Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C04010 Eucalyptus grandis HOM05D006706 ORTHO05D008794 4.6e-94 347.8 170 100.0
RcHm_v2.0_Chr1g0366021 Rosa chinensis HOM05D006706 ORTHO05D008794 1.8e-61 239.6 171 70.8
FAN27G0070 Fragaria x ananassa HOM05D006706 ORTHO05D008794 8.8e-61 237.3 169 71.0
RcHm_v2.0_Chr6g0305051 Rosa chinensis HOM05D006706 ORTHO05D008794 1.5e-60 236.5 152 76.3
FAN20G0608 Fragaria x ananassa HOM05D006706 ORTHO05D008794 2.6e-60 235.7 169 70.4
Prupe.1G459500 Prunus persica HOM05D006706 ORTHO05D008794 3.4e-60 235.3 149 77.9
Potri.018G008000 Populus trichocarpa HOM05D006706 ORTHO05D008794 4.4e-60 235.0 178 66.3
FvH4_2g36680 Fragaria vesca HOM05D006706 ORTHO05D008794 5.7e-60 234.6 169 70.4
Rhsim07G0178100 Rhododendron simsii HOM05D006706 ORTHO05D008794 5.7e-60 234.6 133 79.7
PGR044G2738 Punica granatum HOM05D006706 ORTHO05D008794 9.8e-60 233.8 173 69.9
Sabra18G0015100 Salix brachista HOM05D006706 ORTHO05D008794 1.7e-59 233.0 177 65.5
MD08G1127800 Malus domestica HOM05D006706 ORTHO05D008794 2.8e-59 232.3 143 79.7
Gorai.010G122100 Gossypium raimondii HOM05D006706 ORTHO05D008794 8.3e-59 230.7 174 68.4
Haze_21755 Corylus avellana HOM05D006706 ORTHO05D008794 1.1e-58 230.3 176 67.0
Nitab4.5_0010092g0010 Nicotiana tabacum HOM05D006706 ORTHO05D008794 5.4e-58 228.0 121 86.8
Solyc12g096390.2 Solanum lycopersicum HOM05D006706 ORTHO05D008794 9.2e-58 227.3 128 82.8
Psat0s1809g0040 Pisum sativum HOM05D006706 ORTHO05D008794 1.6e-57 226.5 156 68.6
QL12p025335 Quercus lobata HOM05D006706 ORTHO05D008794 1.6e-57 226.5 176 67.0
Sopen12g032240 Solanum pennellii HOM05D006706 ORTHO05D008794 2.0e-57 226.1 118 88.1
Lj7C748T8 Lonicera japonica HOM05D006706 ORTHO05D008794 2.7e-57 225.7 161 72.0
PGSC0003DMG400029370 Solanum tuberosum HOM05D006706 ORTHO05D008794 2.7e-57 225.7 118 87.3
CSS0022194 Camellia sinensis var. sinensis HOM05D006706 ORTHO05D008794 3.5e-57 225.3 152 71.7
TPR.G12362 Trifolium pratense HOM05D006706 ORTHO05D008794 3.5e-57 225.3 150 72.0
TWI34G0378 Tripterygium wilfordii HOM05D006706 ORTHO05D008794 3.5e-57 225.3 141 78.0
Nitab4.5_0001159g0140 Nicotiana tabacum HOM05D006706 ORTHO05D008794 4.5e-57 224.9 121 86.0
CAN.G566.65 Capsicum annuum HOM05D006706 ORTHO05D008794 5.9e-57 224.6 153 71.9
Peaxi162Scf00459g00840 Petunia axillaris HOM05D006706 ORTHO05D008794 5.9e-57 224.6 118 88.1
Ca_15656_v3 Cicer arietinum L. HOM05D006706 ORTHO05D008794 1.0e-56 223.8 151 71.5
Duzib187G1270 Durio zibethinus HOM05D006706 ORTHO05D008794 1.0e-56 223.8 141 78.0
