Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C04007 Eucalyptus grandis HOM05D006939 ORTHO05D008616 6.1e-180 634.0 322 100.0
Dinv25196 Davidia involucrata HOM05D006939 ORTHO05D008616 2.9e-137 492.3 323 75.2
QL12p025112 Quercus lobata HOM05D006939 ORTHO05D008616 8.4e-137 490.7 320 76.9
CSS0002269 Camellia sinensis var. sinensis HOM05D006939 ORTHO05D008616 7.1e-136 487.6 328 75.0
CiPaw.07G213000 Carya illinoinensis HOM05D006939 ORTHO05D008616 1.2e-135 486.9 316 78.2
Ca_15668_v3 Cicer arietinum L. HOM05D006939 ORTHO05D008616 2.7e-135 485.7 319 74.9
PGR044G1028 Punica granatum HOM05D006939 ORTHO05D008616 3.9e-134 481.9 323 77.1
Nn8g40552 Nelumbo nucifera HOM05D006939 ORTHO05D008616 2.0e-130 469.5 323 72.1
Thecc.09G006900 Theobroma cacao HOM05D006939 ORTHO05D008616 3.4e-130 468.8 318 72.0
Duzib168G0459 Durio zibethinus HOM05D006939 ORTHO05D008616 5.8e-130 468.0 326 70.6
Manes.03G003600 Manihot esculenta HOM05D006939 ORTHO05D008616 1.0e-129 467.2 323 72.8
TAR369G0747 Trochodendron aralioides HOM05D006939 ORTHO05D008616 1.0e-129 467.2 318 73.3
TPR.G12361 Trifolium pratense HOM05D006939 ORTHO05D008616 1.3e-129 466.8 306 75.5
Glyma.04G075200 Glycine max HOM05D006939 ORTHO05D008616 2.9e-129 465.7 320 72.8
Sc09g0010200 Simmondsia chinensis HOM05D006939 ORTHO05D008616 2.9e-129 465.7 316 74.4
Gorai.009G068000 Gossypium raimondii HOM05D006939 ORTHO05D008616 3.8e-129 465.3 320 71.9
Gohir.A05G064600 Gossypium hirsutum HOM05D006939 ORTHO05D008616 6.5e-129 464.5 326 71.5
Lj1g0013260 Lotus japonicus HOM05D006939 ORTHO05D008616 6.5e-129 464.5 317 72.6
Gohir.D05G067200 Gossypium hirsutum HOM05D006939 ORTHO05D008616 8.4e-129 464.2 320 71.6
VMungo1309G0618 Vigna mungo HOM05D006939 ORTHO05D008616 1.1e-128 463.8 322 71.7
GSVIVG01035522001 Vitis vinifera HOM05D006939 ORTHO05D008616 1.1e-128 463.8 326 73.0
TWI63G0558 Tripterygium wilfordii HOM05D006939 ORTHO05D008616 2.5e-128 462.6 314 73.9
Atru.chr7.2637 Acer truncatum HOM05D006939 ORTHO05D008616 3.2e-128 462.2 322 71.7
CsaV3_2G031410 Cucumis sativus L. HOM05D006939 ORTHO05D008616 3.2e-128 462.2 323 74.6
Lj8C13T0 Lonicera japonica HOM05D006939 ORTHO05D008616 7.1e-128 461.1 318 73.3
MELO3C011191.2 Cucumis melo HOM05D006939 ORTHO05D008616 1.2e-127 460.3 323 74.0
Glyma.06G076400 Glycine max HOM05D006939 ORTHO05D008616 4.6e-127 458.4 322 72.4
Ciclev10008814m.g Citrus clementina HOM05D006939 ORTHO05D008616 6.0e-127 458.0 320 72.2
Medtr3g108805 Medicago truncatula HOM05D006939 ORTHO05D008616 7.9e-127 457.6 317 71.9
