOM05D004574 ORTHO05D005612 9.7e-07 59.3 94 39.4
Lsat_1_v5_gn_5_90461 Lactuca sativa HOM05D004574 ORTHO05D005612 9.7e-07 59.3 49 57.1
Cre07.g355700 Chlamydomonas reinhardtii HOM05D007019 ORTHO05D008398 1.6e-06 58.5 260 26.2
Manes.14G139500 Manihot esculenta HOM05D004574 ORTHO05D005612 2.8e-06 57.8 109 38.5
Glyma.13G156900 Glycine max HOM05D004574 ORTHO05D005612 3.7e-06 57.4 84 44.0
Glyma.17G104500 Glycine max HOM05D004574 ORTHO05D005612 3.7e-06 57.4 84 44.0
Cc06_g07390 Coffea canephora HOM05D004574 ORTHO05D005612 4.8e-06 57.0 49 57.1
ECA234G1322 Erigeron canadensis HOM05D004574 ORTHO05D005612 4.8e-06 57.0 49 53.1
CAN.G518.8 Capsicum annuum HOM05D004574 ORTHO05D005612 6.3e-06 56.6 51 51.0
MD15G1158500 Malus domestica HOM05D004574 ORTHO05D005612 6.3e-06 56.6 79 41.8
Solyc07g007040.4 Solanum lycopersicum HOM05D004574 ORTHO05D005612 6.3e-06 56.6 51 51.0
Sopen07g003110 Solanum pennellii HOM05D004574 ORTHO05D005612 6.3e-06 56.6 51 51.0
CANSAT11G2415 Cannabis sativa HOM05D004574 ORTHO05D005612 8.2e-06 56.2 87 36.8
Medtr4g116570 Medicago truncatula HOM05D004574 ORTHO05D005612 8.2e-06 56.2 101 40.6


User provided reference genes

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