Haze_21752 Corylus avellana HOM05D006706 ORTHO05D008794 1.3e-56 223.4 118 86.4
Thecc.09G008100 Theobroma cacao HOM05D006706 ORTHO05D008794 1.3e-56 223.4 188 62.2
CANSAT78G2093 Cannabis sativa HOM05D006706 ORTHO05D008794 1.7e-56 223.0 154 73.4
Dinv26561 Davidia involucrata HOM05D006706 ORTHO05D008794 1.7e-56 223.0 165 66.7
AUR62020287 Chenopodium quinoa HOM05D006706 ORTHO05D008794 2.3e-56 222.6 142 75.4
Actinidia22256 Actinidia chinensis HOM05D006706 ORTHO05D008794 2.9e-56 222.2 160 69.4
Ca_15664_v3 Cicer arietinum L. HOM05D006706 ORTHO05D008794 2.9e-56 222.2 134 76.1
Cfa013279 Carpinus fangiana HOM05D006706 ORTHO05D008794 3.8e-56 221.9 174 66.1
Glyma.04G075900 Glycine max HOM05D006706 ORTHO05D008794 3.8e-56 221.9 151 71.5
Lj1g0012669 Lotus japonicus HOM05D006706 ORTHO05D008794 6.6e-56 221.1 148 72.3
Cpa.g.sc23.24 Carica papaya HOM05D006706 ORTHO05D008794 8.6e-56 220.7 128 78.9
CiPaw.08G020300 Carya illinoinensis HOM05D006706 ORTHO05D008794 8.6e-56 220.7 158 69.6
Glyma.06G077100 Glycine max HOM05D006706 ORTHO05D008794 8.6e-56 220.7 150 72.7
COL.COLO4_19024 Corchorus olitorius HOM05D006706 ORTHO05D008794 1.1e-55 220.3 131 77.9
Lsat_1_v5_gn_3_19441 Lactuca sativa HOM05D006706 ORTHO05D008794 1.1e-55 220.3 144 74.3
AT5G10700 Arabidopsis thaliana HOM05D006706 ORTHO05D008794 1.5e-55 219.9 145 69.7
Ciclev10009845m.g Citrus clementina HOM05D006706 ORTHO05D008794 1.5e-55 219.9 139 79.1
DCAR_006314 Daucus carota HOM05D006706 ORTHO05D008794 1.5e-55 219.9 133 75.2
THA.LOC104814973 Tarenaya hassleriana HOM05D006706 ORTHO05D008794 1.5e-55 219.9 132 76.5
arahy.Tifrunner.gnm1.ann1.G0PQAF Arachis hypogaea HOM05D006706 ORTHO05D008794 3.3e-55 218.8 182 60.4
Duzib168G0001 Durio zibethinus HOM05D006706 ORTHO05D008794 3.3e-55 218.8 183 63.9
Manes.03G004300 Manihot esculenta HOM05D006706 ORTHO05D008794 3.3e-55 218.8 132 77.3
AL6G21240 Arabidopsis lyrata HOM05D006706 ORTHO05D008794 4.3e-55 218.4 132 77.3
VMungo1309G0608 Vigna mungo HOM05D006706 ORTHO05D008794 4.3e-55 218.4 171 64.9
BcaB01g06271 Brassica carinata HOM05D006706 ORTHO05D008794 5.6e-55 218.0 150 69.3
HanXRQChr17g0538031 Helianthus annuus HOM05D006706 ORTHO05D008794 7.3e-55 217.6 149 71.8
Hund07113 Selenicereus undatus HOM05D006706 ORTHO05D008794 7.3e-55 217.6 118 83.1
Lalb_Chr23g0269141 Lupinus albus HOM05D006706 ORTHO05D008794 9.5e-55 217.2 152 71.1
Medtr3g108900 Medicago truncatula HOM05D006706 ORTHO05D008794 9.5e-55 217.2 178 63.5
ECA246G3311 Erigeron canadensis HOM05D006706 ORTHO05D008794 1.2e-54 216.9 143 72.0