Cc02_g39540 Coffea canephora HOM05D006939 ORTHO05D008616 1.3e-126 456.8 324 71.9
arahy.Tifrunner.gnm1.ann1.8I4SMW Arachis hypogaea HOM05D006939 ORTHO05D008616 2.3e-126 456.1 320 72.5
Sed0018205 Sechium edule HOM05D006939 ORTHO05D008616 3.9e-126 455.3 319 73.4
arahy.Tifrunner.gnm1.ann1.WZEV1S Arachis hypogaea HOM05D006939 ORTHO05D008616 8.7e-126 454.1 320 72.2
Potri.018G005900 Populus trichocarpa HOM05D006939 ORTHO05D008616 2.8e-124 449.1 325 68.6
PGSC0003DMG400001838 Solanum tuberosum HOM05D006939 ORTHO05D008616 3.7e-124 448.7 327 70.3
AUR62009066 Chenopodium quinoa HOM05D006939 ORTHO05D008616 4.8e-124 448.4 319 69.6
Sabra18G0011600 Salix brachista HOM05D006939 ORTHO05D008616 1.1e-123 447.2 314 68.8
Sabra18G0014100 Salix brachista HOM05D006939 ORTHO05D008616 1.1e-123 447.2 314 68.8
CANSAT25G1759 Cannabis sativa HOM05D006939 ORTHO05D008616 2.4e-123 446.0 334 68.0
Hund19405 Selenicereus undatus HOM05D006939 ORTHO05D008616 3.1e-123 445.7 346 66.5
THA.LOC104814976 Tarenaya hassleriana HOM05D006939 ORTHO05D008616 5.3e-123 444.9 322 68.0
CAN.G1445.9 Capsicum annuum HOM05D006939 ORTHO05D008616 1.5e-122 443.4 319 70.8
Lalb_Chr08g0243571 Lupinus albus HOM05D006939 ORTHO05D008616 4.5e-122 441.8 320 71.6
MBI16_g38081_MAGBIO Magnolia biondii HOM05D006939 ORTHO05D008616 7.6e-122 441.0 325 70.2
Sopen08g026100 Solanum pennellii HOM05D006939 ORTHO05D008616 1.0e-121 440.7 327 68.8
Solyc08g077520.3 Solanum lycopersicum HOM05D006939 ORTHO05D008616 3.8e-121 438.7 327 68.5
Prupe.1G460400 Prunus persica HOM05D006939 ORTHO05D008616 1.2e-119 433.7 323 66.9
Actinidia06924 Actinidia chinensis HOM05D006939 ORTHO05D008616 2.1e-119 433.0 326 69.6
Psat5g025040 Pisum sativum HOM05D006939 ORTHO05D008616 2.7e-119 432.6 310 71.0
PSO063G0559 Papaver somniferum HOM05D006939 ORTHO05D008616 7.9e-119 431.0 322 66.1
PSO170G5391 Papaver somniferum HOM05D006939 ORTHO05D008616 7.9e-119 431.0 322 66.1
HanXRQChr12g0379171 Helianthus annuus HOM05D006939 ORTHO05D008616 1.0e-118 430.6 321 66.4
SalBow7G0985 Salvia bowleyana HOM05D006939 ORTHO05D008616 3.9e-118 428.7 327 68.2
AUR62020602 Chenopodium quinoa HOM05D006939 ORTHO05D008616 5.1e-118 428.3 302 70.2
CDE02G0224 Ceratophyllum demersum HOM05D006939 ORTHO05D008616 1.5e-117 426.8 314 66.9
ECA240G2907 Erigeron canadensis HOM05D006939 ORTHO05D008616 2.5e-117 426.0 315 67.3
Aqoxy7G02987 Aquilegia oxysepala HOM05D006939 ORTHO05D008616 3.3e-117 425.6 321 67.6
Migut.M00074 Erythranthe guttata HOM05D006939 ORTHO05D008616 6.3e-116 421.4 325 66.2
ClCG08G012690 Citrullus lanatus HOM05D006939 ORTHO05D008616 1.5e-114 416.8 323 69.3
HPP92_017403 Vanilla planifolia HOM05D006939 ORTHO05D008616 5.9e-114 414.8 316 64.9
Peaxi162Scf00084g00007 Petunia axillaris HOM05D006939 ORTHO05D008616 1.3e-113 413.7 309 70.2
RcHm_v2.0_Chr6g0304951 Rosa chinensis HOM05D006939 ORTHO05D008616 3.8e-113 412.1 320 64.1
vmacro04127 Vaccinium macrocarpon HOM05D006939 ORTHO05D008616 3.8e-113 412.1 264 76.5
MD15G1108100 Malus domestica HOM05D006939 ORTHO05D008616 1.4e-112 410.2 322 63.7
CiPaw.08G019500 Carya illinoinensis HOM05D006939 ORTHO05D008616 3.2e-112 409.1 323 66.9
CARHR202610 Cardamine hirsuta HOM05D006939 ORTHO05D008616 7.2e-112 407.9 310 65.5
Sp6g32750 Schrenkiella parvula HOM05D006939 ORTHO05D008616 1.2e-111 407.1 319 64.6
Aa31LG3G16420 Aethionema arabicum HOM05D006939 ORTHO05D008616 2.7e-111 406.0 328 62.8
DCAR_015445 Daucus carota HOM05D006939 ORTHO05D008616 6.1e-111 404.8 320 65.6
Oeu040447.1 Olea europaea HOM05D006939 ORTHO05D008616 1.0e-110 404.1 279 71.3
Rhsim13G0217600 Rhododendron simsii HOM05D006939 ORTHO05D008616 5.1e-110 401.7 412 53.6
MSTRG.14901 Avicennia marina HOM05D006939 ORTHO05D008616 2.5e-109 399.4 319 63.0
AL6G21250 Arabidopsis lyrata HOM05D006939 ORTHO05D008616 5.7e-109 398.3 323 61.3
C03p05420 Brassica napus HOM05D006939 ORTHO05D008616 5.7e-109 398.3 319 62.7
A03p04710 Brassica napus HOM05D006939 ORTHO05D008616 1.7e-108 396.7 319 62.7
BraA03t09811Z Brassica rapa HOM05D006939 ORTHO05D008616 1.7e-108 396.7 319 62.7
BcaB01g05506 Brassica carinata HOM05D006939 ORTHO05D008616 2.2e-108 396.4 319 62.7
Carub.0006s0918 Capsella rubella HOM05D006939 ORTHO05D008616 3.7e-108 395.6 321 63.6
SGA_v2.0_scaffold73G24476 Striga asiatica HOM05D006939 ORTHO05D008616 4.8e-108 395.2 322 65.2
BcaB01g06272 Brassica carinata HOM05D006939 ORTHO05D008616 1.4e-107 393.7 311 63.7
FvH4_2g36790 Fragaria vesca HOM05D006939 ORTHO05D008616 1.4e-107 393.7 312 63.5
Haze_21731 Corylus avellana HOM05D006939 ORTHO05D008616 4.1e-107 392.1 238 80.7
Lj8C69T1 Lonicera japonica HOM05D006939 ORTHO05D008616 6.9e-107 391.3 318 65.4
FAN20G0593 Fragaria x ananassa HOM05D006939 ORTHO05D008616 1.5e-106 390.2 320 61.9
FAN27G1343 Fragaria x ananassa HOM05D006939 ORTHO05D008616 1.5e-106 390.2 320 62.2
Zm00001eb048210 Zea mays HOM05D006939 ORTHO05D008616 7.7e-106 387.9 344 55.8
EL10Ac2g03752 Beta vulgaris HOM05D006939 ORTHO05D008616 3.8e-105 385.6 318 62.3
DCAR_026761 Daucus carota HOM05D006939 ORTHO05D008616 1.9e-104 383.3 322 63.0