Nn3g19671 Nelumbo nucifera HOM05D006706 ORTHO05D008794 1.2e-54 216.9 193 59.6
vmacro05047 Vaccinium macrocarpon HOM05D006706 ORTHO05D008794 1.2e-54 216.9 132 78.8
Migut.A00436 Erythranthe guttata HOM05D006706 ORTHO05D008794 1.6e-54 216.5 145 72.4
Atru.chr7.2653 Acer truncatum HOM05D006706 ORTHO05D008794 2.1e-54 216.1 119 83.2
arahy.Tifrunner.gnm1.ann1.92NGGW Arachis hypogaea HOM05D006706 ORTHO05D008794 2.1e-54 216.1 134 73.9
Sp6g32760 Schrenkiella parvula HOM05D006706 ORTHO05D008794 2.1e-54 216.1 132 75.8
GSVIVG01035513001 Vitis vinifera HOM05D006706 ORTHO05D008794 2.1e-54 216.1 154 66.9
A03p04700 Brassica napus HOM05D006706 ORTHO05D008794 2.8e-54 215.7 137 73.7
BraA03t09810Z Brassica rapa HOM05D006706 ORTHO05D008794 2.8e-54 215.7 150 68.0
Thhalv10014763m.g Eutrema salsugineum HOM05D006706 ORTHO05D008794 3.6e-54 215.3 127 76.4
SalBow4G1165 Salvia bowleyana HOM05D006706 ORTHO05D008794 3.6e-54 215.3 119 81.5
CARHR202620 Cardamine hirsuta HOM05D006706 ORTHO05D008794 6.1e-54 214.5 131 75.6
Carub.0006s0917 Capsella rubella HOM05D006706 ORTHO05D008794 8.0e-54 214.2 142 71.8
MSTRG.25780 Avicennia marina HOM05D006706 ORTHO05D008794 1.4e-53 213.4 155 68.4
Oeu018568.1 Olea europaea HOM05D006706 ORTHO05D008794 1.8e-53 213.0 118 84.7
Aa31LG3G16430 Aethionema arabicum HOM05D006706 ORTHO05D008794 2.3e-53 212.6 159 66.7
BcaB01g05507 Brassica carinata HOM05D006706 ORTHO05D008794 4.0e-53 211.8 150 67.3
BcaC04g19291 Brassica carinata HOM05D006706 ORTHO05D008794 4.0e-53 211.8 119 79.0
C03p05410 Brassica napus HOM05D006706 ORTHO05D008794 4.0e-53 211.8 150 67.3
ATR0580G320 Amborella trichopoda HOM05D006706 ORTHO05D008794 5.2e-53 211.5 119 82.4
Sed0007748 Sechium edule HOM05D006706 ORTHO05D008794 5.2e-53 211.5 149 69.8
PSO063G0792 Papaver somniferum HOM05D006706 ORTHO05D008794 8.9e-53 210.7 118 82.2
PSO170G0804 Papaver somniferum HOM05D006706 ORTHO05D008794 8.9e-53 210.7 118 82.2
CsaV3_2G031370 Cucumis sativus L. HOM05D006706 ORTHO05D008794 1.2e-52 210.3 135 74.1
MBI14_g10732_MAGBIO Magnolia biondii HOM05D006706 ORTHO05D008794 2.0e-52 209.5 142 73.2
Aqoxy7G02908 Aquilegia oxysepala HOM05D006706 ORTHO05D008794 2.6e-52 209.1 119 79.0
MELO3C011186.2 Cucumis melo HOM05D006706 ORTHO05D008794 3.4e-52 208.8 148 68.9
Zm00001eb071580 Zea mays HOM05D006706 ORTHO05D008794 4.4e-52 208.4 172 61.0
Phvul.009G101700 Phaseolus vulgaris HOM05D006706 ORTHO05D008794 7.5e-52 207.6 125 76.0
CiPaw.07G211900 Carya illinoinensis HOM05D006706 ORTHO05D008794 1.3e-51 206.8 115 82.6
SEGI_18071 Sequoiadendron giganteum HOM05D006706 ORTHO05D008794 3.7e-51 205.3 119 74.8
CDE02G4751 Ceratophyllum demersum HOM05D006706 ORTHO05D008794 1.1e-50 203.8 160 64.4
Os04g0605200 Oryza sativa ssp. japonica HOM05D006706 ORTHO05D008794 3.2e-50 202.2 120 76.7
AUR62037716 Chenopodium quinoa HOM05D006706 ORTHO05D008794 1.6e-49 199.9 129 73.6
HPP92_021967 Vanilla planifolia HOM05D006706 ORTHO05D008794 1.9e-47 193.0 132 72.0
HPP92_021941 Vanilla planifolia HOM05D006706 ORTHO05D008794 7.3e-47 191.0 132 71.2
AagrBONN_evm.TU.Sc2ySwM_228.645 Anthoceros agrestis HOM05D000036 ORTHO05D038461 9.5e-47 190.7 132 68.2
SMO203G0167 Selaginella moellendorffii HOM05D006706 ORTHO05D008794 8.0e-46 187.6 126 67.5
SGA_v2.0_scaffold193G40663 Striga asiatica HOM05D006706 ORTHO05D008794 3.1e-45 185.7 161 59.6
Pp3c18_3890 Physcomitrium patens HOM05D006706 ORTHO05D008794 4.0e-45 185.3 142 60.6
Mapoly0013s0161 Marchantia polymorpha HOM05D006706 ORTHO05D008794 1.4e-42 176.8 130 61.5
MD15G1107200 Malus domestica HOM05D006706 ORTHO05D008794 2.4e-42 176.0 164 61.0
ClCG08G012660 Citrullus lanatus HOM05D006706 ORTHO05D008794 3.5e-41 172.2 147 60.5
Ah.10g024780 Amaranthus hybridus HOM05D006706 ORTHO05D008794 2.3e-40 169.5 152 56.6
unitig_21.g20325 Utricularia gibba HOM05D006706 ORTHO05D008794 1.4e-37 160.2 159 55.3
CBR_g3167 Chara braunii HOM05D006706 ORTHO05D008794 5.2e-37 158.3 159 49.1
Cre10.g449350 Chlamydomonas reinhardtii HOM05D006706 ORTHO05D008794 6.8e-37 157.9 131 55.7
MCO07G367 Micromonas commoda HOM05D006706 ORTHO05D008794 6.4e-35 151.4 129 54.3
Gohir.A06G105300 Gossypium hirsutum HOM05D006706 ORTHO05D008794 2.2e-27 126.3 109 60.6
Gohir.D06G107400 Gossypium hirsutum HOM05D006706 ORTHO05D008794 8.4e-27 124.4 113 59.3
Sc06g0000170 Simmondsia chinensis HOM05D006706 ORTHO05D008794 9.6e-23 110.9 59 81.4
PRCOL_00004161 Prasinoderma coloniale HOM05D006706 ORTHO05D008794 2.8e-22 109.4 132 47.0
TAR636G3689 Trochodendron aralioides HOM05D006706 ORTHO05D008794 1.4e-21 107.1 132 48.5
EL10Ac2g02413 Beta vulgaris HOM05D006706 ORTHO05D008794 5.2e-21 105.1 80 62.5
Haze_27087 Corylus avellana HOM05D006706 ORTHO05D008794 2.6e-20 102.8 116 47.4
CDE06G2578 Ceratophyllum demersum HOM05D006706 ORTHO05D008794 5.1e-16 88.6 61 62.3
A10p26910 Brassica napus HOM05D006706 ORTHO05D028018 1.1e-10 70.9 44 75.0
Sed0005624 Sechium edule HOM05D006706 ORTHO05D373521 1.3e-06 57.4 60 46.7


User provided reference genes

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