unitig_61.g26486 Utricularia gibba HOM05D006939 ORTHO05D008616 2.1e-103 379.8 307 65.1
ATR0580G399 Amborella trichopoda HOM05D006939 ORTHO05D008616 4.7e-103 378.6 310 61.6
EL10Ac5g10928 Beta vulgaris HOM05D006939 ORTHO05D008616 4.7e-103 378.6 264 70.5
Nitab4.5_0006135g0050 Nicotiana tabacum HOM05D006939 ORTHO05D008616 4.7e-103 378.6 326 62.6
Thhalv10014111m.g Eutrema salsugineum HOM05D006939 ORTHO05D008616 1.0e-102 377.5 332 60.5
BolC3t13053H Brassica oleracea HOM05D006939 ORTHO05D008616 6.7e-102 374.8 302 63.2
Cfa013266 Carpinus fangiana HOM05D006939 ORTHO05D008616 6.7e-102 374.8 241 77.6
SGA_v2.0_scaffold49G18392 Striga asiatica HOM05D002257 ORTHO05D008616 8.2e-100 367.9 315 61.0
Nitab4.5_0001255g0030 Nicotiana tabacum HOM05D006939 ORTHO05D008616 7.7e-98 361.3 292 66.1
FAN15G1628 Fragaria x ananassa HOM05D006939 ORTHO05D008616 3.8e-97 359.0 309 59.9
AT5G10710 Arabidopsis thaliana HOM05D006939 ORTHO05D008616 2.8e-92 342.8 321 55.8
Lsat_1_v5_gn_5_46220 Lactuca sativa HOM05D006939 ORTHO05D008616 4.5e-82 308.9 315 55.9
Phvul.009G101000 Phaseolus vulgaris HOM05D006939 ORTHO05D008616 5.7e-77 292.0 197 73.1
SHI21120 Sapria himalayana HOM05D006939 ORTHO05D008616 1.8e-54 217.2 234 53.4
AagrBONN_evm.TU.Sc2ySwM_344.1051 Anthoceros agrestis HOM05D006939 ORTHO05D008616 8.4e-44 181.8 298 37.6
Aqoxy3G02235 Aquilegia oxysepala HOM05D006939 ORTHO05D008616 8.4e-44 181.8 140 65.0
AagrBONN_evm.TU.Sc2ySwM_228.595 Anthoceros agrestis HOM05D006939 ORTHO05D008616 2.4e-43 180.3 297 39.4
Pp3c6_9310 Physcomitrium patens HOM05D006939 ORTHO05D008616 4.6e-42 176.0 305 33.1
SMO119G0385 Selaginella moellendorffii HOM05D006939 ORTHO05D008616 3.9e-41 172.9 310 35.2
MD08G1128700 Malus domestica HOM05D006939 ORTHO05D008616 2.1e-39 167.2 236 44.5
Mapoly0042s0046 Marchantia polymorpha HOM05D006939 ORTHO05D008616 1.4e-38 164.5 302 34.4
Pp3c5_16590 Physcomitrium patens HOM05D006939 ORTHO05D008616 3.1e-38 163.3 313 30.0
BcaB01g06274 Brassica carinata HOM05D006939 ORTHO05D008616 3.8e-36 156.4 137 59.9
Aqoxy1G02501 Aquilegia oxysepala HOM05D006939 ORTHO05D008616 1.6e-34 151.0 247 41.3
MBI16_g27300_MAGBIO Magnolia biondii HOM05D006939 ORTHO05D008616 7.6e-29 132.1 183 43.7
CDE05G2180 Ceratophyllum demersum HOM05D006939 ORTHO05D008616 2.8e-23 113.6 137 47.4
COL.COLO4_19037 Corchorus olitorius HOM05D000039 ORTHO05D000870 3.4e-21 106.7 231 32.9
Os04g0284100 Oryza sativa ssp. japonica HOM05D006939 ORTHO05D008616 1.4e-19 101.3 78 64.1


User provided reference genes

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